mRNA_E-fasciculatus_F_contig13392.2540.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13392.2540.1
Unique NamemRNA_E-fasciculatus_F_contig13392.2540.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: A0A6H5KHW4_9PHAE (Prohibitin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW4_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 4.470e-110
Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQ+RAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSER+KYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR
Sbjct:   89 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERSKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 264
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: D7G0Y3_ECTSI (Prohibitin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y3_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 4.700e-109
Identity = 172/178 (96.63%), Postives = 177/178 (99.44%), Query Frame = 1 
Query:    4 FQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARY 537
            + SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKA+GEAQSAKLVGEAIKDNPGFIQLRRIDAA++IASTVAR+
Sbjct:  126 YDSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAEGEAQSAKLVGEAIKDNPGFIQLRRIDAAKEIASTVARF 303
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: A0A7S2XX85_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX85_9STRA)

HSP 1 Score: 263 bits (671), Expect = 9.940e-86
Identity = 137/176 (77.84%), Postives = 161/176 (91.48%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QSLTGSKDLQMV++TLRVL+KPDP  L FIYRRLG DYDERVLPSIVNEV+K+VVA+YNASELLTKREAVS+ +   L +RA DFGI+++D +ITHLSFSREYTAAVEAKQVAQQD+ERAKYVV+KA QEK SI++KAQGEAQSA+LVG+AI+DNPGF+QLR IDAARDI++ VA+
Sbjct:   92 QSLTGSKDLQMVNLTLRVLSKPDPNNLHFIYRRLGIDYDERVLPSIVNEVSKSVVARYNASELLTKREAVSREVASLLTKRARDFGILLDDVSITHLSFSREYTAAVEAKQVAQQDAERAKYVVDKAIQEKRSIILKAQGEAQSAELVGKAIRDNPGFVQLRMIDAARDISTIVAK 267
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BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: A0A6T5MRB1_HETAK (Prohibitin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MRB1_HETAK)

HSP 1 Score: 262 bits (669), Expect = 2.580e-85
Identity = 134/176 (76.14%), Postives = 161/176 (91.48%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QSLTGSKDLQMV+ITLRVL+KP+P  LP IYRRLG DYDERVLPSIVNEVTK+VVA+YNASELLTKREAVS+ +   L  RA DFGI+++D +ITHLSFSREYT AVEAKQVAQQD+ERAKYVV+KA+QEK+SIV+KAQGEA++A+L+G AI+DNPGF+QLR+IDAA++IA T+A+
Sbjct:   90 QSLTGSKDLQMVNITLRVLSKPNPATLPMIYRRLGTDYDERVLPSIVNEVTKSVVARYNASELLTKREAVSREVAQRLMARARDFGILLDDVSITHLSFSREYTNAVEAKQVAQQDAERAKYVVDKAKQEKLSIVLKAQGEAEAAQLIGTAIQDNPGFVQLRKIDAAKEIAETLAK 265
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BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: A0A835Z7Y4_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y4_9STRA)

HSP 1 Score: 253 bits (646), Expect = 6.370e-82
Identity = 134/175 (76.57%), Postives = 160/175 (91.43%), Query Frame = 1 
Query:   10 SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            +LTGSKDLQMV++TLRVL KP+  +LPFIYRRL ++YD+RVLPSI+NEV KAVVAKYNASELLTKRE VSK+IR+AL  RA DF I ++D AITHL+FSREYTAA+EAKQVAQQD+ERAKYVV KA QEKMSIV+KA+GEA+SA L+G+AIKDNPGF+QLRRIDAAR+IA+TV++
Sbjct:   92 TLTGSKDLQMVNVTLRVLHKPNLTQLPFIYRRLHQNYDDRVLPSIINEVLKAVVAKYNASELLTKREDVSKSIREALTLRARDFMIELDDVAITHLAFSREYTAAIEAKQVAQQDAERAKYVVMKAVQEKMSIVLKAKGEAESAALIGKAIKDNPGFLQLRRIDAAREIATTVSK 266
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BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: A0A7S3NH81_9STRA (Prohibitin n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NH81_9STRA)

HSP 1 Score: 252 bits (643), Expect = 5.940e-81
Identity = 131/176 (74.43%), Postives = 158/176 (89.77%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QSLTGSKDLQM++ITLRVL+KP    LPFIY+RLG DYD+RVLPSIVNEVTKAVVA YNASELLTKRE VS+ IR+ L RR+ DF IV+ED +ITHLSFS EYTAAVEAKQVAQQD+ER++Y+VEKA QEK SI++KA+GEAQSA L+G+AI++NPGF+QLR+I+ A++IAST+AR
Sbjct:  108 QSLTGSKDLQMINITLRVLSKPSIPDLPFIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSQEIRNRLLRRSADFRIVLEDVSITHLSFSSEYTAAVEAKQVAQQDAERSRYIVEKAIQEKKSIIVKAEGEAQSATLIGKAIQNNPGFVQLRKIETAKEIASTIAR 283
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BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: A0A7S3ZNB9_9STRA (Prohibitin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNB9_9STRA)

HSP 1 Score: 249 bits (637), Expect = 3.880e-80
Identity = 131/176 (74.43%), Postives = 158/176 (89.77%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QSLTGSKDLQMV++TLRVL  P+  +LP+IY  LG DYD+RVLPSIVNEVTKAVVA+YNASELLTKREAVS  IR AL +RA DF IV++D A+THLSFS EYTAAVEAKQVAQQ++ERA+YVVEKA QEK SI++KA+GEA+SA+LVG+AI+DNPGF++LR+ID A++IA+TVAR
Sbjct:  114 QSLTGSKDLQMVNVTLRVLFYPNKQELPWIYTMLGHDYDDRVLPSIVNEVTKAVVARYNASELLTKREAVSNEIRYALTKRAADFRIVLDDFALTHLSFSNEYTAAVEAKQVAQQEAERARYVVEKAIQEKKSIIVKAEGEAESARLVGKAIQDNPGFVKLRKIDTAKEIATTVAR 289
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BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: F0XYI2_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI2_AURAN)

HSP 1 Score: 248 bits (633), Expect = 1.190e-79
Identity = 130/176 (73.86%), Postives = 156/176 (88.64%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QSLTGSKDLQMV+ITLRVL+KP+  +L +IY+RLG DYD+RVLPSIVNEVTKAVVA YNASELLTKRE VS  IR  L  RA DF I+++D +ITHLSFS EYTAAVEAKQVAQQDSERA+Y+VEKA QEK SI++KA+GEAQSA+L+G+AI++NPGF++LR+ID A++IA TVAR
Sbjct:  106 QSLTGSKDLQMVNITLRVLSKPNTSELAWIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSNEIRHRLVVRAADFRIILDDVSITHLSFSHEYTAAVEAKQVAQQDSERARYIVEKAIQEKKSIIVKAEGEAQSARLIGKAIQNNPGFVKLRKIDTAKEIAGTVAR 281
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BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: R1EXU2_EMIHU (Prohibitin n=3 Tax=Eukaryota TaxID=2759 RepID=R1EXU2_EMIHU)

HSP 1 Score: 242 bits (618), Expect = 1.390e-77
Identity = 124/176 (70.45%), Postives = 157/176 (89.20%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QSLTGSKDLQMV+I+LRVL++PDP  LP IYR LG DYDERVLPSIVNEV K+VVA+YNAS+L+T+REAVS+ IR  L  RA +F + ++D +ITHLSF +EYTAAVEAKQVAQQ++ERAK+VV+KA+QEK S VIKAQGEA+SAKL+G+A++DNPG+IQLRR++AARD+A T+++
Sbjct:   95 QSLTGSKDLQMVNISLRVLSRPDPGFLPTIYRELGTDYDERVLPSIVNEVLKSVVAQYNASQLITQREAVSQRIRTDLLSRAREFHLELDDVSITHLSFGKEYTAAVEAKQVAQQEAERAKFVVDKAKQEKKSTVIKAQGEAKSAKLIGDAVRDNPGYIQLRRLEAARDVAGTLSK 270
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Match: A0A7S3BG24_9EUKA (Prohibitin n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BG24_9EUKA)

HSP 1 Score: 242 bits (618), Expect = 1.730e-77
Identity = 125/176 (71.02%), Postives = 156/176 (88.64%), Query Frame = 1 
Query:    7 QSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 534
            QS+TGSKDLQMV+I+LRVL+KPD   LP IYR LG DYDERVLPSIVNEV K+VVA YNA++L+T RE VS  IR AL +RA DF +V+ED +ITHLSF +EYTAAVEAKQVAQQD+ER++++V++A QEK S+VIKA+GEA+SAKL+G+AIKDNPGFIQLR+++AARDIA+TV++
Sbjct:   94 QSMTGSKDLQMVNISLRVLSKPDVAHLPQIYRELGTDYDERVLPSIVNEVLKSVVAHYNAAQLITMRETVSARIRQALIKRATDFHLVLEDVSITHLSFGKEYTAAVEAKQVAQQDAERSRFIVDRAVQEKKSMVIKAEGEAKSAKLIGDAIKDNPGFIQLRKLEAARDIATTVSK 269
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13392.2540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHW4_9PHAE4.470e-11098.86Prohibitin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7G0Y3_ECTSI4.700e-10996.63Prohibitin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S2XX85_9STRA9.940e-8677.84Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
A0A6T5MRB1_HETAK2.580e-8576.14Prohibitin n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A835Z7Y4_9STRA6.370e-8276.57Prohibitin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S3NH81_9STRA5.940e-8174.43Prohibitin n=1 Tax=Aureoumbra lagunensis TaxID=440... [more]
A0A7S3ZNB9_9STRA3.880e-8074.43Prohibitin n=1 Tax=Pelagomonas calceolata TaxID=35... [more]
F0XYI2_AURAN1.190e-7973.86Prohibitin n=1 Tax=Aureococcus anophagefferens Tax... [more]
R1EXU2_EMIHU1.390e-7770.45Prohibitin n=3 Tax=Eukaryota TaxID=2759 RepID=R1EX... [more]
A0A7S3BG24_9EUKA1.730e-7771.02Prohibitin n=1 Tax=Haptolina ericina TaxID=156174 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13392contigE-fasciculatus_F_contig13392:9..2972 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.5
Seed ortholog evalue1.6e-86
Seed eggNOG ortholog2880.D7G0Y3
Preferred namePHB2
KEGG koko:K17081
GOsGO:0000001,GO:0000003,GO:0000060,GO:0000819,GO:0001101,GO:0001302,GO:0001666,GO:0001763,GO:0001932,GO:0001934,GO:0002009,GO:0002082,GO:0003006,GO:0003008,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005773,GO:0005774,GO:0005911,GO:0006140,GO:0006355,GO:0006457,GO:0006606,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007049,GO:0007059,GO:0007062,GO:0007088,GO:0007096,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008285,GO:0008406,GO:0009506,GO:0009507,GO:0009536,GO:0009611,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016363,GO:0017038,GO:0019219,GO:0019220,GO:0019222,GO:0019866,GO:0019867,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022612,GO:0023051,GO:0023056,GO:0023057,GO:0030001,GO:0030054,GO:0030154,GO:0030162,GO:0030312,GO:0030331,GO:0030421,GO:0030879,GO:0030964,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031536,GO:0031647,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033218,GO:0033365,GO:0033554,GO:0033599,GO:0033600,GO:0033993,GO:0034220,GO:0034399,GO:0034504,GO:0034613,GO:0035239,GO:0035257,GO:0035258,GO:0035295,GO:0035632,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042695,GO:0042886,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043410,GO:0043433,GO:0043467,GO:0044092,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044703,GO:0045136,GO:0045137,GO:0045184,GO:0045271,GO:0045787,GO:0045840,GO:0045861,GO:0045892,GO:0045927,GO:0045931,GO:0045934,GO:0045937,GO:0046543,GO:0046907,GO:0047485,GO:0048232,GO:0048308,GO:0048311,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048729,GO:0048731,GO:0048732,GO:0048754,GO:0048856,GO:0048869,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050896,GO:0051090,GO:0051091,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051427,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0055044,GO:0055085,GO:0060255,GO:0060259,GO:0060429,GO:0060443,GO:0060444,GO:0060548,GO:0060562,GO:0060603,GO:0060688,GO:0060744,GO:0060749,GO:0060762,GO:0061138,GO:0061180,GO:0061377,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070372,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070727,GO:0070838,GO:0070887,GO:0071229,GO:0071300,GO:0071310,GO:0071396,GO:0071453,GO:0071456,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072511,GO:0072594,GO:0080090,GO:0090068,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0098813,GO:1900542,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902806,GO:1902808,GO:1903506,GO:1903507,GO:1903578,GO:1903998,GO:1905330,GO:1990204,GO:2000026,GO:2000027,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.thelarche
EggNOG OGsCOG0330@1,KOG3090@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04147
Hectar predicted targeting categoryother localisation
Exons5
Model size537
Cds size537
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13392.2540.1prot_E-fasciculatus_F_contig13392.2540.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13392 9..2972 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927839.232612-CDS-E-fasciculatus_F_contig13392:8..1231622927839.232612-CDS-E-fasciculatus_F_contig13392:8..123Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 9..123 +
1695995717.4323487-CDS-E-fasciculatus_F_contig13392:8..1231695995717.4323487-CDS-E-fasciculatus_F_contig13392:8..123Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 9..123 +
1622927839.290711-CDS-E-fasciculatus_F_contig13392:851..9461622927839.290711-CDS-E-fasciculatus_F_contig13392:851..946Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 852..946 +
1695995717.4496427-CDS-E-fasciculatus_F_contig13392:851..9461695995717.4496427-CDS-E-fasciculatus_F_contig13392:851..946Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 852..946 +
1622927839.3042614-CDS-E-fasciculatus_F_contig13392:1509..16381622927839.3042614-CDS-E-fasciculatus_F_contig13392:1509..1638Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 1510..1638 +
1695995717.459787-CDS-E-fasciculatus_F_contig13392:1509..16381695995717.459787-CDS-E-fasciculatus_F_contig13392:1509..1638Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 1510..1638 +
1622927839.3161285-CDS-E-fasciculatus_F_contig13392:2118..21781622927839.3161285-CDS-E-fasciculatus_F_contig13392:2118..2178Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 2119..2178 +
1695995717.4712877-CDS-E-fasciculatus_F_contig13392:2118..21781695995717.4712877-CDS-E-fasciculatus_F_contig13392:2118..2178Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 2119..2178 +
1622927839.3259244-CDS-E-fasciculatus_F_contig13392:2834..29721622927839.3259244-CDS-E-fasciculatus_F_contig13392:2834..2972Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 2835..2972 +
1695995717.482007-CDS-E-fasciculatus_F_contig13392:2834..29721695995717.482007-CDS-E-fasciculatus_F_contig13392:2834..2972Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13392 2835..2972 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13392.2540.1

>prot_E-fasciculatus_F_contig13392.2540.1 ID=prot_E-fasciculatus_F_contig13392.2540.1|Name=mRNA_E-fasciculatus_F_contig13392.2540.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp
FFQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVN
EVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLS
FSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLV
GEAIKDNPGFIQLRRIDAARDIASTVARY
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mRNA from alignment at E-fasciculatus_F_contig13392:9..2972+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13392.2540.1 ID=mRNA_E-fasciculatus_F_contig13392.2540.1|Name=mRNA_E-fasciculatus_F_contig13392.2540.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2964bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13392:9..2972+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTTTTCAGTCGCTAACGGGGTCAAAGGACTTGCAAATGGTGAGCATCAC
CCTCCGTGTGCTGACCAAGCCGGACCCCTTCAAGCTCCCCTTCATCTACC
GCAGGTTGGGCAAGGGTAAGTGTTGTCCTCGTCTTGTCGTCCCATCTCTC
CCTCTGTCTTCCTCTGCCGTAAAAGATTATCACGAGTGGCCGAGGTCGAG
CATCTCCCCGACACTGCCAACGGGTGCCCACTATAGATGTAGATGTGTCA
AGCGCTGAAACCCGCTACACACTTTTTTGCGTTGAACCATCCTGGTTATC
CCGCTTTTTTTTTGTGCGATAAACCATCCTGGTTACTCCATCTGTGCTCT
GTGCCAGCCTTCTTCACCGGCACTACTACAGGACACCCGAGTGCACTGTT
GCGTCGAGCAGTTTGTTTTTTCTGTATGTGTGCCTGGCCGTGTTGCTTCG
ATTCGTCGCCCGTGGCTGCTGCCGTGCATGGTCCGGGTAACCGATAGCGT
GGACGACCGCAGTGTCTGCAGCCGCAGAAAGTGGATTGGGATTGCAAGAG
CCTCCTTTTTTTTTTTTTTGGCAGGTGCACCCCTGTTTCGGCTCCGCTCC
GCTTCTCAAACCATCCTTGATTCGCCCTTTTGCCACCGCCTGTTGCTGCT
GCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGTGTGTGTGTGTTTTTG
TACCGCTTTGTGTCATGCTACTACGGCCGCTGCGCTGCCGCTGCTGCTGC
TGGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTCGTGTCT
CGGGGGTCGTCTTGGGGGTACTTGCTTCCATTCCTTGGACCAGACTACGA
CGAGCGCGTCCTGCCGTCCATCGTGAACGAGGTGACCAAGGCCGTCGTCG
CCAAGTACAACGCCTCCGAGCTCCTCACTAAGCGAGAGGTGGGTTTGAGT
CTCAACCGACGCTTTTGCGCTTGCCCCCCCCTTGACTGCTTCACACAGAC
GTCCCAAACCTGAGATGCCTCCCCGCCCATTGGAGAAACGGAAAGAGCCC
CAACATGCGGATAGTGGTTTCGTCGGCGGCATTTGGCTCCATGCTTTTCA
GTGCTCTGTGCAAGTTGGCTCGTGTTATTCATTAATAGCAGTTCGTTGCA
TCAAGGTGGCAACGAAAAAACAATCTCGCCGTGTATCGAGAAATCCAGTA
AAGCATTGCATTTTGATCAGAGCAAGAAAGAGGGATGGTTATAGGGATAG
GGGTTCGTGACTACACGGGGCGGGGCGCCGTTTGTCTTGCGCCTTCGTTT
TTTTTTCACGTCGCGTCCGTCCATGTCCATCCCACGTTCACGAGGCGTTC
TTCTTGTTCTTTTCGGGATCAGTTTTTTCTTCAGGTGCCCTCGTTCCGAA
GACGTGCCCCACGCCTTTGACTCTCGCCCACATCCATCGATCCCGGCGTT
AGCTTGGTCGTTGTTTCATTTTTTTTCACTTTTTTATTTTTTTTCTTGCA
GGCCGTGTCCAAGAACATCCGGGACGCGCTGCAGAGGCGGGCGGGGGACT
TCGGCATCGTGATGGAGGACACCGCCATCACCCACCTCAGCTTCAGCAGA
GAGTACACGGCTGCCGTCGAGGCCAAGCAGGTAGGTGGCAGCGATCGACT
GACATACGCCGCGATGTAGTAGTTGAGAATCAGAAGAATCCAACCCTCGT
TCAGGCGAAACAGGTGCGATTGTTTGAACATAGAAAATTGCGATACTTTC
TTTGTCCAACCTTATGCGAGCCTCAATTCCGAAGTCCCCCAAGTTATCTG
GTGGTGGCGTCTTCATTACGACGCTATTTAGTGTCATCGAGAGAATGGTC
ACGGGGCAGTGCCGGCCCAAAACTCTGTTCTTTTGACTTGCTGCTTCTGT
CTCATGTTCGATTGCCCCCCCCTATACCTCAACCGCTCGGTGGGCCTTGA
TTTTTCCAAGTCAAATTACATAAAACCCCGTTCACGCCTGATTGCCGTGT
TTCTTCTCTGTTCTTGGCCGCCCTTATCGCAACCATTCGGCGAGAGATTT
GGTTTTTTCCGAGGCACAGAAGGATAACCCCGCGCACGTCGTCTGATTTG
CCCCCAACAGGTTGCCCAACAAGACTCGGAGCGTGCCAAGTACGTCGTGG
AGAAGGCTCGCCAGGAGAAGGTGAAGGGGGGCACAGTGGAGTCATTTTCA
CTTTTTTTTGGGGCGGGGGGGGTCAGAGGAACGAGGACCGGGGACCGAAG
CAAGTTGAATATGTTGCCGTGTTTTTCACGGTGTGGCCACCTCATGCCGG
TGGCCAGCTGGTTCCGAGGGTGCTTGGGTTGTCGTCCCCGTGTGTGGTAG
TGCTGCTGGTGGTAGTGGTGATCGGGGCAAGCCTTCCTACGCAAAGCAAT
TGGTGCGTTTTTATTTATGAGGCAAGGCTTATGTAGATGCTAACCCCGTA
CCCCCGGAAATTCCATCTATTTCATACTTTGCCCCCAGATGTTTGCTTCA
CGAAACCCTGCCTACACTACTGTTGTCGGGGCATGTTTTTCACAGGTGGC
GCTTGCGGCGATGAAGCAGCAGACGAAAATGGCTGAACAGCCGCTGGTTG
GGCCACAGAACTTGCAGAAGAAAATTTAGCCCGACCCGACCCCACCCCGC
CAAATTGACGTCACATTTGTTGCCCCTATCGCTGCCGCTGTATGCGGGAT
TCGCGATATTTCTCACCTGATACAGGCAGCCGACAGTCGTGTGTCACCCC
GAAGTGTTCTCAAACGTGGAACGTACCTTTCTCTGTGCACCTCTATGCAC
GGTTCTTCCCCCCTCCTTCTATATAGATGAGCATCGTGATCAAGGCACAG
GGAGAGGCGCAATCGGCCAAGCTGGTCGGAGAGGCCATCAAGGACAACCC
CGGGTTCATCCAGCTCCGACGCATTGACGCGGCGAGGGACATCGCGTCCA
CCGTGGCAAGGTAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13392:9..2972+

>mRNA_E-fasciculatus_F_contig13392.2540.1 ID=mRNA_E-fasciculatus_F_contig13392.2540.1|Name=mRNA_E-fasciculatus_F_contig13392.2540.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1074bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13392:9..2972+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTTTTCAGTCGCTAACGGGGTCAAAGGACTTGCAAATGGTGAGCATCAC
CCTCCGTGTGCTGACCAAGCCGGACCCCTTCAAGCTCCCCTTCATCTACC
GCAGGTTGGGCAAGGTTTTTTCAGTCGCTAACGGGGTCAAAGGACTTGCA
AATGGTGAGCATCACCCTCCGTGTGCTGACCAAGCCGGACCCCTTCAAGC
TCCCCTTCATCTACCGCAGGTTGGGCAAGGACTACGACGAGCGCGTCCTG
CCGTCCATCGTGAACGAGGTGACCAAGGCCGTCGTCGCCAAGTACAACGC
CTCCGAGCTCCTCACTAAGCGAGAGACTACGACGAGCGCGTCCTGCCGTC
CATCGTGAACGAGGTGACCAAGGCCGTCGTCGCCAAGTACAACGCCTCCG
AGCTCCTCACTAAGCGAGAGGCCGTGTCCAAGAACATCCGGGACGCGCTG
CAGAGGCGGGCGGGGGACTTCGGCATCGTGATGGAGGACACCGCCATCAC
CCACCTCAGCTTCAGCAGAGAGTACACGGCTGCCGTCGAGGCCAAGCAGG
CCGTGTCCAAGAACATCCGGGACGCGCTGCAGAGGCGGGCGGGGGACTTC
GGCATCGTGATGGAGGACACCGCCATCACCCACCTCAGCTTCAGCAGAGA
GTACACGGCTGCCGTCGAGGCCAAGCAGGTTGCCCAACAAGACTCGGAGC
GTGCCAAGTACGTCGTGGAGAAGGCTCGCCAGGAGAAGGTTGCCCAACAA
GACTCGGAGCGTGCCAAGTACGTCGTGGAGAAGGCTCGCCAGGAGAAGAT
GAGCATCGTGATCAAGGCACAGGGAGAGGCGCAATCGGCCAAGCTGGTCG
GAGAGGCCATCAAGGACAACCCCGGGTTCATCCAGCTCCGACGCATTGAC
GCGGCGAGGGACATCGCGTCCACCGTGGCAAGGTACATGAGCATCGTGAT
CAAGGCACAGGGAGAGGCGCAATCGGCCAAGCTGGTCGGAGAGGCCATCA
AGGACAACCCCGGGTTCATCCAGCTCCGACGCATTGACGCGGCGAGGGAC
ATCGCGTCCACCGTGGCAAGGTAC
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