prot_E-fasciculatus_F_contig1332.2492.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1332.2492.1
Unique Nameprot_E-fasciculatus_F_contig1332.2492.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length504
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1332.2492.1 vs. uniprot
Match: D8LBD0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD0_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.720e-58
Identity = 245/422 (58.06%), Postives = 251/422 (59.48%), Query Frame = 0 
Query:   82 TPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNGXXXXXXXXXXXPPQVGGGGAPPQSPQFPPQQNQGFSTQQQLGGQQPSQANQQGFIRVAAPGPAGGPAGAPQFLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXPVQPQPGHQLMTAPGQYGGGAQYGAPPAAATSSTPKPQALGVSSSSSTPAPAAASPGAPRFDAYGRPIPQSQQQSPXXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXXQQQQHKXXXXXXXXXXXXXXXXXXXXXXXXXQQQQPPQXXAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGWQAVPDKSSGDTYYWNKSTGQTTWDFPTK 503
            TPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNG XXXXXXXXX PPQVGGGGAPPQSPQFP QQNQGFSTQQQ+GGQQPSQANQQGF+RVAAPGPAG            XXXXXXXXXXXXXXXXXXXXXXXXXXX  XXX    QPGHQLMTAPGQY GGAQYGA PAAATSSTPKPQ LGV+ +   PAP            +G                                                                                   Q PPQ X   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                           PPGWQAVPDKSSGDTYYWNK+TGQTTWDFPTK
Sbjct:   29 TPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNGPXXXXXXXXXAPPQVGGGGAPPQSPQFPTQQNQGFSTQQQVGGQQPSQANQQGFVRVAAPGPAGXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGHQLMTAPGQYTGGAQYGAQPAAATSSTPKPQVLGVTQA---PAP------------FG-----------------------------------------------------------------------------------QYPPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------PPGWQAVPDKSSGDTYYWNKATGQTTWDFPTK 307
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1332.2492.1 vs. uniprot
Match: A0A6H5KKE1_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE1_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 3.060e-57
Identity = 355/518 (68.53%), Postives = 358/518 (69.11%), Query Frame = 0 
Query:    1 GRSQGAPPTRPSGQQSRFGPPXXXXXXXXXXXXXXXXXQYQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXGFGATPPSTASRNGXXXXXXXXXXXPPQVGGGGAPPQSPQFPPQQNQGFSTQQQLGGQQPSQANQQGFIRVAAPGPAGGPAGAPQFLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXPVQPQPGHQLMTAPGQYGGGAQYGAPPAAATSSTPKPQALGVSSSSSTPAPAAASPGAPRFDAYGRPIPQSQQQSPXXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXXQQQQHKXXXXXXXXXXXXXXXXXXXXXXXXXQQQQPPQXXAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------PPGWQAVPDKSSGDTYYWNKSTGQTTWDFPTK 503
            GRSQGAPPTR SGQQSRFGP X     XXXXXXXXXXX    XXXXXXX                    XXXXXXXXXXXXT QADQFSNRPPSGFGAPPTHQXXXXXXXXXXXX                                    QSPQFP QQNQGFSTQQQ+GGQQPSQANQQGF+RVAAPGPAG            XXXXXXXXXXXXXXXXXXXXXXXXXXX  XXX    QPGHQLMTAPGQY GGAQYGA PAAATSSTPKPQ LGVSSS  TPAPAAAS GAP FDAYGRPIPQSQQQS XXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXX   Q     XXXXXXXX                QQ PQXX   XXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXX  T AP             XXXXXXXXXXXXXXXXXXX               PPGWQAVPDKSSGDTYYWNK+TGQTTWDFPTK
Sbjct:  421 GRSQGAPPTRSSGQQSRFGPXXTGPQQXXXXXXXXXXXXXX-XXXXXXXPMPPHGQPQDGGRPNTQMAPXXXXXXXXXXXXTSQADQFSNRPPSGFGAPPTHQXXXXXXXXXXXXXXXXXXXXXXX-------------------------QSPQFPTQQNQGFSTQQQIGGQQPSQANQQGFVRVAAPGPAGXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGHQLMTAPGQYAGGAQYGAQPAAATSSTPKPQVLGVSSS--TPAPAAASLGAPHFDAYGRPIPQSQQQSTXXXXXXXXXXXXXXXXXXXXXXXPQLDPXXXXXXXXXXXXXXQKPTQLXXXXXXXX----------------QQAPQXXQQQXXXXXXXXXXXXQQAATQXXXXXXXXXXXXXXXXXXXXXVTQAPATFAQYPPQSQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGWQAVPDKSSGDTYYWNKATGQTTWDFPTK 891
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1332.2492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBD0_ECTSI1.720e-5858.06WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KKE1_9PHAE3.060e-5768.53WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 470..503
e-value: 9.3E-8
score: 41.8
IPR001202WW domainPFAMPF00397WWcoord: 471..501
e-value: 1.3E-10
score: 41.2
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 475..501
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 469..503
score: 13.713
NoneNo IPR availableGENE3D2.20.70.10coord: 466..503
e-value: 3.0E-10
score: 41.7
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 463..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1332contigE-fasciculatus_F_contig1332:3..2108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1332.2492.1mRNA_E-fasciculatus_F_contig1332.2492.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1332 3..2108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1332.2492.1 ID=prot_E-fasciculatus_F_contig1332.2492.1|Name=mRNA_E-fasciculatus_F_contig1332.2492.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=504bp
GRSQGAPPTRPSGQQSRFGPPPTDPQQQQQQQQQQQQQQYQPQQASQQQR
PQMPPHGQPQDGGRQNTQMTPGQQQQQQGGRTPQADQFSNRPPSGFGAPP
THQPPTHQPPTHQPPGFGATPPSTASRNGPPSFGAPPTSAPPQVGGGGAP
PQSPQFPPQQNQGFSTQQQLGGQQPSQANQQGFIRVAAPGPAGGPAGAPQ
FLPPQQQQQQPPHFPPQQQPPQQQQQPSAAASAPQQPPVQPQPGHQLMTA
PGQYGGGAQYGAPPAAATSSTPKPQALGVSSSSSTPAPAAASPGAPRFDA
YGRPIPQSQQQSPQQQPPQQQPPQQPPLHQPPLHQPPQLDPYGRPIPQAQ
QQQQQQHKPPQLDMYGRPMPQQAQQQQQQQQPPQQQQPPQQQAASQQQQP
PQLDMYGRPLPQAQQQPAAQAPAPFGQYPPQSQAPTPAPAPTPAPAPTSA
PAPAPSPAPAPTPAAPATPALPPGWQAVPDKSSGDTYYWNKSTGQTTWDF
PTK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR001202WW_dom