mRNA_E-fasciculatus_F_contig13368.2523.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A6H5LAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU0_9PHAE) HSP 1 Score: 312 bits (800), Expect = 4.650e-105 Identity = 168/185 (90.81%), Postives = 171/185 (92.43%), Query Frame = 1
Query: 1 QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAXXXXXXXXXXGKRGAATSKRGVKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 555
QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAW TAA +GAA SKRG+KRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQR+FDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ
Sbjct: 122 QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWTTAAAAAPPVVAG---KGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 303
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: D7FZL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL4_ECTSI) HSP 1 Score: 309 bits (792), Expect = 4.050e-102 Identity = 168/184 (91.30%), Postives = 171/184 (92.93%), Query Frame = 1
Query: 1 QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAXXXXXXXXXXGKRGAATSKRGVKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 552
QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAA +RGAA SKRG+KRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQR+FDTMLAKNPGLSSLASTAVRSANLYVGSLTIVD LRYVGVQ
Sbjct: 246 QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAAAAPPVVV---ERGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDGLRYVGVQ 426
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A836CF64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF64_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.850e-34 Identity = 82/183 (44.81%), Postives = 104/183 (56.83%), Query Frame = 1
Query: 4 KFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAXXXXXXXXXXGKRGAATSKRGVKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 552
+F+ +CPSNAFQ+VVA + +S+A+RGAAL+ PMP+LFVIGFGA AGYGL + S R A VK + A P+ S LA+G FLAV +NLRYQ IAG +EQR D LA P +S+ S +R+ANLY+G+ IVDWLR VGVQ
Sbjct: 64 RFMNSCPSNAFQRVVAP---ATHYSLAQRGAALIKPMPQLFVIGFGACAAGYGLTS---LMSHIRLALDPTM-----------------VKNTEDA--------------PIFKSSLAIGAFLAVSSNLRYQIIAGGIEQRFLDVALASKPAVSNACSFVLRTANLYLGASMIVDWLRIVGVQ 209
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A7S3XYV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV0_HETAK) HSP 1 Score: 83.2 bits (204), Expect = 8.830e-16 Identity = 58/186 (31.18%), Postives = 88/186 (47.31%), Query Frame = 1
Query: 1 QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAXXXXXXXXXXGKRGAATSKRGVKRAQKARAAALAEEAQKPP---VPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGV 549
++F +CP NAFQKV F+VA+R L+ P+LF++GF A++AG+G GL K +K A+ EE P V VL L +G +L V TN+RYQ +AG +E+R+ + A L++ S R+ N +VGS +V L++ G+
Sbjct: 144 KRFFDSCPGNAFQKVTPGRA---PFTVAQRCGTLVGAFPQLFLVGFAASVAGFGFTLGLS-------------------------------KLREKLNPASAEEEPLGGPAKEVQVLKPALVIGAYLGVSTNVRYQLVAGLLEERLLGALFANQQFLNTAGSFIFRTGNTFVGSSQMVMTLKWTGL 295
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A830HVM6_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HVM6_9CHLO) HSP 1 Score: 84.0 bits (206), Expect = 1.420e-15 Identity = 63/191 (32.98%), Postives = 91/191 (47.64%), Query Frame = 1
Query: 7 FLAACPSNAFQKVV-----AEGGV----SKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAXXXXXXXXXXGKRGAATSKRGVKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 552
F + P+NAF+KVV A GG + +A R A+L KLF +GF ++ G + F A R AA GK+G ++ V + ++A L G+++A +NLRYQ +AG VEQR+ M A N GL S ST +R N ++GSL VD++R G+Q
Sbjct: 305 FWSRVPNNAFEKVVKTKAQASGGAVMLSTPEMGIAMRSCAILKNGSKLFAVGFASSCIG----VTITNFFAERKAAAEAAKKLPEKGKKGKKAPEKEVVKQDLGKSAVL-----------------YGIYMATSSNLRYQLLAGVVEQRLLKAMFATNQGLQSSISTVLRIGNTFIGSLLWVDFVRMTGLQ 474
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A7S1EMP3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EMP3_HEMAN) HSP 1 Score: 77.0 bits (188), Expect = 1.540e-13 Identity = 35/69 (50.72%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 349 GLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 555
G+AVG ++A+ +NLRYQF+AG +EQRV DT+LA L + ST +R+AN Y+GS +V +LR++G+Q+
Sbjct: 216 GVAVGAYVAISSNLRYQFMAGVLEQRVLDTLLAGQVSLRTAGSTVIRTANTYLGSYLLVAYLRWLGLQK 284
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A6A3CDE4_HIBSY (Putative poly(P)/ATP NAD kinase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CDE4_HIBSY) HSP 1 Score: 73.9 bits (180), Expect = 1.890e-13 Identity = 36/83 (43.37%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 307 AEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 555
AEE + VP+L + +A G+++A+ +NLRYQ +AG +EQR+ + +L K+ + S AVR+ N Y+GSL +VD+ R VG+Q+
Sbjct: 59 AEEVEN--VPILSTSVAYGVYMAISSNLRYQVLAGVIEQRMLEPLLHKHKLMLSAICFAVRTGNTYLGSLLLVDYARLVGIQK 139
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A2K1L860_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L860_PHYPA) HSP 1 Score: 77.4 bits (189), Expect = 2.420e-13 Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 313 EAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 555
E + +P+L + LA G+++AV +NLRYQ +AG VEQR+ + ML L S+ S AVR+ N ++GSL VD+ R+VGVQ+
Sbjct: 318 EGESEDIPILQTSLAYGVYMAVSSNLRYQILAGVVEQRILEPMLHNQKLLLSVMSFAVRTGNTFLGSLMWVDYARWVGVQK 398
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A2N9GNZ8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GNZ8_FAGSY) HSP 1 Score: 74.7 bits (182), Expect = 2.930e-13 Identity = 35/74 (47.30%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 331 VPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 552
VP+L + A G+++A+ +NLRYQ +AG +EQR+ + ML ++ S AS AVR+ N Y+GSL VD+ R++GVQ
Sbjct: 130 VPILSTSAAYGVYMAISSNLRYQVLAGVIEQRILEPMLHRHKLWLSAASFAVRTGNTYLGSLLWVDYARWIGVQ 203
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Match: A0A2K1L326_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L326_PHYPA) HSP 1 Score: 77.0 bits (188), Expect = 3.220e-13 Identity = 37/81 (45.68%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 313 EAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRVFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 555
E + +P+L + LA G+++AV +NLRYQ +AG VEQR+ + ML L S+ S A+R+ N ++GSL VD+ R+VGVQ+
Sbjct: 318 EGESEDIPILQTSLAYGVYMAVSSNLRYQILAGVVEQRILEPMLHNQKLLLSVMSFAIRTGNTFLGSLMWVDYARWVGVQR 398 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13368.2523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13368.2523.1 >prot_E-fasciculatus_F_contig13368.2523.1 ID=prot_E-fasciculatus_F_contig13368.2523.1|Name=mRNA_E-fasciculatus_F_contig13368.2523.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=186bp QKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLback to top mRNA from alignment at E-fasciculatus_F_contig13368:18..1170+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13368.2523.1 ID=mRNA_E-fasciculatus_F_contig13368.2523.1|Name=mRNA_E-fasciculatus_F_contig13368.2523.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1153bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13368:18..1170+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13368:18..1170+ >mRNA_E-fasciculatus_F_contig13368.2523.1 ID=mRNA_E-fasciculatus_F_contig13368.2523.1|Name=mRNA_E-fasciculatus_F_contig13368.2523.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1116bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13368:18..1170+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |