prot_E-fasciculatus_F_contig13057.2317.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13057.2317.1
Unique Nameprot_E-fasciculatus_F_contig13057.2317.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length342
Homology
BLAST of mRNA_E-fasciculatus_F_contig13057.2317.1 vs. uniprot
Match: D7G8G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G7_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 1.280e-87
Identity = 189/290 (65.17%), Postives = 204/290 (70.34%), Query Frame = 0
Query:   59 ALSNCENGYAGWQTNEACCSEFCGQCGGDGCGARGSADCCYENIISAGLVCGVDTLEAPCIIVAFTPAPLAEGETAAPLPAPTSAPPXXXXXXXXXXXXXXXXXXXPAAPVAPVAGXXXXXXXXXXXXXSPASRGVVGVPTPSPGGTVAPSETVXXXXXXXXXXXXXXXX--SATECGDGIEGFRTNVACCSASCGQCGGPGCENLEGGASECCPHDIIVAGNSCSDTGVAPCVIDTVEEVDXXXXXXXXXXXXXXXXX-----RGGRALLVVPWAVAALLSTAGFRRYN 341
            A SNCENGYAGWQ NEACCSEFCGQCGG GCG  GSA CC++NII+AG VCGVD LEAPCII+ FTPAPLAEGETAAPLPAPTS   XXXXXXXXXXXXXXXXXXX       VA   XXXXXXXX   SP SRG VG PT SPGG+ AP E+V XXXXX            S  EC DGIEGFR  VACCS SCGQCGG GCE LEGGA ECC HD++   +SCS+TG APCV+  V EVD                      RGGR LLV+PWAV+A+L+ AGFR YN
Sbjct:  178 ATSNCENGYAGWQNNEACCSEFCGQCGGSGCGELGSATCCFDNIINAGKVCGVDVLEAPCIIINFTPAPLAEGETAAPLPAPTSXX-XXXXXXXXXXXXXXXXXXXXXXXXXXVAETEXXXXXXXXATESPVSRGGVGTPTSSPGGSEAPQESVAXXXXXPVGGGVGTTPAPSTPECADGIEGFRHGVACCSVSCGQCGGTGCEYLEGGALECCSHDVLTTNSSCSETGEAPCVLGPVSEVDGAADADTTTSSGRAANRIAGGGRGGRVLLVLPWAVSAMLNAAGFRLYN 466          
BLAST of mRNA_E-fasciculatus_F_contig13057.2317.1 vs. uniprot
Match: A0A6H5JJ70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ70_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 1.540e-82
Identity = 176/290 (60.69%), Postives = 193/290 (66.55%), Query Frame = 0
Query:   59 ALSNCENGYAGWQTNEACCSEFCGQCGGDGCGARGSADCCYENIISAGLVCGVDTLEAPCIIVAFTPAPLAEGETAAPLPAPTSAPPXXXXXXXXXXXXXXXXXXXPAAPVAPVAGXXXXXXXXXXXXXSPASRGVVGVPTPSPGGTVAPSETVXXXXXXXXXXXXXXXX--SATECGDGIEGFRTNVACCSASCGQCGGPGCENLEGGASECCPHDIIVAGNSCSDTGVAPCVIDTVEEVDXXXXXXXXXXXXXXXXX-----RGGRALLVVPWAVAALLSTAGFRRYN 341
            A S CENGY GWQ+NEACCSEFCGQCGG GCG  GSA CCY+NIISAGLVCGVD LEAPCII+ +TPAPLAEG T     AP +A      XXXXXXXXXXXXXXX          XXXXXXXXX    SP SRG VGVPTPSPGG+ AP E+V                  SA EC DGIEGFR  VACCS SCGQCGG GCENLEGGASECC HD++   N CS++GVAPCV+  V +VD                      RG R LLV+PWAV+AL++TAGFR YN
Sbjct:  187 ASSYCENGYPGWQSNEACCSEFCGQCGGSGCGELGSATCCYDNIISAGLVCGVDVLEAPCIIINYTPAPLAEGVT-----APATA------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATESPVSRGDVGVPTPSPGGSEAPQESVPPSVTPPVGGAVGTTPAPSAPECDDGIEGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSESGVAPCVLGPVSQVDGAADADTTTSSGEAANRIAGGGRGVRVLLVLPWAVSALINTAGFRLYN 465          
BLAST of mRNA_E-fasciculatus_F_contig13057.2317.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 7.140e-6
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0
Query:  233 CGDGIEGFRTNVA--CCSASCGQCGGPGCENLEGGASECCPHDIIVAGNSCSDTGVAPCVID 292
            C +G+ G  + +   CC ASCG CGG GC+   G A ECC  +I+  G  CS TG APC +D
Sbjct:  674 CTNGVAGVESTMGEVCCPASCGHCGGVGCDE-RGAADECCTTEIMDYGQPCSVTGTAPCYLD 734          
BLAST of mRNA_E-fasciculatus_F_contig13057.2317.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 8.180e-6
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0
Query:  233 CGDGIEGFRTNVA--CCSASCGQCGGPGCENLEGGASECCPHDIIVAGNSCSDTGVAPCVID 292
            C +G+ G  + +   CC ASCG CGG GC+   G A ECC  +I+  G  CS TG APC +D
Sbjct: 1177 CTNGVPGVESTMGEVCCPASCGHCGGVGCDE-RGAADECCTTEIMDYGQPCSVTGTAPCYLD 1237          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13057.2317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G8G7_ECTSI1.280e-8765.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ70_9PHAE1.540e-8260.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK3_9PHAE7.140e-646.77VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHN6_ECTSI8.180e-646.77Glycin-rich protein n=1 Tax=Ectocarpus siliculosus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13057contigE-fasciculatus_F_contig13057:10..2772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13057.2317.1mRNA_E-fasciculatus_F_contig13057.2317.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13057 10..2772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13057.2317.1 ID=prot_E-fasciculatus_F_contig13057.2317.1|Name=mRNA_E-fasciculatus_F_contig13057.2317.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=342bp
TPTAATATAPPSFSPTSGPQPTAAVATTAEPVAAAAPTASPAAAPTAGSF
TPVAPVAGALSNCENGYAGWQTNEACCSEFCGQCGGDGCGARGSADCCYE
NIISAGLVCGVDTLEAPCIIVAFTPAPLAEGETAAPLPAPTSAPPATAAP
ATPAPLTAAPDTAAPAAPVAPVAGTEAPSTPTPVATESPASRGVVGVPTP
SPGGTVAPSETVASDAPPVGGGVGTPAPSATECGDGIEGFRTNVACCSAS
CGQCGGPGCENLEGGASECCPHDIIVAGNSCSDTGVAPCVIDTVEEVDDD
TTSSGGPAHRIAGGGRGGRALLVVPWAVAALLSTAGFRRYN*
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