mRNA_E-fasciculatus_F_contig131.2348.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig131.2348.1
Unique NamemRNA_E-fasciculatus_F_contig131.2348.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: D8LQJ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ9_ECTSI)

HSP 1 Score: 766 bits (1978), Expect = 2.850e-277
Identity = 405/464 (87.28%), Postives = 423/464 (91.16%), Query Frame = 1
Query:    1 MGAGASAKKRGAEGKLNGVVREKGDKKAGLLVAESKGSAVVGTTGDIGGGQKGAQSEESSEAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAMKNKKISAQPLKDIFAKEGLCIPQCWVVEKIQVEKDRALARAQKAAEKKSG-LGRTLFGKKK------------KKKTGEAQAVGEVKADDANETDTETESDEDVADNPVAGTEEGQASGYKYKALSKYEVFSFMRRVHDRAGAAMIETEEAAEDMHKAKKMVDMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPKLNGVKAKIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDMIEIRTKADGMKVGAIALSVSLAAVNDDKWGLLAMEQIKTSWGSANLYIHEKLAA 1353
            MGAGASAKKRGAEGKL GVVR KGDKKAG  VAESK SAVVGT GD GGGQKGAQSEE+SEAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAM+NKKISAQP+KDIFAKEGLCIPQCWV EK Q EKDRALARAQKAAEKK G LGR LFG               +KKTGE QAVGEV AD+ANETDTETESDE+VAD+P AGTE GQAS YKYKALSKYEVFSFMRRVHDRAGAAMI TEEA EDM KAKKMVD LYEHLPVQTLKEISQQNRINA LMQDS+AYGE+D+SHFLKVMVKLKRIHG+MMS GGSFWDLGSGVGKCVIAAAMMHNWESCYGVEC+EDLRAAARPTLERWRKEEVPKL+ VKA IRVDFINADAMKQKGWVAEATLLFVHTNFSAKD+IEI+TKADGMK+GAIALSVSLAAVN+DKWGLLA+EQIKTSWGSANLYIHEKLAA
Sbjct:    1 MGAGASAKKRGAEGKLKGVVRGKGDKKAG--VAESKRSAVVGTPGDAGGGQKGAQSEETSEAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAMRNKKISAQPMKDIFAKEGLCIPQCWVAEKAQAEKDRALARAQKAAEKKEGALGRILFGXXXXXXXXXXXXXXDRKKTGEGQAVGEVTADEANETDTETESDENVADDPAAGTEGGQASVYKYKALSKYEVFSFMRRVHDRAGAAMISTEEAVEDMRKAKKMVDTLYEHLPVQTLKEISQQNRINASLMQDSVAYGEIDISHFLKVMVKLKRIHGNMMSVGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECLEDLRAAARPTLERWRKEEVPKLHSVKANIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDIIEIKTKADGMKIGAIALSVSLAAVNEDKWGLLAVEQIKTSWGSANLYIHEKLAA 462          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: A0A6H5KZ72_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ72_9PHAE)

HSP 1 Score: 602 bits (1551), Expect = 2.980e-212
Identity = 319/389 (82.01%), Postives = 340/389 (87.40%), Query Frame = 1
Query:  154 KGAQSEESSEAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAMKNKKISAQPLKDIFAKEGLCIPQCWVVEKIQVEKDRALARAQKAAEKKSG-LGRTLFGKKK----------KKKTGEAQAVGEVKADDANETDTETESDEDVADNPVAGTEEGQASGYKYKALSKYEVFSFMRRVHDRAGAAMIETEEAAEDMHKAKKMVDMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWE--------------SCYGVECVEDLRAAARPTLERWRKEEVPKLNGVKAKIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDMIEIRTKADGMKVGAIALS 1245
            KGAQSEE+ +AFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAM+NKKISAQP+KDIFAKEGLCIPQCWV EK Q EKDRALAR QK+AEKK G LGRTLFGK+K          + +TGEAQAVGEVKAD+ANE DTETESDEDVAD+P A TE G AS YKYKALSKYEVFSFMRRVHDRAGAA+IETEEA EDM +AKKMVDMLYEHLPVQT+KEISQQNRINA LMQDS+AYGE+D+SHFLKVMVKLKRIHG+MMS GGSFWDLGSGVGKCVIAAAMMHNWE              SCYGVEC+EDLRAAARPTLERWRKEEV KLN VKAKIRVDFINADAM QKGWVAEATLLFVHTNFSAKD+IEI+TKADGMKV  +  S
Sbjct:   29 KGAQSEETPDAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAMRNKKISAQPMKDIFAKEGLCIPQCWVAEKTQAEKDRALARGQKSAEKKKGALGRTLFGKQKTVAAAVAGSDRNRTGEAQAVGEVKADEANEADTETESDEDVADHPAARTE-GGASVYKYKALSKYEVFSFMRRVHDRAGAAIIETEEAVEDMREAKKMVDMLYEHLPVQTVKEISQQNRINANLMQDSVAYGEIDISHFLKVMVKLKRIHGNMMSAGGSFWDLGSGVGKCVIAAAMMHNWEPITSFSHICFQRKKSCYGVECLEDLRAAARPTLERWRKEEVLKLNSVKAKIRVDFINADAMNQKGWVAEATLLFVHTNFSAKDIIEIKTKADGMKVRTVKKS 416          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: A0A8K1FEJ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEJ1_PYTOL)

HSP 1 Score: 109 bits (273), Expect = 2.690e-24
Identity = 68/203 (33.50%), Postives = 110/203 (54.19%), Query Frame = 1
Query:  742 LYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPKLNGVKAKIRVDFINADAMKQKGWVAEATLLFVH-TNFSAKDMIEIRTKADGMKVGAIALSVSLAAVNDDKWGLLAMEQIKTSWGSANLYIHEKL 1347
            +++  P    K+ S+  R    L   SL YGE+       +   ++   G ++  GG+F+D+GSG GK V+AAA++H++  C G+E ++ L A A   L+ WR + +  L  VK+ + V F   DA K   W  +ATL+F + T FS   M  + T AD +  GA  ++V+   V+  +W +L  ++   SWGSA + I +KL
Sbjct:    1 MFQAFPETEAKKASRLEREAKELGNRSLVYGEIPFETVDAIFQLMRTEFGALLDRGGNFYDIGSGCGKVVLAAALLHDFSKCCGIEVLDSLHAMALKALDHWRYKILDDLPTVKSDMDVGFAKNDATKVDIW-RDATLVFCNATCFSDSLMQALSTAADSLSDGAYVVTVTKPLVSK-RWKVLLEQKFAMSWGSATVIIQKKL 201          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: A0A3F2RRL3_9STRA (DOT1 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRL3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.500e-24
Identity = 71/226 (31.42%), Postives = 118/226 (52.21%), Query Frame = 1
Query:  673 GAAMIETEEAAEDMHKAKKMVDMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPKLNGVKAKIRVDFINADAMKQKGWVAEATLLFVH-TNFSAKDMIEIRTKADGMKVGAIALSVSLAAVNDDKWGLLAMEQIKTSWGSANLYIHEKL 1347
            GA   +     ED+ +     D L+   P   +K++S+  R    L   SL YGE+  +    +   ++   G ++  GG+F+DLGSG GK V+AAA++H++  C G+E ++ L A A   L+RWR + +  L   KA + V F   DA+K      +ATL+F + T FS   +  I T+AD + VG   ++V+   +   +W  +  E+   SWG A + + +K+
Sbjct:  294 GAVAAQNLTVVEDVERCH---DELFTEFPEPEVKKVSRLEREKKELANRSLVYGEIPFTTVDAIFQLMRTKFGVLLDKGGNFYDLGSGCGKVVMAAALLHDFSKCCGIEVLDGLHALALKVLDRWRYQMLDSLPATKADVDVGFAKGDAVKCPDVWRDATLVFCNSTCFSDSLLQAISTEADQLAVGTYFVTVT-KPLESTRWQAMHEEKFLMSWGRATVIVQKKM 515          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: D0NRI2_PHYIT (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NRI2_PHYIT)

HSP 1 Score: 108 bits (271), Expect = 7.260e-24
Identity = 70/208 (33.65%), Postives = 110/208 (52.88%), Query Frame = 1
Query:  736 DMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPK--LNGVKAKIRVDFINADAMKQKGWVAEATLLFVH-TNFSAKDMIEIRTK-ADGMKVGAIALSVSLAAVNDDKWGLLAMEQI-KTSWGSANLYIHEK 1344
            + LY   P+Q  K+ S++ R +   +  SL YGE+    F  V+  LKR H  +   GGSF D+GSG GK V AAA++H++++CYG+E +E L   ++  L+RW K   P   L+  K + R+ F   DA+    W A   L+F++ T F  + M     K A   K GAI ++ +    +   + +L    + + +WG A  Y+H K
Sbjct:    9 ETLYLEHPLQVSKKASREERRDREFISMSLVYGEIAFEPFKVVLDVLKRWHHVLNKPGGSFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHCISQEVLQRWEKIIKPNFALSMQKKRTRISFTQGDALAAD-WPANVDLVFLNSTCFGERLMYAFARKLALSCKPGAIVITATHKLPDTQNFSVLRQLTVTQEAWGDATWYLHRK 215          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: D0NBI9_PHYIT (DOT1 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NBI9_PHYIT)

HSP 1 Score: 108 bits (269), Expect = 2.430e-23
Identity = 73/237 (30.80%), Postives = 121/237 (51.05%), Query Frame = 1
Query:  670 AGAAMIETEEAAEDMHKAKKMVDMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCV----------IAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPKLNGVKAKIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDMIE-IRTKADGMKVGAIALSVSLAAVNDDKWGLLAMEQIKTSWGSANLYIHEKL 1347
            A AA+I T   A  +  A K    L+   P   +K++S   R    L   SL YGE+       +   ++   G ++  GGSF+D+GSG GK V          +AAA++H++  C GVE ++ L A A   L+RWR E +  L   K  + V F+  DA+K+     +ATL+F ++   +  +I+ I T+AD + VG+  ++V+   ++  +W  +  E+   SWG A +   +K+
Sbjct:    6 AEAAVISTGVTA--VEDAAKRHAELFVEFPELEVKKVSSLEREKKELANRSLVYGEIPFETVDAIFQLMRTQFGVLLDKGGSFYDIGSGCGKVVRVGYWFAGEVMAAALLHDFSKCCGVEVLDGLHAVALKVLDRWRFEMLDSLPATKVDVDVGFVKGDAVKRPDIWRDATLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLLST-RWQAMHEEKFHMSWGRATVIFQKKM 239          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: A0A6A3YS23_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YS23_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.510e-23
Identity = 72/220 (32.73%), Postives = 116/220 (52.73%), Query Frame = 1
Query:  706 EDMHKAKKMVDMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPK--LNGVKAKIRVDFINADAMKQKGWVAEATLLFVH-TNFSAKDMIEIRTK-ADGMKVGAIALSVSLAAVNDDKWGLLAMEQI---KTSWGSANLYIHEK 1344
            E M    ++ + LY+  P+Q  K+ S++ R     +  SL YGE+    F  V+  LKR H  +   GG+F D+GSG GK V AAA++H++++CYG+E +E L A ++  L RW K   P   L+  K + R+ F+  DA+    W A   L+F++ T F  + M  +  K A   K GAI ++ +      D    + + Q+   + +WG A  Y+H +
Sbjct:   67 ETMAAMTQIFETLYQEHPLQVAKKASREERREREYISMSLVYGEIAFVPFKVVLDVLKRWHHVLKKPGGTFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHAISQEVLGRWEKFIKPNFALSMQKKRTRITFVQGDALVVD-WPAHVDLVFLNSTCFGERLMHALARKLAQSCKSGAIVITATHKL--PDAQNFVELRQLTVTQEAWGDATWYLHRR 283          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: A0A7S2AHY7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AHY7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 9.380e-23
Identity = 66/215 (30.70%), Postives = 121/215 (56.28%), Query Frame = 1
Query:  736 DMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLER-WRKEEVPKLNGV----KAKIRVDFINADAMKQKGWVAEATLLFVHTN-FSAKDMIEIRTKADGMKVGAIALSVSL----AAVNDDKWGLLAMEQIKTSWGSANLYIHEKLA 1350
            + L+E       K  SQQ+R   G+   +L+YGEV+++ F K++ ++++I+GH  S  G F+D+GSGVGK V+ AAM H +E C G+E V  L   A   L R + ++ +P  +      ++  ++ FI ADA+++  W  EA+++F H + FS   M       + +  G++ ++ +     +A+    +  L  +++ TSWG   ++++EKL+
Sbjct:   61 ESLFESCSCSDAKRASQQDRRENGVCDPTLSYGEVEIAEFGKLLQRVQKIYGHCSSLKGKFYDIGSGVGKAVLLAAMFHGFELCCGIETVNGLHVIAEDKLSRDYVEKTIPMYSSEEKDERSHTKIRFIWADALEEDHW-QEASVVFAHASAFSGSMMRRFAQICELLGPGSLVITCTRPMPESALTRGLFLGLFKDRMATSWGVVKVFVYEKLS 274          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: G5A5C7_PHYSP (DOT1 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=G5A5C7_PHYSP)

HSP 1 Score: 106 bits (264), Expect = 1.260e-22
Identity = 64/215 (29.77%), Postives = 113/215 (52.56%), Query Frame = 1
Query:  742 LYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCV------------IAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPKLNGVKAKIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDMIE-IRTKADGMKVGAIALSVSLAAVNDDKWGLLAMEQIKTSWGSANLYIHEKL 1347
            L+   P   +K++S+  R    L   SL YGE+       +   ++   G ++  GG+F+D+GSG GK V            +AAA++H++  C G+E ++ L A A   L+RWR + +  L   KA + + F  ADA+K+     +ATL+F ++   +  +I+ I T+AD + VG+  ++V+   +   +W  +  E+   SWG A + I +K+
Sbjct:   28 LFAEFPEPEVKKVSRLEREKKELANRSLVYGEIPFETVDAIFQLMRTQFGVLLDKGGNFYDIGSGCGKVVRAGNVLTVEWQVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRYQMLDSLPATKADLDLGFAKADAVKRPDIWRDATLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVT-KPLQSTRWQAVHEEKFHMSWGRATVIIQKKM 241          
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Match: H3GN58_PHYRM (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GN58_PHYRM)

HSP 1 Score: 106 bits (265), Expect = 1.770e-22
Identity = 71/220 (32.27%), Postives = 114/220 (51.82%), Query Frame = 1
Query:  706 EDMHKAKKMVDMLYEHLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMMSTGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLERWRKEEVPK--LNGVKAKIRVDFINADAMKQKGWVAEATLLFVH-TNFSAKDMIEIRTK-ADGMKVGAIALSVSLAAVNDDKWGLLAMEQI---KTSWGSANLYIHEK 1344
            E M    ++ + LY+  P+Q  K+ S++ R     +  SL YGE+    F  V+  LKR H  ++  GG F D+GSG GK V AAA++H++++CYG+E +E L A +   L+RW     P   L+  K + R+ F   DA+    W A   L+F++ T F  + M  +  K A   K GAI ++ +      D    + + Q+   + +WG A  Y+H +
Sbjct:   56 ETMASLTQIFETLYQEHPLQVAKKTSREERREREFISMSLVYGEIAFVPFKVVVDVLKRWHHVLIKPGGVFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHAISHEVLQRWESIIKPNFSLSLQKKRTRISFTQGDALAVD-WPANIDLVFLNSTCFGERLMYALARKLAQCCKAGAIVITATHKL--PDTQNFVELRQLTVTQEAWGDATWYLHRR 272          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig131.2348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQJ9_ECTSI2.850e-27787.28DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KZ72_9PHAE2.980e-21282.01DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8K1FEJ1_PYTOL2.690e-2433.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RRL3_9STRA3.500e-2431.42DOT1 domain-containing protein n=3 Tax=Phytophthor... [more]
D0NRI2_PHYIT7.260e-2433.65Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
D0NBI9_PHYIT2.430e-2330.80DOT1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A6A3YS23_9STRA4.510e-2332.73Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2AHY7_9STRA9.380e-2330.70Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
G5A5C7_PHYSP1.260e-2229.77DOT1 domain-containing protein n=14 Tax=Phytophtho... [more]
H3GN58_PHYRM1.770e-2232.27Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig131contigE-fasciculatus_F_contig131:23068..26292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score773.5
Seed ortholog evalue5.5e-221
Seed eggNOG ortholog2880.D8LQJ9
EggNOG free text desc.Histone methylation protein DOT1
EggNOG OGs2BR00@1,2STQA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1356
Cds size1356
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig131.2348.1prot_E-fasciculatus_F_contig131.2348.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig131 23068..26292 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927814.6523051-CDS-E-fasciculatus_F_contig131:23067..231991622927814.6523051-CDS-E-fasciculatus_F_contig131:23067..23199Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 23068..23199 -
1695995706.0597117-CDS-E-fasciculatus_F_contig131:23067..231991695995706.0597117-CDS-E-fasciculatus_F_contig131:23067..23199Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 23068..23199 -
1622927814.6683698-CDS-E-fasciculatus_F_contig131:23561..237261622927814.6683698-CDS-E-fasciculatus_F_contig131:23561..23726Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 23562..23726 -
1695995706.071518-CDS-E-fasciculatus_F_contig131:23561..237261695995706.071518-CDS-E-fasciculatus_F_contig131:23561..23726Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 23562..23726 -
1622927814.6828299-CDS-E-fasciculatus_F_contig131:23908..239861622927814.6828299-CDS-E-fasciculatus_F_contig131:23908..23986Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 23909..23986 -
1695995706.0805538-CDS-E-fasciculatus_F_contig131:23908..239861695995706.0805538-CDS-E-fasciculatus_F_contig131:23908..23986Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 23909..23986 -
1622927814.6945224-CDS-E-fasciculatus_F_contig131:24279..243991622927814.6945224-CDS-E-fasciculatus_F_contig131:24279..24399Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 24280..24399 -
1695995706.089141-CDS-E-fasciculatus_F_contig131:24279..243991695995706.089141-CDS-E-fasciculatus_F_contig131:24279..24399Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 24280..24399 -
1622927814.7074127-CDS-E-fasciculatus_F_contig131:24855..255601622927814.7074127-CDS-E-fasciculatus_F_contig131:24855..25560Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 24856..25560 -
1695995706.100623-CDS-E-fasciculatus_F_contig131:24855..255601695995706.100623-CDS-E-fasciculatus_F_contig131:24855..25560Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 24856..25560 -
1622927814.721306-CDS-E-fasciculatus_F_contig131:26136..262921622927814.721306-CDS-E-fasciculatus_F_contig131:26136..26292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 26137..26292 -
1695995706.109174-CDS-E-fasciculatus_F_contig131:26136..262921695995706.109174-CDS-E-fasciculatus_F_contig131:26136..26292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 26137..26292 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig131.2348.1

>prot_E-fasciculatus_F_contig131.2348.1 ID=prot_E-fasciculatus_F_contig131.2348.1|Name=mRNA_E-fasciculatus_F_contig131.2348.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=452bp
MGAGASAKKRGAEGKLNGVVREKGDKKAGLLVAESKGSAVVGTTGDIGGG
QKGAQSEESSEAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAMKNKK
ISAQPLKDIFAKEGLCIPQCWVVEKIQVEKDRALARAQKAAEKKSGLGRT
LFGKKKKKKTGEAQAVGEVKADDANETDTETESDEDVADNPVAGTEEGQA
SGYKYKALSKYEVFSFMRRVHDRAGAAMIETEEAAEDMHKAKKMVDMLYE
HLPVQTLKEISQQNRINAGLMQDSLAYGEVDMSHFLKVMVKLKRIHGHMM
STGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECVEDLRAAARPTLERWR
KEEVPKLNGVKAKIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDMIEI
RTKADGMKVGAIALSVSLAAVNDDKWGLLAMEQIKTSWGSANLYIHEKLA
A*
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mRNA from alignment at E-fasciculatus_F_contig131:23068..26292-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig131.2348.1 ID=mRNA_E-fasciculatus_F_contig131.2348.1|Name=mRNA_E-fasciculatus_F_contig131.2348.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3225bp|location=Sequence derived from alignment at E-fasciculatus_F_contig131:23068..26292- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGAGCGGGAGCTTCGGCCAAGAAACGTGGAGCGGAAGGCAAATTGAA TGGCGTTGTTCGGGAAAAGGGCGATAAAAAAGCCGGGCTACTTGTAGCCG AGAGTAAGGGATCGGCCGTGGTTGGGACGACAGGAGACATTGGCGGAGGA CAGAAGGTAGACTTCCGATGAAACATGCCAGCTTCAGAAAAGTCGAACAT GAACGTTAAGTCTAGACTACTGCCGTGGAGCCTCCACTCTACATGCACAT ATACGACCATTCAGTATTTACGGATGGGTTGCAAGTTCATGTACACCGAA TGCGCTGTACATAAATTGTATGCGTAGCTGCTTGTGCAACTTACTCCAAG AGACGCGCCAAATAGCCGAGTCTCACGCTAAACACCATGCGCTTTAGTCG CATAGACCATTGCAGCATGGTTTCCCACCTCTGTGGCCAGCAGGGAAAGC CTTGTAGCAGAAGTACAGTAGTGATCCCCACATCATTCACCGGCTGGGAT AGCGTCCCCAGTTCCTCTGCACCGGGCGATAGTGTAGTGTTCTACGAGTG TCTCCAGCAAGCACGCAACAACGGCACACGTGACTGTCATCACTCGCCGT GCATATTGCTTACATTCAGTGCAAGTACACAAAGGTTGGCAGTTAATGAT GGCATTTTACAACACCCTTCGGTCCGTGACCGGCGCGTTTACCGCACACG TACATGCTGCTTGATCGACAATAAATGGCAAGGGTGCGCAGAGCGAAGAA AGTTCCGAAGCATTCGAGGGAGTGGAAGACGTCCTATGCCGACTCGCTCA GACTCACCCGACCCAGACGCCGGAGCGCTGGGAACTCATCACCCAAAAGC TGAATCGAGCTATGAAGAATAAGAAAATCTCCGCCCAGCCCTTGAAGGAT ATATTTGCCAAGGAAGGTCTCTGCATCCCACAGTGCTGGGTGGTCGAGAA GATTCAAGTCGAAAAGGACCGAGCTCTGGCGCGAGCTCAGAAGGCTGCGG AGAAGAAGAGTGGGTTGGGTAGGACCTTATTCGGAAAGAAGAAGAAGAAG AAGACGGGAGAAGCCCAAGCGGTTGGAGAAGTCAAAGCTGACGACGCAAA CGAGACCGACACTGAGACGGAGTCCGATGAGGACGTTGCAGACAACCCTG TGGCAGGGACAGAAGAAGGACAAGCATCGGGATACAAATACAAGGCTCTC TCGAAATACGAGGTATTCTCCTTCATGCGGAGGGTCCATGATCGAGCCGG TGCTGCAATGATTGAAACGGAAGAAGCCGCCGAAGATATGCACAAGGCCA AAAAGATGGTTGACATGCTATATGAGCACCTTCCTGTTCAGACGTTGAAG GAGATTTCGCAACAGAACCGGATCAACGCTGGCCTGATGCAGGACTCTCT CGCTTACGGAGAAGTCGACATGTCTCATTTTTTGAAGGTATTTATGGTTG CGAAGATGTTGAACACGTTCAGACCAGGTAGGGATGGTCGATACGTGGAC CTTCAAAAGCTTCGCAGCCCACAACATTGCGCAACCAACTGCTGCGAGGT GTGTACGGTAGACGTTGGGCCAAGTCTTGCAACAAGCACAAGCTAGTGCG GTGAACTGCGACTTAGCTTTCTTCAGTAGGTGCTGAGTTGCTCACGCCTG GGTAGTGCTTTCCCTGCCCGACTGGAAGATGTAAAGAGCGGTACTCGTAT GGGTAGACGCCTTTCCCGAGCGAATATGCTTGGCTACGAGCAGGCAGTGT GCGGGAACGAACACAGTAAGAATCGTTGAGTTGTGAACAGCGTGTGCGCG CGCTTTGGCTGTGATGGTGCCGTCAATCCAGGGACCTTATGCGAAATTCC GTTGTTCTGCTTGGACTGACACTGTTACTGTCTTCTGGACCAGGTGATGG TGAAATTGAAGCGAATTCACGGACACATGATGTCTACCGGCGGAAGTTTT TGGGACCTTGGGTCCGGTGTTGGGAAGTGCGTGATTGCTGCAGCGATGAT GCACAATTGGGAGGTGAGCATGTCCACCACACGAGCAGGACGCTGTATCG TATTGGTATACAGTCTAGAGCAGAGGCACCACACTCTTGTGCATATGTAT GCTTTTCAGCCTTCGAGACAAAAGCGTTAAGATGTAACTGGCGTGCCCCC GATTGTTGACACCTAGGTGGTGTTTTGAGTTGTCGCCCACTAGCTCGTGG TCTGCGGATCGAGACGAATCCCAATCTGTCCGAATGCTACACTGGTCCAA CTGCTCTGATCAGCCCATCACCTGGTTTTCTCGTGAATTGTTTCCAACGA CAAAAGTCATGCTACGGCGTTGAGTGTGTCGAGGATTTGCGAGCAGCAGC GAGGCCCACGCTAGAGAGATGGAGAAAGGAGGAGGTGAGAAGACGAACGC ACCCCGTACTGAGGCCGCTTCACGCGCGAAGGCTCTACAAAGTAATGCAG TACTATGCCGATCGATAGGCAGGTCATTGTCATTTGAACGTTTTGAGTAG CTTGACTTTCGTAAATCAATGTCGGAGTCACGATGGCTGGGTCTGCACCG CGATCCTCTTCTTCAGGTACCTAAGCTAAATGGTGTTAAAGCCAAAATTC GGGTGGACTTTATCAACGCCGACGCTATGAAGCAAAAAGGCTGGGTGGCG GAGGCTACTCTCCTTTTCGTGCACACCAACTTTTCGGCGAAGGATATGAT CGAGATAAGAACAAAGGCCGATGGTATGAAGGTAAGCATCGCCAAACGGA CGTCGGGCTCCTGTCCGGCGATCCTCGCTGTGCAGCACGTTACGCCTTGA CGTCCTAATTCGGTCGGAATAACGACGTCTCGAGATAAGTTCATGGATTT TGTGTACAGTTTGTTGGCAAGATCGAGTCGCATGAGGTGCAGCAGGATAG TTAAACGTGCAACTGCTCTCCACGAAGCCAAGATGGGCCAACATGTCGGG GAGGTGAACACAGAATGTGCTCGCTTGTCTTCTCCTATGCTTTCCTGCGC TGGGCCTCTTTGCACGGTGCAATTCTCCACGGCACTGCATAAGAGGCCAT CCAAATGCTCCACTGCACGCGCGGCTCCGTTGTTGTACCCCAGGTCGGCG CAATCGCCTTATCGGTCTCACTCGCGGCAGTGAACGACGACAAATGGGGC TTGCTAGCCATGGAGCAGATAAAGACTTCGTGGGGGTCTGCAAATCTCTA CATTCACGAAAAACTTGCAGCCTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig131:23068..26292-

>mRNA_E-fasciculatus_F_contig131.2348.1 ID=mRNA_E-fasciculatus_F_contig131.2348.1|Name=mRNA_E-fasciculatus_F_contig131.2348.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2712bp|location=Sequence derived from alignment at E-fasciculatus_F_contig131:23068..26292- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGAGCGGGAGCTTCGGCCAAGAAACGTGGAGCGGAAGGCAAATTGAA
TGGCGTTGTTCGGGAAAAGGGCGATAAAAAAGCCGGGCTACTTGTAGCCG
AGAGTAAGGGATCGGCCGTGGTTGGGACGACAGGAGACATTGGCGGAGGA
CAGAAGATGGGAGCGGGAGCTTCGGCCAAGAAACGTGGAGCGGAAGGCAA
ATTGAATGGCGTTGTTCGGGAAAAGGGCGATAAAAAAGCCGGGCTACTTG
TAGCCGAGAGTAAGGGATCGGCCGTGGTTGGGACGACAGGAGACATTGGC
GGAGGACAGAAGGGTGCGCAGAGCGAAGAAAGTTCCGAAGCATTCGAGGG
AGTGGAAGACGTCCTATGCCGACTCGCTCAGACTCACCCGACCCAGACGC
CGGAGCGCTGGGAACTCATCACCCAAAAGCTGAATCGAGCTATGAAGAAT
AAGAAAATCTCCGCCCAGCCCTTGAAGGATATATTTGCCAAGGAAGGTCT
CTGCATCCCACAGTGCTGGGTGGTCGAGAAGATTCAAGTCGAAAAGGACC
GAGCTCTGGCGCGAGCTCAGAAGGCTGCGGAGAAGAAGAGTGGGTTGGGT
AGGACCTTATTCGGAAAGAAGAAGAAGAAGAAGACGGGAGAAGCCCAAGC
GGTTGGAGAAGTCAAAGCTGACGACGCAAACGAGACCGACACTGAGACGG
AGTCCGATGAGGACGTTGCAGACAACCCTGTGGCAGGGACAGAAGAAGGA
CAAGCATCGGGATACAAATACAAGGCTCTCTCGAAATACGAGGTATTCTC
CTTCATGCGGAGGGTCCATGATCGAGCCGGTGCTGCAATGATTGAAACGG
AAGAAGCCGCCGAAGATATGCACAAGGCCAAAAAGATGGTTGACATGCTA
TATGAGCACCTTCCTGTTCAGACGTTGAAGGAGATTTCGCAACAGAACCG
GATCAACGCTGGCCTGATGCAGGACTCTCTCGCTTACGGAGAAGTCGACA
TGTCTCATTTTTTGAAGGGTGCGCAGAGCGAAGAAAGTTCCGAAGCATTC
GAGGGAGTGGAAGACGTCCTATGCCGACTCGCTCAGACTCACCCGACCCA
GACGCCGGAGCGCTGGGAACTCATCACCCAAAAGCTGAATCGAGCTATGA
AGAATAAGAAAATCTCCGCCCAGCCCTTGAAGGATATATTTGCCAAGGAA
GGTCTCTGCATCCCACAGTGCTGGGTGGTCGAGAAGATTCAAGTCGAAAA
GGACCGAGCTCTGGCGCGAGCTCAGAAGGCTGCGGAGAAGAAGAGTGGGT
TGGGTAGGACCTTATTCGGAAAGAAGAAGAAGAAGAAGACGGGAGAAGCC
CAAGCGGTTGGAGAAGTCAAAGCTGACGACGCAAACGAGACCGACACTGA
GACGGAGTCCGATGAGGACGTTGCAGACAACCCTGTGGCAGGGACAGAAG
AAGGACAAGCATCGGGATACAAATACAAGGCTCTCTCGAAATACGAGGTA
TTCTCCTTCATGCGGAGGGTCCATGATCGAGCCGGTGCTGCAATGATTGA
AACGGAAGAAGCCGCCGAAGATATGCACAAGGCCAAAAAGATGGTTGACA
TGCTATATGAGCACCTTCCTGTTCAGACGTTGAAGGAGATTTCGCAACAG
AACCGGATCAACGCTGGCCTGATGCAGGACTCTCTCGCTTACGGAGAAGT
CGACATGTCTCATTTTTTGAAGGTGATGGTGAAATTGAAGCGAATTCACG
GACACATGATGTCTACCGGCGGAAGTTTTTGGGACCTTGGGTCCGGTGTT
GGGAAGTGCGTGATTGCTGCAGCGATGATGCACAATTGGGAGGTGATGGT
GAAATTGAAGCGAATTCACGGACACATGATGTCTACCGGCGGAAGTTTTT
GGGACCTTGGGTCCGGTGTTGGGAAGTGCGTGATTGCTGCAGCGATGATG
CACAATTGGGAGTCATGCTACGGCGTTGAGTGTGTCGAGGATTTGCGAGC
AGCAGCGAGGCCCACGCTAGAGAGATGGAGAAAGGAGGAGTCATGCTACG
GCGTTGAGTGTGTCGAGGATTTGCGAGCAGCAGCGAGGCCCACGCTAGAG
AGATGGAGAAAGGAGGAGGTACCTAAGCTAAATGGTGTTAAAGCCAAAAT
TCGGGTGGACTTTATCAACGCCGACGCTATGAAGCAAAAAGGCTGGGTGG
CGGAGGCTACTCTCCTTTTCGTGCACACCAACTTTTCGGCGAAGGATATG
ATCGAGATAAGAACAAAGGCCGATGGTATGAAGGTACCTAAGCTAAATGG
TGTTAAAGCCAAAATTCGGGTGGACTTTATCAACGCCGACGCTATGAAGC
AAAAAGGCTGGGTGGCGGAGGCTACTCTCCTTTTCGTGCACACCAACTTT
TCGGCGAAGGATATGATCGAGATAAGAACAAAGGCCGATGGTATGAAGGT
CGGCGCAATCGCCTTATCGGTCTCACTCGCGGCAGTGAACGACGACAAAT
GGGGCTTGCTAGCCATGGAGCAGATAAAGACTTCGTGGGGGTCTGCAAAT
CTCTACATTCACGAAAAACTTGCAGCCTGAGTCGGCGCAATCGCCTTATC
GGTCTCACTCGCGGCAGTGAACGACGACAAATGGGGCTTGCTAGCCATGG
AGCAGATAAAGACTTCGTGGGGGTCTGCAAATCTCTACATTCACGAAAAA
CTTGCAGCCTGA
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