prot_E-fasciculatus_F_contig13203.2416.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13203.2416.1
Unique Nameprot_E-fasciculatus_F_contig13203.2416.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length269
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13203.2416.1 vs. uniprot
Match: A0A6H5JZ55_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ55_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 3.080e-139
Identity = 217/260 (83.46%), Postives = 226/260 (86.92%), Query Frame = 0 
Query:    1 GALAVGAVAASVVSPYSSYDGGGNGMVVWREGQQEMSAKVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAIVLDVVNDNLVTDSIIGTTGSIGLKTAATGESKWWNVSRGGTIQAIIELVTPDSAGGGSTGTHPNAAYSRSXXXXXXXXXXXXXXXXXXXXXXYGGGRVATINPSPHVAVAHATPVAAAGAPGNAYGGATPVAAAMSDPPPSYE 260
            GALAVGAVAASVVSPY+SYDGG NGMVVWREGQQEMSA VNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLA+VLDVVNDNLV DSIIGTTGSIGL+TAATGESKWWN+S GGTIQAIIEL+TP+S GGG TGTHPN AYSR+                      YGGGRVAT+NP PHVAVAHATPVAA GAPGNAYGGA P A AMS+PPPSYE
Sbjct:  146 GALAVGAVAASVVSPYTSYDGGRNGMVVWREGQQEMSAPVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAVVLDVVNDNLVADSIIGTTGSIGLQTAATGESKWWNISSGGTIQAIIELITPESGGGGGTGTHPNTAYSRNSAAAADPAVASSRPSGGS----YGGGRVATVNPPPHVAVAHATPVAA-GAPGNAYGGAAPGAMAMSNPPPSYE 400
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BLAST of mRNA_E-fasciculatus_F_contig13203.2416.1 vs. uniprot
Match: D8LMN7_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN7_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.680e-138
Identity = 223/262 (85.11%), Postives = 231/262 (88.17%), Query Frame = 0 
Query:    1 GALAVGAVAASVVSPYSSYDGGGNGMVVWREGQQEMSAKVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAIVLDVVNDNLVTDSIIGTTGSIGLKTAATGESKWWNVSRGGTIQAIIELVTPDSAGGGSTGTHPNAAYSRSXXXXXXXXXXXXXXXXXXXXXXYGGGRVATINPSPHVAVAHATPVAAAGAPGNAYGGATPVAAAMSDPPPSYEVS 262
            GALAVGAVAASVVSPY+SYDGG NGMVVWREGQQEMSA VNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMA+SVFTFYVPATVTL+TLA+VLDVVNDNLV DSIIGTTGSIGLKTAATGESKWWNVS GGT+QAIIEL+TP+S G     THPN AYSRSXXXXXX                Y GGRVAT+NPSPHVAVAHATPVAA GAPGNAYGGATPVA AMSDPPPSYE S
Sbjct:  128 GALAVGAVAASVVSPYTSYDGGRNGMVVWREGQQEMSAPVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMARSVFTFYVPATVTLETLAVVLDVVNDNLVADSIIGTTGSIGLKTAATGESKWWNVSSGGTLQAIIELITPESGGXXXXXTHPNIAYSRSXXXXXXPAVASSRPSGGS----YNGGRVATVNPSPHVAVAHATPVAA-GAPGNAYGGATPVATAMSDPPPSYEQS 384
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13203.2416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZ55_9PHAE3.080e-13983.46C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LMN7_ECTSI1.680e-13885.11C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 42..152
e-value: 0.0054
score: 25.9
IPR000008C2 domainPFAMPF00168C2coord: 43..142
e-value: 3.4E-8
score: 33.7
IPR000008C2 domainPROSITEPS50004C2coord: 41..136
score: 10.368
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 33..166
e-value: 1.2E-13
score: 53.1
NoneNo IPR availablePANTHERPTHR47052FAMILY NOT NAMEDcoord: 36..259
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 37..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13203contigE-fasciculatus_F_contig13203:393..3718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13203.2416.1mRNA_E-fasciculatus_F_contig13203.2416.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13203 393..3718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13203.2416.1 ID=prot_E-fasciculatus_F_contig13203.2416.1|Name=mRNA_E-fasciculatus_F_contig13203.2416.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=269bp
GALAVGAVAASVVSPYSSYDGGGNGMVVWREGQQEMSAKVNMVTVRVCQA
QNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKS
VFTFYVPATVTLDTLAIVLDVVNDNLVTDSIIGTTGSIGLKTAATGESKW
WNVSRGGTIQAIIELVTPDSAGGGSTGTHPNAAYSRSSAAAAAAAPAAAS
SRPSGGGGSYGGGRVATINPSPHVAVAHATPVAAAGAPGNAYGGATPVAA
AMSDPPPSYEVSARACALS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom