mRNA_E-fasciculatus_F_contig13183.2402.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13183.2402.1
Unique NamemRNA_E-fasciculatus_F_contig13183.2402.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 2.580e-213
Identity = 340/367 (92.64%), Postives = 345/367 (94.01%), Query Frame = 1
Query:    1 MRRALHATRSSLPSRPRHHHPSRKRALHVYTHGEGFLGALGHGDFSAREEALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKADGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVTTPVEV 1101
            MRRAL ATRSSLPSRPRHHH SRKRALHVYTHGEGFLGALGHGDFSARE+ALPV ALASRDLRC SAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALAS REVLPSPVSVPL+A+PA AST+STV+AA HD RP       PPTP SSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRV GGRA E E VVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVK DGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTV TPVEV
Sbjct:    1 MRRALQATRSSLPSRPRHHHQSRKRALHVYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPLMAEPAAASTASTVTAALHDARPSLHF---PPTP-SSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRV-GGRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVPTPVEV 362          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A6H5JG88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG88_9PHAE)

HSP 1 Score: 582 bits (1499), Expect = 5.000e-206
Identity = 323/367 (88.01%), Postives = 332/367 (90.46%), Query Frame = 1
Query:    1 MRRALHATRSSLPSRPRHHHPSRKRALHVYTHGEGFLGALGHGDFSAREEALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKADGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVTTPVEV 1101
            MRRAL ATRSSLPSRPRHHH SRKRALHVYTHGEGFLGALGHGDFSAREE LPV ALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALAS REVLPSPV VPL+AKP+ AST+ST++AAFHD RP S   P P    SSLRA SVACSAALTVVLGEDGKVYCMGYNRWGQCGQGP+N FTVFEPLRV GGRA E E+VVKLAVG QQVLVLCESGRVFGWGKGLRGQLGVG E MELPEEVELPGKVVD    XXXXXXXXXXXXXXXXX MQGTEVK DGRVPVYHDQL+PRKVDVGGGRAVEAFCSS NT+LRMEDGRVLM G EADTRRTV TPVEV
Sbjct:   17 MRRALQATRSSLPSRPRHHHQSRKRALHVYTHGEGFLGALGHGDFSAREETLPVAALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVPVPLIAKPSAASTASTITAAFHDARPSSYSLPAP----SSLRANSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENEFTVFEPLRV-GGRALEREQVVKLAVGLQQVLVLCESGRVFGWGKGLRGQLGVGDETMELPEEVELPGKVVDLRSGXXXXXXXXXXXXXXXXXKMQGTEVKTDGRVPVYHDQLHPRKVDVGGGRAVEAFCSSSNTMLRMEDGRVLMWGFEADTRRTVPTPVEV 378          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A8K1FR76_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR76_PYTOL)

HSP 1 Score: 131 bits (329), Expect = 8.880e-30
Identity = 105/342 (30.70%), Postives = 149/342 (43.57%), Query Frame = 1
Query:   85 VYTHGEGFLGALGHGDFSAREEALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREV---LPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEV-ELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKADGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVTTPVE 1098
            +Y++GEGFLGALG G+++  E   P+       +R  SAGW H+  V  D G+  V+GR    +  +R   + RL P+++  INA     E+   LP+ V +P                                      + K + CS ALT  L E GK++ MG N +GQCG G + V +V  P  V   R  E+E V  +A GFQ  LV+  SG VF WGKG RGQLG G   ++ P+EV  L  + V                       + G  +   G+     DQ+ PR +       ++  CS F+T    ED R  + G     R+     VE
Sbjct:   29 IYSYGEGFLGALGTGNYANVELPTPLPTTTDLTIRELSAGWAHAGFVTED-GDAYVYGRTHSFRDVIRATNMNRLTPWLLRWINAFTMRTEIDTLLPAKVQLP-----------------------------------EGEKVKKMVCSTALTFFLTESGKLFTMGANFYGQCGTGEEGV-SVLTPTHV---RIGEDEPVADIAAGFQHGLVVTTSGNVFSWGKGERGQLGFGTANVKTPQEVIALKNRNV---VSVSAGFNHSSALTKDGELFLWGKLLNPKGKDESNGDQVTPRLIKTRDAVRLQE-CSHFHTTFITEDHRAWVVGRTPSARKETDEYVE 326          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.410e-28
Identity = 98/328 (29.88%), Postives = 146/328 (44.51%), Query Frame = 1
Query:   85 VYTHGEGFLGALGHGDFSAREEALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREV---LPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEE-VELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKADGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSG 1056
            VY++GEG+LGALG G ++   +   +E  A+      SAGW H   V    G+  V+GR    +  +R   IQR+ P+++   N     R V   LP+ V++P                                      RA+ + CSAALT+VL E G+++  G N +GQCG   + V    EP+RV    A + ++VV +A G+Q  L +  SG VF WGKG RGQLG G   ++ P+E + L GK V                       + G  +  +G+     DQ+ PR V       +   CS F+T     D ++ + G
Sbjct:   29 VYSYGEGYLGALGTGAYAGVAQPTALEEPAALGATQLSAGWAHGGFVS-SAGDTFVFGRALSFRDVIRSTNIQRVAPWLLAWTNEFTRRRGVDTLLPARVALP-----------------------------------EGERARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREGVSEP-EPVRV----ALDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAPQELIALKGKAV---AAVSAGFNHSSALTRDGELFVWGKLLNLEGKDENGGDQVVPRLVRTSDAVTLLQ-CSHFHTAFLTADDKIWVVG 311          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A484E934_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E934_BRELC)

HSP 1 Score: 112 bits (280), Expect = 4.200e-24
Identity = 96/332 (28.92%), Postives = 143/332 (43.07%), Query Frame = 1
Query:   85 VYTHGEGFLGALGHGDFSAREEALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEE-VELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKADGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRR 1077
            + ++G+GFLGALG G +       P+    +  ++  S GW H+  V  D G+  ++GR    +  +R   +QR+ P +V  +N+    R V                           DT  L P     P      R K + CSAALT +L E GK++ +G N +GQCG G + V +V  P  V     F+ ++VV +A G+Q  L + E+G VF WGKG RGQLG G    + P+E + L GK +                       + G  +   G      DQ+ PR V       +   CS F+T     D ++ + G     RR
Sbjct:   34 LLSYGDGFLGALGTGGYDDVVAPTPLATTTALSVKEISVGWAHAGFVT-DQGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTRSRGV---------------------------DT--LEPALLEMP---DRERVKKIVCSAALTFILTECGKLFTLGANGYGQCGIGEEGV-SVQLPTHV----RFDGDKVVDIASGYQHGLAVTENGTVFCWGKGERGQLGFGSGNTDAPQELIALKGKRI---VKVDAGFNYSCAITEDGELYVWGKLLNPKGMSEANGDQITPRLVQTSDAVKLSK-CSHFHTSFITADNKIWLLGRTPSGRR 323          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A196SGG2_BLAHN (Ankyrin repeat-containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGG2_BLAHN)

HSP 1 Score: 107 bits (268), Expect = 2.040e-22
Identity = 74/234 (31.62%), Postives = 112/234 (47.86%), Query Frame = 1
Query:   76 ALHVYTHGEGFLGALGHGDFSAREEALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEV-VKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVG 774
            +L VYT+G+G +GALGH D++ RE    V++L  R +   + GW H+  V  D GE++++GR  D++  +    +    P V+ + N                          ++ +   F    P+              +   VA S AL+  L +   +Y  GYNR+GQCG    +V  ++ P +V      +E+E+ VKLA GFQ    LCESGRV+ WGK   GQLG G
Sbjct:   32 SLSVYTYGKGAIGALGHNDYNDREYPCRVDSLEGRGIHKIACGWAHNCLVDGD-GEMVIFGRTQDVRNIIGAGNMISYLPKVIRSFNNFFK----------------------NTVIETRFPSVLPI-----------EDGKCVDVAASMALSFCLTDTHHIYAYGYNRYGQCGVDMKDV-NLYAPKQV----MLDEDEIPVKLACGFQHACCLCESGRVYAWGKANHGQLGRG 226          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A418ALH5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ALH5_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.980e-20
Identity = 75/235 (31.91%), Postives = 103/235 (43.83%), Query Frame = 1
Query:   85 VYTHGEGFLGALGHGDFSAREEALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREVLP-SPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEVVKL------AVGFQQVLVLCESGRVFGWGKGLRGQLG 768
            +Y++GEG+LG LGHG++S+ E    ++A    DL  AS GW+H+  V    G+  V+GR    K  +R   + R  P+ +   N +   R V   +PV V L  K                                      VAC   L++   E G +Y  G N +GQCG G +N              +  E EVVKL      A G+Q VL L   G+V+ WGKG RGQLG
Sbjct:   16 LYSYGEGYLGTLGHGNYSSVEAPKALDAFDGLDLVQASTGWSHTGVVDAH-GKAYVFGRTHHFKNVIRAINMHRFAPWFLDFANKVGGHRSVEAFTPVEVTLPEK-----------------------------------VVEVACGTTLSLFRTESGSLYANGGNYYGQCGVGHENA-------------SVWEAEVVKLPPVQQVAAGYQHVLALTTEGQVYSWGKGERGQLG 201          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A7S1CCH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCH6_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.610e-19
Identity = 73/239 (30.54%), Postives = 110/239 (46.03%), Query Frame = 1
Query:   67 RKRALHVYTHGEGFLGALGHGDFSAREEALPVEALAS--RDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSA-ALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVG 774
            R++ +  ++ G+G+LGALGHG+     +   +  LA    D+    AGW HSAA   D G  ++WGRP+D KQ LR + I    P++  A+  ++  R VL S +   +                                 A     + VAC A ALTV +   G+V+ +G N  GQCG G  +    F+   V    + +   +V    GF   L L   G+++ WG+G RGQLG+G
Sbjct:   43 RRQRVGAFSFGKGYLGALGHGNLGDAPDVTLIRELAEVGADVTSVGAGWGHSAATTSD-GAAVIWGRPYDFKQTLRTHHIHDFAPWLARALGRISG-RVVLLSTLPTRIDG-------------------------------ADEEHFERVACGAGALTVGVTRSGRVFSVGVNFHGQCGTGATSACE-FDWAPVA---SLDGAGIVDARCGFAHTLALAADGQLYAWGRGHRGQLGLG 244          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A7S2XT67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XT67_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.410e-15
Identity = 87/269 (32.34%), Postives = 128/269 (47.58%), Query Frame = 1
Query:   70 KRALHVYTHGEGFLGALGHGDFS--AREEALPVEALASRDLR------------CASAGWTHSAAVCRDTG----EVLVWGRPFDLKQPLRINRIQRLF--PFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPR--SPPPPTPASSLRAKSVACSAA--LTVVLGEDGKVYCMGYNRWGQCG-QGPDNVFTVFEPLRVGGGRAF---------EEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVG 774
            +R + VY  G+G+ GALG  DF    R      EA +  +++             A+AGW HSA + +D      +++V GRP D +  LR+ RI      P +  + +    P    P+     + A         T+S   + TR + P   + P P     + + SV  SA+  LT V+G  GK+Y MG N  GQCG +  +NV+T   P+ VG   AF         +E  +V +A+G Q  L + E G +F WGKG RGQLG+G
Sbjct:   51 RRGMAVYVSGDGWTGALGSPDFVDFTRPAENSEEAFSLTEVKQYADQTPFSGVIAAAAGWGHSALIIQDPSTKEKKLMVCGRPQDFQNLLRLRRIPPFIRSPLMKRSFDQFYEPDRDQPTMFDQLIDAMIG--DKHPTISTDRNLTRTVFPHFVTVPLPDDDEPIESSSVVLSASVGLTAVVGASGKLYTMGINSRGQCGVEFSNNVWTP-TPV-VGLSTAFPSEGRPKLQQESNIVSVALGLQHGLAIDEQGSLFSWGKGHRGQLGLG 315          
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Match: A0A7S3H2C8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2C8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.730e-14
Identity = 101/375 (26.93%), Postives = 142/375 (37.87%), Query Frame = 1
Query:   85 VYTHGEGFLGALGHG-DFSAREEALPVEALASRD-----LRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTRPLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQ--GPDNVFTVFE-PLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLG-VGGEMMELPE------------------------EVE-LPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKADGRVPVYHDQLYPRKVDVGGGRAVEAFCSS-FNTLLRMEDGRVLMSGLEADTRRTVTTPVEV 1101
            V T G G LGALG   D     +   +++    D     +R  SAGW H+A V  ++G++ ++GRP+D +Q +RI++I R F  ++  + A                       STS      F   R LS   P P           ++CSA LT  L E G+VY  G NRWGQCG    P N   + +  + +             +  G Q  L + + G ++ WGK   GQLG +     E+P                         EVE L  K V                             K  G+  V  DQL PRK+++ G R V    SS F  ++   DG V   G     R     P+ V
Sbjct:   44 VMTQGRGVLGALGQSTDIKDSAKYRELKSFKFSDGTNLSVRSVSAGWGHTATVS-ESGKLYIFGRPYDFRQLMRIDKIYR-FSSIIARLFA----------------------GSTS-----IF---RKLSGYYPTPIPVEHEEPITDLSCSAGLTAFLTESGEVYAFGLNRWGQCGSMIAPPNAPELKDYTMHLMDATKVNIPPCQGIDTGLQHCLAVTKEGEIYSWGKASNGQLGNLNMAKKEIPPYALPDLVKLEPFKAYKGKSFANGAEVEPLKAKQVSAGFAHSAALTTEGDVYIWGKGMSLDMNEKLTGQAIVNEDQLLPRKLELPGDRKVVQIASSNFQLVMLATDGSVWALGRGEKDRNANVNPLRV 386          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13183.2402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL82_ECTSI2.580e-21392.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG88_9PHAE5.000e-20688.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1FR76_PYTOL8.880e-3030.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XTS7_9STRA1.410e-2829.88Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A484E934_BRELC4.200e-2428.92Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A196SGG2_BLAHN2.040e-2231.62Ankyrin repeat-containing protein n=1 Tax=Blastocy... [more]
A0A418ALH5_9STRA2.980e-2031.91Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S1CCH6_9STRA3.610e-1930.54Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2XT67_9STRA1.410e-1532.34Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S3H2C8_9STRA1.730e-1426.93Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13183contigE-fasciculatus_F_contig13183:234..2346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score605.5
Seed ortholog evalue1.6e-170
Seed eggNOG ortholog2880.D8LL82
KEGG koko:K19607
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-24_002600.1
Exons2
Model size1101
Cds size1101
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927821.59277-CDS-E-fasciculatus_F_contig13183:233..5321622927821.59277-CDS-E-fasciculatus_F_contig13183:233..532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13183 234..532 -
1695995709.227855-CDS-E-fasciculatus_F_contig13183:233..5321695995709.227855-CDS-E-fasciculatus_F_contig13183:233..532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13183 234..532 -
1622927821.607884-CDS-E-fasciculatus_F_contig13183:1544..23461622927821.607884-CDS-E-fasciculatus_F_contig13183:1544..2346Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13183 1545..2346 -
1695995709.2385478-CDS-E-fasciculatus_F_contig13183:1544..23461695995709.2385478-CDS-E-fasciculatus_F_contig13183:1544..2346Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13183 1545..2346 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13183.2402.1prot_E-fasciculatus_F_contig13183.2402.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13183 234..2346 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13183.2402.1

>prot_E-fasciculatus_F_contig13183.2402.1 ID=prot_E-fasciculatus_F_contig13183.2402.1|Name=mRNA_E-fasciculatus_F_contig13183.2402.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=367bp
MRRALHATRSSLPSRPRHHHPSRKRALHVYTHGEGFLGALGHGDFSAREE
ALPVEALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRI
QRLFPFVVTAINALASPREVLPSPVSVPLVAKPAPASTSSTVSAAFHDTR
PLSPRSPPPPTPASSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQ
GPDNVFTVFEPLRVGGGRAFEEEEVVKLAVGFQQVLVLCESGRVFGWGKG
LRGQLGVGGEMMELPEEVELPGKVVDLRSGFSHAVAVLENGDVYTWGKMQ
GTEVKADGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLM
SGLEADTRRTVTTPVEV
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mRNA from alignment at E-fasciculatus_F_contig13183:234..2346-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13183.2402.1 ID=mRNA_E-fasciculatus_F_contig13183.2402.1|Name=mRNA_E-fasciculatus_F_contig13183.2402.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2113bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13183:234..2346- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGTCGTGCCCTCCACGCCACACGTTCCTCACTCCCTTCCCGACCACG ACATCACCACCCATCTCGCAAGCGAGCCCTGCATGTCTACACCCACGGAG AGGGCTTCCTCGGCGCGCTGGGCCATGGCGACTTCTCCGCGCGAGAAGAG GCGCTCCCCGTCGAGGCCCTCGCGTCCAGAGATCTGCGCTGCGCTAGCGC GGGCTGGACGCACTCCGCCGCCGTCTGCAGAGACACCGGGGAGGTGCTGG TGTGGGGCCGGCCGTTCGACCTGAAGCAGCCCCTGCGGATCAACCGCATC CAGCGCCTGTTCCCGTTCGTGGTCACCGCGATCAACGCCCTCGCGAGCCC GAGAGAGGTCCTCCCGAGCCCGGTTTCCGTCCCGCTGGTCGCCAAGCCTG CCCCCGCTTCGACGTCCTCCACGGTCTCCGCGGCCTTCCACGACACCCGC CCGTTGTCGCCGCGCTCTCCGCCGCCGCCGACCCCTGCTTCCTCCCTCAG GGCGAAGAGCGTCGCGTGCTCGGCCGCCCTTACCGTGGTCCTCGGCGAGG ACGGCAAGGTCTACTGCATGGGGTACAACCGGTGGGGCCAGTGCGGGCAG GGGCCCGACAACGTCTTCACCGTGTTCGAGCCGCTTCGAGTAGGCGGCGG CCGCGCGTTCGAGGAGGAGGAGGTGGTCAAGCTGGCCGTTGGCTTCCAGC AGGTGCTGGTGCTCTGCGAGAGCGGCAGGGTGTTCGGCTGGGGGAAAGGG CTGAGGGGGCAGCTGGGTGTCGGCGGCGAGATGATGGAGCTCCCTGAGGA AGGTGGGTGGTTGTCCCGAGCGGTGGAGGGTGGTATGTTGTTGTTCTACC TTGCATGCGGTGTGTTTGGGTTGAGCGCGCCGTACTCTGCGATGCACGGA AGCATTCCGCCGTCGGTGTAGTGTGTACGTGCATAGGCTCCACGTGAAAG GCTCACACAAACAGTAATCGGCACCGAGACGAACTTGTAACAATCTTACG CCCCGAGACGGATCCGGCGCCAGCGCTTGCACCCACCTATTTCCTTCTCC TTCGCTGCTCCCAAACGCACTCGACGTAACACTCCTGTACTGCTGTAGTT CCTTGTATACCAGGCTTGTACTAGCCGTACGTGTTCGCAAGCATTTCCTT TTGCACTGCTGTCGACCTACCGGGCGAAAATATCGCTAGCCAGCTGTAGA CAGCCACCACTCATACCGCACCAGCCAGTGCAGTTTGGTATGCATCGATA GTGTTGATGAAAAATGCTGCAGAAATCGCTCACCCCTCTAGGTACAGCAG TCCACCGCGAGAACAGTCAATGACGTGGGATCCTCCTGAATGCTTTGGCA TCTTTGTCGGGCAGTCTCCGGCCCGCCACACCCTCTCATTATCAACATGC CCTTTCCGCGCACGCTAGGCCATGAGTCTGCGCAATGGCGAGCGGCCGAG TCCACACAACAGCAACCTTTCGAAACATACTGCTGTCCAAACGGCAAAAA CCTGTCAGCAACCACAGCTTGTTGCGCCCTACCGGCGCTGTTGATGTTCC AACCCGTTCCAACCCGCACGTTCCTATATCCCGCGCATGCCTGCAGTGTA TGACACGAAAGAATGATGACACCCAGACTACAGCAGTACACCTCAAAAGT TGTAGTCACATGTCGGGGTTGCCCGTTGGTGCTCATCTAAGACACGTGTG TCTCTTTCGAGATCACTCATACAGTTGTTGTCGTTCCAAGATTGCTTCCT CTCTCTTTTGCCAGGAAGAAAAACTGACGCTGACTCCGCCCTCCCCCCGT GCCCCCCCCCACAGTCGAACTCCCCGGGAAGGTGGTGGACCTCCGCAGCG GCTTCAGCCACGCCGTCGCCGTCCTCGAGAACGGGGATGTCTACACCTGG GGGAAGATGCAGGGCACGGAGGTGAAGGCGGACGGCAGGGTCCCCGTGTA TCACGACCAGCTCTACCCCCGCAAGGTGGACGTCGGAGGAGGGCGGGCCG TGGAGGCCTTCTGCTCGTCGTTCAACACCCTGCTGAGGATGGAGGACGGC AGGGTGCTCATGTCGGGCCTCGAGGCCGACACTCGGAGAACGGTTACGAC GCCGGTTGAGGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13183:234..2346-

>mRNA_E-fasciculatus_F_contig13183.2402.1 ID=mRNA_E-fasciculatus_F_contig13183.2402.1|Name=mRNA_E-fasciculatus_F_contig13183.2402.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2202bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13183:234..2346- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGTCGTGCCCTCCACGCCACACGTTCCTCACTCCCTTCCCGACCACG
ACATCACCACCCATCTCGCAAGCGAGCCCTGCATGTCTACACCCACGGAG
AGGGCTTCCTCGGCGCGCTGGGCCATGGCGACTTCTCCGCGCGAGAAGAG
GCGCTCCCCGTCGAGGCCCTCGCGTCCAGAGATCTGCGCTGCGCTAGCGC
GGGCTGGACGCACTCCGCCGCCGTCTGCAGAGACACCGGGGAGGTGCTGG
TGTGGGGCCGGCCGTTCGACCTGAAGCAGCCCCTGCGGATCAACCGCATC
CAGCGCCTGTTCCCGTTCGTGGTCACCGCGATCAACGCCCTCGCGAGCCC
GAGAGAGGTCCTCCCGAGCCCGGTTTCCGTCCCGCTGGTCGCCAAGCCTG
CCCCCGCTTCGACGTCCTCCACGGTCTCCGCGGCCTTCCACGACACCCGC
CCGTTGTCGCCGCGCTCTCCGCCGCCGCCGACCCCTGCTTCCTCCCTCAG
GGCGAAGAGCGTCGCGTGCTCGGCCGCCCTTACCGTGGTCCTCGGCGAGG
ACGGCAAGGTCTACTGCATGGGGTACAACCGGTGGGGCCAGTGCGGGCAG
GGGCCCGACAACGTCTTCACCGTGTTCGAGCCGCTTCGAGTAGGCGGCGG
CCGCGCGTTCGAGGAGGAGGAGGTGGTCAAGCTGGCCGTTGGCTTCCAGC
AGGTGCTGGTGCTCTGCGAGAGCGGCAGGGTGTTCGGCTGGGGGAAAGGG
CTGAGGGGGCAGCTGGGTGTCGGCGGCGAGATGATGGAGCTCCCTGAGGA
AGATGCGTCGTGCCCTCCACGCCACACGTTCCTCACTCCCTTCCCGACCA
CGACATCACCACCCATCTCGCAAGCGAGCCCTGCATGTCTACACCCACGG
AGAGGGCTTCCTCGGCGCGCTGGGCCATGGCGACTTCTCCGCGCGAGAAG
AGGCGCTCCCCGTCGAGGCCCTCGCGTCCAGAGATCTGCGCTGCGCTAGC
GCGGGCTGGACGCACTCCGCCGCCGTCTGCAGAGACACCGGGGAGGTGCT
GGTGTGGGGCCGGCCGTTCGACCTGAAGCAGCCCCTGCGGATCAACCGCA
TCCAGCGCCTGTTCCCGTTCGTGGTCACCGCGATCAACGCCCTCGCGAGC
CCGAGAGAGGTCCTCCCGAGCCCGGTTTCCGTCCCGCTGGTCGCCAAGCC
TGCCCCCGCTTCGACGTCCTCCACGGTCTCCGCGGCCTTCCACGACACCC
GCCCGTTGTCGCCGCGCTCTCCGCCGCCGCCGACCCCTGCTTCCTCCCTC
AGGGCGAAGAGCGTCGCGTGCTCGGCCGCCCTTACCGTGGTCCTCGGCGA
GGACGGCAAGGTCTACTGCATGGGGTACAACCGGTGGGGCCAGTGCGGGC
AGGGGCCCGACAACGTCTTCACCGTGTTCGAGCCGCTTCGAGTAGGCGGC
GGCCGCGCGTTCGAGGAGGAGGAGGTGGTCAAGCTGGCCGTTGGCTTCCA
GCAGGTGCTGGTGCTCTGCGAGAGCGGCAGGGTGTTCGGCTGGGGGAAAG
GGCTGAGGGGGCAGCTGGGTGTCGGCGGCGAGATGATGGAGCTCCCTGAG
GAAGTCGAACTCCCCGGGAAGGTGGTGGACCTCCGCAGCGGCTTCAGCCA
CGCCGTCGCCGTCCTCGAGAACGGGGATGTCTACACCTGGGGGAAGATGC
AGGGCACGGAGGTGAAGGCGGACGGCAGGGTCCCCGTGTATCACGACCAG
CTCTACCCCCGCAAGGTGGACGTCGGAGGAGGGCGGGCCGTGGAGGCCTT
CTGCTCGTCGTTCAACACCCTGCTGAGGATGGAGGACGGCAGGGTGCTCA
TGTCGGGCCTCGAGGCCGACACTCGGAGAACGGTTACGACGCCGGTTGAG
GTGTCGAACTCCCCGGGAAGGTGGTGGACCTCCGCAGCGGCTTCAGCCAC
GCCGTCGCCGTCCTCGAGAACGGGGATGTCTACACCTGGGGGAAGATGCA
GGGCACGGAGGTGAAGGCGGACGGCAGGGTCCCCGTGTATCACGACCAGC
TCTACCCCCGCAAGGTGGACGTCGGAGGAGGGCGGGCCGTGGAGGCCTTC
TGCTCGTCGTTCAACACCCTGCTGAGGATGGAGGACGGCAGGGTGCTCAT
GTCGGGCCTCGAGGCCGACACTCGGAGAACGGTTACGACGCCGGTTGAGG
TG
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