mRNA_E-fasciculatus_F_contig13410.2558.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: D8LDA6_ECTSI (Post-GPI attachment to proteins factor 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA6_ECTSI) HSP 1 Score: 358 bits (919), Expect = 4.180e-119 Identity = 201/269 (74.72%), Postives = 210/269 (78.07%), Query Frame = 3
Query: 63 MAPFSRAWFSWVALVAVGEASFGDRSWLYIDCLDNCVDKLCGIKYVREDQDLELKPSEVMRRDRLRRQLDEHLTQLRTLQQXXXXXXXXXXXXXXXXXXEKTGASGLRRRLEEGAGDAGGAGKTTAHVDHLHQLEPPAGSGA----------------EEGLGALSGGAEWANGGRRALSAAQDATGGEVNAGVAXXXXXXXXXXXXXXSDAVSAAVVDRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPFR 821
MAPFS WFSW ALVAVG+ASFGDRSWLYIDCLDNCVDKLCGIKYVREDQD ELK SEV RRDRLRR+LDEHLTQL+TLQQXXXXXXXXXXX EKTGASGLRRRLEEGAG+A G+ TAH DHL Q +PPAGSGA EEG+GAL GGAEWA+GGRRALSA QDATGGE AG S A S AVVDRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGD+WQYYGKWPFR
Sbjct: 1 MAPFSHVWFSWAALVAVGDASFGDRSWLYIDCLDNCVDKLCGIKYVREDQDPELKSSEVARRDRLRRRLDEHLTQLQTLQQXXXXXXXXXXXPTTAA--EKTGASGLRRRLEEGAGEASREGRGTAHRDHLPQRQPPAGSGAAAVGFGXXXXXXGDGAEEGVGALGGGAEWADGGRRALSAVQDATGGEGKAGAVGG------------SSAASVAVVDRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGDIWQYYGKWPFR 255
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: A0A6H5KP20_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP20_9PHAE) HSP 1 Score: 158 bits (399), Expect = 1.040e-44 Identity = 101/166 (60.84%), Postives = 110/166 (66.27%), Query Frame = 3
Query: 129 GDRSWLYIDCLDNCVDKLCGIKYVREDQDLELKPSEVMRRDRLRRQLDEHLTQLRTLQQXXXXXXXXXXXXXXXXXXEKTGASGLRRRLEEGAGDAGGAGKTTAHVDHLHQLEPPAGSG----------------AEEGLGALSGGAEWANGGRRALSAAQDATGG 578
GD+ L +D CVDKLCGIKYVREDQDLEL SEV RRDRLRR+LDEHLTQL+TLQQ EKTGASGLRRRLEEGA +A G+ AH DHL+Q +PPAGSG AEE LGAL GGAE A+GGRRALSA QDATGG
Sbjct: 13 GDQ--LLVDPCVICVDKLCGIKYVREDQDLELTSSEVARRDRLRRRLDEHLTQLQTLQQQRKAEQQQRSGPATAA--EKTGASGLRRRLEEGAREASREGRAAAHGDHLYQRQPPAGSGGAAVDFGSGSGSGGDRAEEDLGALGGGAERADGGRRALSAVQDATGG 174
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: A0A0F2LYN3_SPOSC (Post-GPI attachment to proteins factor 3 n=3 Tax=Sporothrix TaxID=29907 RepID=A0A0F2LYN3_SPOSC) HSP 1 Score: 61.6 bits (148), Expect = 2.700e-7 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 3
Query: 690 PWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPF 818
P+HLR++ WDC SEC TC + RLAAG D+ Q++GKWPF
Sbjct: 63 PFHLRLLLWDCASECDQTCQRIITGHRLAAGVDVVQFHGKWPF 105
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: A0A7M7J2M9_VARDE (Post-GPI attachment to proteins factor 3 n=6 Tax=Varroa TaxID=62624 RepID=A0A7M7J2M9_VARDE) HSP 1 Score: 60.8 bits (146), Expect = 5.900e-7 Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 3
Query: 666 VDRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPF 818
V R+ H PWHLR++GWDCE EC H CM V+ + + Q+ GKWPF
Sbjct: 86 VSRFEHRQPWHLRLLGWDCEDECGHQCMWKTVDY-FDSFDERVQFRGKWPF 135
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: A0A7M7J2Q4_VARDE (Post-GPI attachment to proteins factor 3 n=4 Tax=Varroa TaxID=62624 RepID=A0A7M7J2Q4_VARDE) HSP 1 Score: 60.5 bits (145), Expect = 7.580e-7 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 3
Query: 660 AVVDRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPF 818
+V+ R+ H PWHLR++GWDCE EC H CM V+ + + Q+ GKWPF
Sbjct: 64 SVLVRFEHRQPWHLRLLGWDCEDECGHQCMWKTVDY-FDSFDERVQFRGKWPF 115
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: A0A1L0FSJ8_9ASCO (Post-GPI attachment to proteins factor 3 n=2 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0FSJ8_9ASCO) HSP 1 Score: 59.3 bits (142), Expect = 1.900e-6 Identity = 18/44 (40.91%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 690 PWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPFR 821
PW+L+++GW+C S C + C + E R+ +++Q++GKWPFR
Sbjct: 74 PWYLKLLGWNCRSNCDYQCQQIVTEERIKNNQEVYQFHGKWPFR 117
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: H8X7Y6_CANO9 (Post-GPI attachment to proteins factor 3 n=1 Tax=Candida orthopsilosis (strain 90-125) TaxID=1136231 RepID=H8X7Y6_CANO9) HSP 1 Score: 59.3 bits (142), Expect = 1.930e-6 Identity = 22/59 (37.29%), Postives = 34/59 (57.63%), Query Frame = 3
Query: 669 DRYVHNP---------PWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPF 818
D Y +NP PWHLR++GW C+S C + C + + R +++Q++GKWPF
Sbjct: 63 DLYYYNPNWQFVEMPLPWHLRLLGWTCQSNCDYQCQRVITDERKKHDEEIYQFHGKWPF 121
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: UPI00026597BC (post-GPI attachment to proteins factor 3 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026597BC) HSP 1 Score: 55.8 bits (133), Expect = 2.480e-5 Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 3
Query: 666 VDRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPF 818
+ R+ PWHL+++GWDCE EC H CM V+ A + Q+ GKWPF
Sbjct: 53 LSRFHRTQPWHLQLLGWDCEDECGHQCMWKAVDY-FEAFEERVQFRGKWPF 102
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: M3JUG4_CANMX (Post-GPI attachment to proteins factor 3 n=1 Tax=Candida maltosa (strain Xu316) TaxID=1245528 RepID=M3JUG4_CANMX) HSP 1 Score: 55.8 bits (133), Expect = 2.690e-5 Identity = 18/43 (41.86%), Postives = 30/43 (69.77%), Query Frame = 3
Query: 690 PWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPF 818
P+HLR++GW+CES C + C + R+ +++Q++GKWPF
Sbjct: 79 PFHLRLLGWNCESNCDYQCQRVITAERVRHNEEIYQFHGKWPF 121
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Match: A0A1W0X2U4_HYPDU (Post-GPI attachment to proteins factor 3 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0X2U4_HYPDU) HSP 1 Score: 55.5 bits (132), Expect = 3.140e-5 Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 3
Query: 669 DRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGDMWQYYGKWPF 818
D + N PW+L+++ W+CE ECK++CM VE + Q+YGKWPF
Sbjct: 60 DDWSRNQPWYLKLLVWECEDECKYSCMWEVVEIFQKNDRAVPQFYGKWPF 109 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13410.2558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13410.2558.1 >prot_E-fasciculatus_F_contig13410.2558.1 ID=prot_E-fasciculatus_F_contig13410.2558.1|Name=mRNA_E-fasciculatus_F_contig13410.2558.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=254bp MAPFSRAWFSWVALVAVGEASFGDRSWLYIDCLDNCVDKLCGIKYVREDQback to top mRNA from alignment at E-fasciculatus_F_contig13410:185..2211- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13410.2558.1 ID=mRNA_E-fasciculatus_F_contig13410.2558.1|Name=mRNA_E-fasciculatus_F_contig13410.2558.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2027bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13410:185..2211- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13410:185..2211- >mRNA_E-fasciculatus_F_contig13410.2558.1 ID=mRNA_E-fasciculatus_F_contig13410.2558.1|Name=mRNA_E-fasciculatus_F_contig13410.2558.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1524bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13410:185..2211- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |