prot_E-fasciculatus_F_contig13449.2587.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13449.2587.1
Unique Nameprot_E-fasciculatus_F_contig13449.2587.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length300
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13449.2587.1 vs. uniprot
Match: D7FH00_ECTSI (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH00_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 3.870e-125
Identity = 208/297 (70.03%), Postives = 230/297 (77.44%), Query Frame = 0 
Query:    4 SAATAAEVTSPAQNIPRRRPHLRHPRSAAPERPGGSPAAAAASTLGGDGGNVSGGFGQRRSLSENLEAYVESTEACASRMEYTLSQCDFQNRQTLEWSYGEGDSASDCETPLPEGGSLKCDHVEWNSGEGIAIGVLAGVGVAVSLCFWLALSRYKQSRVVRLGQPASCKTFVVGIGVTFLSILALLGATTDVTCALRLWGYSAGFDLAFCALTLKMRSACGAAETSMKQAYSMRLSRRMVLLLLLLDVAGDVAVLSRWTADDCGVEYESVGGGAFIRRNSCMACSNLLLWAWIALKV 300
            +AA AAE T PA++ PRRRPHLRH RSAAPERPGGS  A AA  LGGDGG+++ GF QRRSL E+LEAYV+S EACASRMEYTLSQCDFQNRQTLEWSYGEGD+A +CETPLPEGGS+KCDHVEW+SGEGIAIG+LAGVGVA+SLCFW ALSRYKQSRVVRLGQPA  KTFVVGIGVTFLSI ALLGATTD+TCALRLWGYSAGFDLAF ALTLKMRSAC AAE                                            SVGGGAFI R+SC++C++ L+W+WIALKV
Sbjct:    5 AAAAAAEATPPAESTPRRRPHLRHLRSAAPERPGGSLEAVAA-VLGGDGGSINDGFDQRRSLFEDLEAYVDSNEACASRMEYTLSQCDFQNRQTLEWSYGEGDNALNCETPLPEGGSVKCDHVEWSSGEGIAIGILAGVGVALSLCFWGALSRYKQSRVVRLGQPALSKTFVVGIGVTFLSIFALLGATTDLTCALRLWGYSAGFDLAFGALTLKMRSACSAAE--------------------------------------------SVGGGAFITRSSCVSCNHGLMWSWIALKV 256
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13449.2587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH00_ECTSI3.870e-12570.03G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 146..296
e-value: 1.1E-10
score: 41.7
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 132..218
score: 9.15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 259..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..298
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..300
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 132..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13449contigE-fasciculatus_F_contig13449:78..3475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13449.2587.1mRNA_E-fasciculatus_F_contig13449.2587.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13449 78..3475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13449.2587.1 ID=prot_E-fasciculatus_F_contig13449.2587.1|Name=mRNA_E-fasciculatus_F_contig13449.2587.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=300bp
APESAATAAEVTSPAQNIPRRRPHLRHPRSAAPERPGGSPAAAAASTLGG
DGGNVSGGFGQRRSLSENLEAYVESTEACASRMEYTLSQCDFQNRQTLEW
SYGEGDSASDCETPLPEGGSLKCDHVEWNSGEGIAIGVLAGVGVAVSLCF
WLALSRYKQSRVVRLGQPASCKTFVVGIGVTFLSILALLGATTDVTCALR
LWGYSAGFDLAFCALTLKMRSACGAAETSMKQAYSMRLSRRMVLLLLLLD
VAGDVAVLSRWTADDCGVEYESVGGGAFIRRNSCMACSNLLLWAWIALKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C