mRNA_E-fasciculatus_F_contig13125.2369.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13125.2369.1
Unique NamemRNA_E-fasciculatus_F_contig13125.2369.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A8H7UVI0_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UVI0_9FUNG)

HSP 1 Score: 84.7 bits (208), Expect = 1.060e-15
Identity = 49/184 (26.63%), Postives = 90/184 (48.91%), Query Frame = 1
Query:   10 FSPWHPDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            ++   P+++ QLP +L + FPA++  R  + K I   +   +   VG +     + E H++H   +E +Y     ++R+     F  +       P +F  ++D   Y G  P    + ++  A+ E  +    +   L+DG+I  GD S K  K + ++ D  VF G+YT+ NE+ ++V QVL
Sbjct:  205 YNAHDPEIIEQLPLELQVEFPAVLSHRGGISKVIADLLRPCIQNSVGPERFQKILRELHVLHHDRIELQYLLSEYKKRNGISQYFATSP------PERFSSFNDQKKYAGFVPTGTYIRTLYTAIIEVLQPKMDKHMMLLDGKIFKGDHSFKFPKHMAKIEDTSVFTGLYTMTNEYEEIVHQVL 382          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A8H7UST7_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UST7_9FUNG)

HSP 1 Score: 81.3 bits (199), Expect = 1.630e-14
Identity = 47/187 (25.13%), Postives = 90/187 (48.13%), Query Frame = 1
Query:    4 YKFSPWHPDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARR-RDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            + F  +   ++RQLP  +    PA++  RS   K+++  +        G   +   +  NH   F  ++ +YY  +  +  +Q     L     T    P+F  ++D  GY+G  P    ++ V  ++ +    + ++ + L+DG +L GD S KI K + +++    F  +YT+LNE+ ++ LQVL
Sbjct:  243 HTFMGYASSIIRQLPPRVQADLPALLTHRSGFSKQLVRLLRTQFQNAAGSHRMHQILRTNHTEKFDSIQFQYYDALKDKLNEQNMAKKLVGNVSTATTYPEFSTFNDRNGYNGYVPSANYISYVYCSIIDELRPYMNQHTSLLDGIVLKGDHSFKIIKHMAKINGVSTFSCLYTLLNEYEEIRLQVL 429          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A8H4F4X9_MUCCL (Uncharacterized protein (Fragment) n=1 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A8H4F4X9_MUCCL)

HSP 1 Score: 76.6 bits (187), Expect = 4.210e-13
Identity = 50/184 (27.17%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   10 FSPWHPDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            +  + P ++ QLP++L M FPAI+  +  V K +   +   +   +G +     + E H++   ELE +Y         +K+G     E    R    +  ++D   Y G  PG     ++  A+ +  +    + + L+DG++L  D S K  K I ++ DA VF  ++TV NE+ ++V QVL
Sbjct:  158 WQSYDPVIMHQLPQELQMEFPAILTRKGGVSKTVANLLRPCMQNSMGPQRFQKLLRELHVLRHDELELQYLLSQL---GKKEGLL---EKYPFR---PYSSFEDSNQYAGYVPGAIYFRTLYTAIIDELKPKMEKHAMLLDGKVLKCDHSFKFPKHIAKIEDAGVFTALFTVTNEYEEIVHQVL 332          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A168MI40_MUCCL (3'-5' exonuclease domain-containing protein n=1 Tax=Mucor lusitanicus CBS 277.49 TaxID=747725 RepID=A0A168MI40_MUCCL)

HSP 1 Score: 76.6 bits (187), Expect = 6.630e-13
Identity = 50/184 (27.17%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   10 FSPWHPDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            +  + P ++ QLP++L M FPAI+  +  V K +   +   +   +G +     + E H++   ELE +Y         +K+G     E    R    +  ++D   Y G  PG     ++  A+ +  +    + + L+DG++L  D S K  K I ++ DA VF  ++TV NE+ ++V QVL
Sbjct:  123 WQSYDPVIMHQLPQELQMEFPAILTRKGGVSKTVANLLRPCMQNSMGPQRFQKLLRELHVLRHDELELQYLLSQL---GKKEGLL---EKYPFR---PYSSFEDSNQYAGYVPGAIYFRTLYTAIIDELKPKMEKHAMLLDGKVLKCDHSFKFPKHIAKIEDAGVFTALFTVTNEYEEIVHQVL 297          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A8H7RP11_9FUNG (3'-5' exonuclease domain-containing protein n=2 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RP11_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 6.690e-13
Identity = 49/178 (27.53%), Postives = 83/178 (46.63%), Query Frame = 1
Query:   31 VLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNP-PQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            +L+QLP  L + FPAI+  R A+   +I  +   +  G+G+    + + E H      L  +Y      R++ +Q  F    N   +N   +F  +DD  GY G  P       V  A+ +    +  ++   V G IL GD + K  K I ++ +   F  +YT+ NE+ ++ LQ+L
Sbjct:  251 ILKQLPDQLSIEFPAILTHRCAISNNLIDILRPCIQHGMGIANFHEMLQELHTKRHTILHMKYTLAHLYRKETQQTLFESWNNNNNKNKYHEFSTFDDAQGYGGYIPSVTYFRLVYTAILDVLRPFMDKQMTAVGGEILKGDHTFKFIKKIAKMGNQPTFGALYTICNEYEEIRLQLL 428          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A168PC96_MUCCL (3'-5' exonuclease domain-containing protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A168PC96_MUCCL)

HSP 1 Score: 75.1 bits (183), Expect = 2.160e-12
Identity = 49/184 (26.63%), Postives = 88/184 (47.83%), Query Frame = 1
Query:   10 FSPWHPDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            +  + P ++ QLP++L M FPAI+  +  V K +   +   +   +G +     + E H++   ELE +Y         +K+G     E    R    +  ++D   Y G  PG     ++  A+ +  +    + + L+DG++L  D S K  K I ++ DA VF  ++TV NE+ ++V Q L
Sbjct:  277 WQSYDPVIMHQLPQELQMEFPAILTRKGGVSKTVANLLRPCMQNSMGPQRFQKLLRELHVLRHDELELQYLLSQL---GKKEGLL---EKYPFR---PYSSFEDSNQYAGYVPGAIYFRTLYTAIIDELKPKMEKHAMLLDGKVLKCDHSFKFPKHIAKIEDAGVFTALFTVTNEYEEIVHQAL 451          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A0B7N4P0_9FUNG (4a-hydroxytetrahydrobiopterin dehydratase n=4 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N4P0_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 2.360e-12
Identity = 48/177 (27.12%), Postives = 85/177 (48.02%), Query Frame = 1
Query:   31 VLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            +++QLP +L M FPA++  +  V K +   +   +   +G +     + E H++    LE +Y         +K G       E       +  +DDP  Y G  P  A   ++  A+ +  +    ++  L+DG++L GD S K  K + ++ +A VF  +YTV NE+ ++V QVL
Sbjct:  965 IIQQLPLELQMEFPAVLSSKGGVSKVVADLLRPCMQNSMGPQRFQKVLREMHVLRHDRLELQYLLSAF---SKKSGVLHFQAFEP------YSTFDDPTKYAGYVPTAAYFRTLYTAIIQQLQPKMDKQIMLLDGKVLKGDHSFKFPKHMAKIEEAGVFTALYTVTNEYEEIVHQVL 1132          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A8H7UV57_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UV57_9FUNG)

HSP 1 Score: 71.6 bits (174), Expect = 3.170e-11
Identity = 48/185 (25.95%), Postives = 85/185 (45.95%), Query Frame = 1
Query:   10 FSPWHPDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYY-FRMARRRDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            F+ +   ++RQLP  +   FPA++  +S + K +   M       VG   ++  + E H  H   +E +YY    + ++     S L   N   +  P+F  + +   Y+G  P    L+ V  ++ E            +DG IL GD S K+T  + +++    F  +YT LNE+ ++ +QVL
Sbjct:  251 FNGFDSRIIRQLPLRVQADFPALLTHKSGISKDLAKLMRPLFQNSVGPVTLSKILRELHAEHHATVELQYYDAACSEKKSPSIDSLLTKNNVEQKLLPEFSAFSNKELYNGFVPSPGYLSYVYSSIIEQIRPQLDWHMMSLDGNILKGDHSFKVTGHMGKLNGETTFTALYTCLNEYEEIRMQVL 435          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A8H7UTR8_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UTR8_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 4.090e-10
Identity = 44/179 (24.58%), Postives = 85/179 (47.49%), Query Frame = 1
Query:   28 DVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARR-RDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQVVLQVL 558
            D+  QL   +   FPA++  RS   K+++  +        G   +   +  NH      ++ +YY  +  +  +Q     L     T    P+F  ++D  G++G  P    ++ V  ++ +    + ++ + L+DG +L GD S KI K + +++    F  +YT+LNE+ ++ LQVL
Sbjct:  249 DLDEQLLPRVQADFPAVLTHRSGFSKQLVRLLRTQYQNAAGPHRMHQILRTNHTEKLDSIQFQYYDALNDKLNEQNMAKKLVRNVSTATTYPEFSTFNDRNGHNGYVPLANYISYVYCSIIDELRPYMNQHTSLLDGIVLKGDHSFKIIKHMAKINGVSTFSCLYTLLNEYEEIRLQVL 427          
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Match: A0A6A4I8D1_9AGAR (3'-5' exonuclease domain-containing protein n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4I8D1_9AGAR)

HSP 1 Score: 68.2 bits (165), Expect = 5.570e-10
Identity = 49/174 (28.16%), Postives = 81/174 (46.55%), Query Frame = 1
Query:   25 PDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVGLKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNPPQFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAGDESHKITKSI-RVSDAKVFQGVYTVLNEFNQV 543
            P ++ QL  +LV  FPA +  RS +DK ++  +   +   +        + E H V  H+L    Y R+    +QKQ       N  L  P  F  ++D  GY+G  P    L S+  +  E       +    +  RI+  D S K+ K + ++S   +F+G++TV+NEF Q+
Sbjct:  294 PKIMEQLSPELVAEFPAFLTHRSGIDKNLLALIRAGMAHWINANVWNMLLRELH-VREHDLRELQYLRLVAFENQKQDKENLPRN--LYQP--FPAFNDKQGYNGFYPSRWYLNSIYTSFVEHIRPILDQSMSALTSRIIKWDHSFKVPKFLMKLSGEPMFRGLFTVVNEFEQI 462          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13125.2369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A8H7UVI0_9FUNG1.060e-1526.633'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A8H7UST7_9FUNG1.630e-1425.133'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A8H4F4X9_MUCCL4.210e-1327.17Uncharacterized protein (Fragment) n=1 Tax=Mucor c... [more]
A0A168MI40_MUCCL6.630e-1327.173'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A8H7RP11_9FUNG6.690e-1327.533'-5' exonuclease domain-containing protein n=2 Ta... [more]
A0A168PC96_MUCCL2.160e-1226.633'-5' exonuclease domain-containing protein n=2 Ta... [more]
A0A0B7N4P0_9FUNG2.360e-1227.124a-hydroxytetrahydrobiopterin dehydratase n=4 Tax=... [more]
A0A8H7UV57_9FUNG3.170e-1125.95Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
A0A8H7UTR8_9FUNG4.090e-1024.58Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
A0A6A4I8D1_9AGAR5.570e-1028.163'-5' exonuclease domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13125contigE-fasciculatus_F_contig13125:1842..2546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.3
Seed ortholog evalue2.1e-12
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size567
Cds size567
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927817.7614455-CDS-E-fasciculatus_F_contig13125:1841..20561622927817.7614455-CDS-E-fasciculatus_F_contig13125:1841..2056Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13125 1842..2056 +
1695995707.3059623-CDS-E-fasciculatus_F_contig13125:1841..20561695995707.3059623-CDS-E-fasciculatus_F_contig13125:1841..2056Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13125 1842..2056 +
1622927817.774393-CDS-E-fasciculatus_F_contig13125:2194..25461622927817.774393-CDS-E-fasciculatus_F_contig13125:2194..2546Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13125 2195..2546 +
1695995707.319377-CDS-E-fasciculatus_F_contig13125:2194..25461695995707.319377-CDS-E-fasciculatus_F_contig13125:2194..2546Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13125 2195..2546 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13125.2369.1prot_E-fasciculatus_F_contig13125.2369.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13125 1842..2546 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13125.2369.1

>prot_E-fasciculatus_F_contig13125.2369.1 ID=prot_E-fasciculatus_F_contig13125.2369.1|Name=mRNA_E-fasciculatus_F_contig13125.2369.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp
SYKFSPWHPDVLRQLPRDLVMLFPAIICWRSAVDKKIITRMEQALVRGVG
LKAVADDIHENHLVHFHELETRYYFRMARRRDQKQGSFLPAENETLRNPP
QFGRWDDPLGYDGRSPGEALLASVRYAVFEGQEQWYHRRSQLVDGRILAG
DESHKITKSIRVSDAKVFQGVYTVLNEFNQVVLQVLCFS
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mRNA from alignment at E-fasciculatus_F_contig13125:1842..2546+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13125.2369.1 ID=mRNA_E-fasciculatus_F_contig13125.2369.1|Name=mRNA_E-fasciculatus_F_contig13125.2369.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=705bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13125:1842..2546+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCTACAAGTTCTCACCGTGGCATCCAGATGTTCTGCGGCAACTACCTCG TGACCTGGTTATGCTTTTCCCCGCCATCATCTGCTGGCGTAGTGCTGTCG ACAAGAAGATCATCACACGCATGGAGCAAGCGCTCGTGCGCGGTGTGGGG CTCAAAGCCGTTGCAGACGACATCCATGAAAACCATCTGGTGCATTTTCA TGAGCTGGAAACGCGGTGAGCAAAGAAGTGATTGCTGCCGCTCAACGTTG CAGTGGGTCAGGGTACCTTGCGCGTAGCGAATCAACGTTTATGGTGTTGT GGCTCCTCAAAAACTCTTGACTCCGACACTCTCTCGCGCCTCGATCCCTG TAGGTACTACTTTCGGATGGCGAGGAGACGAGACCAAAAGCAGGGATCTT TTTTGCCGGCGGAGAACGAGACATTGCGAAATCCTCCACAGTTCGGCAGG TGGGATGACCCGCTGGGGTACGACGGCAGGTCTCCAGGGGAGGCCCTTCT CGCCAGCGTGCGGTACGCGGTTTTCGAGGGCCAAGAGCAATGGTATCATC GGCGGTCGCAGCTGGTGGATGGGCGAATCTTGGCGGGCGATGAGTCTCAC AAGATCACCAAGTCGATCAGGGTATCAGACGCCAAGGTCTTCCAAGGAGT GTACACCGTGTTGAACGAGTTCAATCAGGTGGTGCTTCAGGTACTTTGTT TCTCT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13125:1842..2546+

>mRNA_E-fasciculatus_F_contig13125.2369.1 ID=mRNA_E-fasciculatus_F_contig13125.2369.1|Name=mRNA_E-fasciculatus_F_contig13125.2369.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1134bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13125:1842..2546+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCTACAAGTTCTCACCGTGGCATCCAGATGTTCTGCGGCAACTACCTCG
TGACCTGGTTATGCTTTTCCCCGCCATCATCTGCTGGCGTAGTGCTGTCG
ACAAGAAGATCATCACACGCATGGAGCAAGCGCTCGTGCGCGGTGTGGGG
CTCAAAGCCGTTGCAGACGACATCCATGAAAACCATCTGGTGCATTTTCA
TGAGCTGGAAACGCGAGCTACAAGTTCTCACCGTGGCATCCAGATGTTCT
GCGGCAACTACCTCGTGACCTGGTTATGCTTTTCCCCGCCATCATCTGCT
GGCGTAGTGCTGTCGACAAGAAGATCATCACACGCATGGAGCAAGCGCTC
GTGCGCGGTGTGGGGCTCAAAGCCGTTGCAGACGACATCCATGAAAACCA
TCTGGTGCATTTTCATGAGCTGGAAACGCGGTACTACTTTCGGATGGCGA
GGAGACGAGACCAAAAGCAGGGATCTTTTTTGCCGGCGGAGAACGAGACA
TTGCGAAATCCTCCACAGTTCGGCAGGTGGGATGACCCGCTGGGGTACGA
CGGCAGGTCTCCAGGGGAGGCCCTTCTCGCCAGCGTGCGGTACGCGGTTT
TCGAGGGCCAAGAGCAATGGTATCATCGGCGGTCGCAGCTGGTGGATGGG
CGAATCTTGGCGGGCGATGAGTCTCACAAGATCACCAAGTCGATCAGGGT
ATCAGACGCCAAGGTCTTCCAAGGAGTGTACACCGTGTTGAACGAGTTCA
ATCAGGTGGTGCTTCAGGTACTTTGTTTCTCTGTACTACTTTCGGATGGC
GAGGAGACGAGACCAAAAGCAGGGATCTTTTTTGCCGGCGGAGAACGAGA
CATTGCGAAATCCTCCACAGTTCGGCAGGTGGGATGACCCGCTGGGGTAC
GACGGCAGGTCTCCAGGGGAGGCCCTTCTCGCCAGCGTGCGGTACGCGGT
TTTCGAGGGCCAAGAGCAATGGTATCATCGGCGGTCGCAGCTGGTGGATG
GGCGAATCTTGGCGGGCGATGAGTCTCACAAGATCACCAAGTCGATCAGG
GTATCAGACGCCAAGGTCTTCCAAGGAGTGTACACCGTGTTGAACGAGTT
CAATCAGGTGGTGCTTCAGGTACTTTGTTTCTCT
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