mRNA_E-fasciculatus_F_contig13032.2298.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13032.2298.1
Unique NamemRNA_E-fasciculatus_F_contig13032.2298.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 3.900e-131
Identity = 182/201 (90.55%), Postives = 192/201 (95.52%), Query Frame = 1
Query:    1 QLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDLLPWVR 603
            +LASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTA+GSF+GRWAEA+AMYEKIM+EGERINYITVVR  RSHFLSYYYYYVQPEVQ LSVQHFFGSNR+DPQFQYQRRRLTNPLCAEFGIHNGE+LA FIETELPDFRLVLLTE FDEGLMMMRR+LGWEMIDMTYSRMMETKAGG RWDGKELK VPHW+DL  WV+
Sbjct:   65 KLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQ-LSVQHFFGSNRQDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGARWDGKELKNVPHWEDLPTWVQ 264          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.200e-126
Identity = 180/201 (89.55%), Postives = 190/201 (94.53%), Query Frame = 1
Query:    1 QLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDLLPWVR 603
            +LASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYT +GSF+GRWAEA+AMYEKIM+EGERINYITVVR  RSHFLSYYYYYVQPEVQ LSVQHFFGSNR+DPQFQYQRRRLTNPLCAEFGIHNGE+LA FIETELPDFRLVLLTE FDEGLMMMRR+LGWEMIDMTYSRMMETKAGG RWDGKELK VP W+DL  WV+
Sbjct:  254 KLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQ-LSVQHFFGSNREDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGTRWDGKELKNVPRWEDLPTWVQ 453          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: D7G4H5_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 4.160e-70
Identity = 111/201 (55.22%), Postives = 142/201 (70.65%), Query Frame = 1
Query:    1 QLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDLLPWVR 603
            +LASF G  VS +PL  AVQQ++E+G+RVDVMHYH    G +EG W +   MY++IMQE E INYITVVR PR HFLSYYYYY+QP + +LS++ +    ++ P      + + NP+C EFG+H+ ++L  FIE  LP F LV+LTEEFD GLM +RRL+GW+MIDMTYS MMETK G  RWD K L  VP +  L  WV+
Sbjct:   43 KLASFEGRFVSNVPLAVAVQQVQENGQRVDVMHYHVHE-GVWEGTWEDNTKMYKQIMQEAEPINYITVVRSPREHFLSYYYYYMQP-MNKLSIEQYLERTKRHP-----AQHMMNPMCVEFGVHDKDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFASLPQWVQ 236          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: A0A6H5JVG3_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 5.760e-69
Identity = 111/201 (55.22%), Postives = 142/201 (70.65%), Query Frame = 1
Query:    1 QLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDLLPWVR 603
            +LASF G  VS +PL  AVQQ++ESG+RVDVMHYH    G +EG W +   MY++IMQ+ E INYITVVR PR HFLSYYYYY+QP + +LS++ +    ++ P      + + NP+C EFG+H+ ++L  FIE  LP F LV+LTEEFD GLM +RRL+GW+MIDMTYS MMETK G  RWD K L  VP +  L  WV+
Sbjct:  143 KLASFEGRFVSNVPLAVAVQQVQESGQRVDVMHYHVHE-GVWEGTWEDNTNMYQQIMQDAEPINYITVVRSPREHFLSYYYYYMQP-MNKLSIEQYLERTKRHP-----AQHMMNPMCLEFGVHDEDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFVSLPQWVQ 336          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.050e-57
Identity = 100/198 (50.51%), Postives = 137/198 (69.19%), Query Frame = 1
Query:    1 QLASFGGNHVSAIPLTEAVQQIE--ESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDL 588
            +LA F  +H SAIPL EAVQQ E  +   R D+MHYH +AFG FEG W +A   Y +I++  + +N++TVVR+PRSH LSYYYY++QP+ Q+   +  F +  K P+     RRL NPL AEFG+   ++L + +E  LP+ ++VLLTEEFDEGLM++RRLL WEM+DMTY  + +T AG  R+DGK L   P ++DL
Sbjct:  129 KLAHFD-DHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQKTIGE--FLTQAKHPRDPI-HRRLFNPLSAEFGVKKRQDLRYVLEKALPNAKMVLLTEEFDEGLMVLRRLLRWEMVDMTYVSVYKTTAGARRYDGKPLVNAPRFEDL 322          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 8.080e-55
Identity = 103/214 (48.13%), Postives = 141/214 (65.89%), Query Frame = 1
Query:    4 LASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRK--DPQFQ--YQRRR-----------LTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDLLPWV 600
            +A F G H S+I L EA   IE+SG+ VD+MHYH+   G +EG WAEA+A Y+KIM++  ++N +TV+R+P +H++SYYYY++QPE   LS+  +F  + K  DP+++  +QRRR           L NPLCAEFGI    EL  FI  +L  F +VLLTE F+EGL +  R+  W  IDMT+ R++ETKAG  R+DGK+L  VP   DL P V
Sbjct:   56 VAHFHG-HQSSIELPEA---IEDSGKPVDLMHYHHAWDGFYEGGWAEAKAAYKKIMRDPTKVNLVTVMREPVAHYMSYYYYFLQPETG-LSIAEYFELSAKPGDPRYRGVFQRRRAGKAGWHGFKLLHNPLCAEFGIRTATELESFIRDDLQGFAMVLLTEHFEEGLAVFMRMFNWRPIDMTFCRVIETKAGVSRYDGKKLTNVPKTRDLPPEV 264          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.560e-51
Identity = 90/196 (45.92%), Postives = 128/196 (65.31%), Query Frame = 1
Query:    1 QLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDL 588
            +L+ FGG+ V+   L  A  + +E+G+RVD+MHYH +  G + G W EA   Y  IM+  + IN++TV+R+PRSH LSYYYY++QP + Q S++ F  S  ++     + R L+NPL AEFG+   EE+  FI + LPDF+LVL+    DEGL+ + R+L W MID+TY  + ETK G  RWDGK + T P +D L
Sbjct:   79 KLSYFGGSSVT--DLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQP-LHQQSIEEFLLSGHRN---NIEHRMLSNPLSAEFGVRTAEEMDSFISSALPDFKLVLM--RLDEGLLTLGRMLHWHMIDLTYCDLNETKEGSRRWDGKTVVTWPQFDSL 266          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 2.410e-50
Identity = 85/193 (44.04%), Postives = 126/193 (65.28%), Query Frame = 1
Query:   16 GGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDLLP 594
            GG +V    L  A +Q+ + G+RVD+MHYH+   G + G W +A A Y KIM     +NY+TV+R+P +H+LSYYYY++ P + ++ +  +   N         ++ L NPL AEFGI +  ++ HFI+ ++P F++VLLTE FDEGL +++R+L W+ IDMTY +M++TK G  RWDGK L+ VP   DL P
Sbjct:  199 GGTYVD---LDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNP-INKMPIDEYLLKNPH-------KKLLYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTYCKMLQTKKGEMRWDGKPLENVPKISDLAP 380          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 3.260e-48
Identity = 89/198 (44.95%), Postives = 123/198 (62.12%), Query Frame = 1
Query:    1 QLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQF--QYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDL 588
            +LA FG    +   L +A  Q  +SGE VDVMHYH +  G + G W +A   + +IM+  + INY+TV+R+PRSH LS YY+Y+ PE + LS++ +      DP       R RL NPL AEFG+   +E+  FI   LPDF+LV+LTE  DE L+++R LLGW MID+TY+ +  T+AG  R+DGK L   P +  L
Sbjct:   84 KLAHFGKGKGTIANLKKAATQTRKSGELVDVMHYHISHSGEYTGTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECE-LSIEDYL----MDPAHAGDENRHRLRNPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTYASLNATRAGARRYDGKPLIDRPDFCHL 276          
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Match: A0A6H5KIJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ9_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.230e-45
Identity = 83/208 (39.90%), Postives = 124/208 (59.62%), Query Frame = 1
Query:   31 SAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEARAMYEKIMQE----------------------GERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSNRKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFDEGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDL 588
            +A+ L  A ++ +ESG RVD+ HYH+   G FE  WA AR +++ IM E                      G    ++TV+RDP  H+LSY+Y+Y +PE++ + V+ +F S R      +++R L NPL AEFGI+N  +L  F+   LP F L +LTEE DEGL+++ R++GW+ ID+TY+ ++E + GG RWD K +K  P   DL
Sbjct:  264 TAVTLEHAAEETKESGNRVDIFHYHHVWNGYFESTWARARELFKDIMAEPVAPAAXXXXXXXXXXEPRESSGGGTKFVTVLRDPIDHWLSYFYFYYEPEMK-IDVEEYFSSGR------HKKRPLNNPLAAEFGIYNERDLDEFVLNHLPSFALTMLTEEVDEGLVLLGRVMGWDPIDITYASLLEARNGGVRWDDKPIKKAPRLKDL 464          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13032.2298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI84_ECTSI3.900e-13190.55Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JL02_9PHAE1.200e-12689.55ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7G4H5_ECTSI4.160e-7055.22Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JVG3_9PHAE5.760e-6955.22ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LRU8_ECTSI1.050e-5750.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LK91_ECTSI8.080e-5548.13Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JIK1_9PHAE2.560e-5145.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FX25_ECTSI2.410e-5044.04Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A6H5L8E6_9PHAE3.260e-4844.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIJ9_9PHAE1.230e-4539.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13032contigE-fasciculatus_F_contig13032:750..3522 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.2
Seed ortholog evalue2.1e-55
Seed eggNOG ortholog2880.D7G4H5
Preferred nameGAL3ST3
KEGG rclassRC00007,RC00231
KEGG koko:K01019,ko:K09676
KEGG ReactionR04017,R05105,R10805
KEGG Pathwayko00565,ko00600,ko01100,map00565,map00600,map01100
KEGG ModuleM00067
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005975,GO:0005976,GO:0005996,GO:0006022,GO:0006029,GO:0006790,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009311,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016782,GO:0017076,GO:0019538,GO:0030166,GO:0030246,GO:0030309,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044425,GO:0050656,GO:0050694,GO:0050698,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681
EggNOG free text desc.galactosylceramide sulfotransferase activity
EggNOG OGs2CM97@1,2QPNT@2759
EC2.8.2.11
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSulfotransferase
Ec32 orthologEc-23_003770.1
Exons4
Model size603
Cds size603
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13032.2298.1prot_E-fasciculatus_F_contig13032.2298.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13032 750..3522 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927809.0016558-CDS-E-fasciculatus_F_contig13032:749..9261622927809.0016558-CDS-E-fasciculatus_F_contig13032:749..926Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 750..926 -
1695995703.5409229-CDS-E-fasciculatus_F_contig13032:749..9261695995703.5409229-CDS-E-fasciculatus_F_contig13032:749..926Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 750..926 -
1622927809.0124333-CDS-E-fasciculatus_F_contig13032:1782..19411622927809.0124333-CDS-E-fasciculatus_F_contig13032:1782..1941Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 1783..1941 -
1695995703.5524611-CDS-E-fasciculatus_F_contig13032:1782..19411695995703.5524611-CDS-E-fasciculatus_F_contig13032:1782..1941Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 1783..1941 -
1622927809.0232015-CDS-E-fasciculatus_F_contig13032:2581..27851622927809.0232015-CDS-E-fasciculatus_F_contig13032:2581..2785Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 2582..2785 -
1695995703.5620637-CDS-E-fasciculatus_F_contig13032:2581..27851695995703.5620637-CDS-E-fasciculatus_F_contig13032:2581..2785Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 2582..2785 -
1622927809.0327132-CDS-E-fasciculatus_F_contig13032:3459..35221622927809.0327132-CDS-E-fasciculatus_F_contig13032:3459..3522Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 3460..3522 -
1695995703.5786195-CDS-E-fasciculatus_F_contig13032:3459..35221695995703.5786195-CDS-E-fasciculatus_F_contig13032:3459..3522Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13032 3460..3522 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13032.2298.1

>prot_E-fasciculatus_F_contig13032.2298.1 ID=prot_E-fasciculatus_F_contig13032.2298.1|Name=mRNA_E-fasciculatus_F_contig13032.2298.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=201bp
QLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAFGSFEGRWAEAR
AMYEKIMQEGERINYITVVRDPRSHFLSYYYYYVQPEVQQLSVQHFFGSN
RKDPQFQYQRRRLTNPLCAEFGIHNGEELAHFIETELPDFRLVLLTEEFD
EGLMMMRRLLGWEMIDMTYSRMMETKAGGERWDGKELKTVPHWDDLLPWV
R
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mRNA from alignment at E-fasciculatus_F_contig13032:750..3522-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13032.2298.1 ID=mRNA_E-fasciculatus_F_contig13032.2298.1|Name=mRNA_E-fasciculatus_F_contig13032.2298.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2773bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13032:750..3522- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTTGCCTCGTTTGGAGGTAACCATGTGTCGGCAATCCCGCTCACCGA AGCAGTGCAACAGGTGTGTGTGCAAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGATAAGAGCCAACAAGTGTTGCGATGATGGGCTGT TTTTGGGCGCAAAGACGCACATTTTGTTGTTCTGGGAGAGATGGGGGGGG GCTACTTTAAGGTCGATTTCCCGGTGCCCCGGTTGACGCCTTGGTGGATG ATTTCATCTTAAGGTGAAGGAATGCGCATGAATGCATGTGAGGTATTGAT TGCTCTTCGCCTCGACGACAGCCGCGAGAGATTGTTGTTGCGATTCTCGT CGTGGGGGCAGGTGGAGAAGAACGGAGAAGGCGCGTAGACGTCCTTCCAC CGTTACTATGTACAACCACTTTTTGGAGATGTGACATGCTGAGTTTGGAT ATCTTGCGTTCTTTTTTTATGGAGTGCGATGAAAGGACGCGAGAGACGTG CTTTTTTTTTTATGAAGTATACTTAGGAGCGAGATAGACGGTTGGTCAGT CGGTGTGCGTCGTCCTCTTGTCGACAACCGTTGCGTCCATGCACAATGCA TGATGCTCAACTGGTTGAATCTTCCCAGCACCCCCAACTCAGCAGTCCTA CGTACGGCATGTATACGTACCTCAAATCGCCACCTAAACAAACACCTGGC TGGCTGGCCTGCTTGACTTGACCTGACCCCCCAACAGATCGAGGAGAGTG GCGAGCGCGTGGATGTCATGCACTACCACTACACCGCTTTCGGCTCCTTC GAAGGGAGGTGGGCGGAGGCTAGGGCCATGTACGAGAAGATCATGCAGGA GGGGGAGAGAATAAACTACATCACGGTGGTGCGGGATCCGAGGTCGCACT TCCTCAGCTACTACTACTACTACGTGCAGCCGGAAGTGCAGGTGGGTCGT TGCTTGCGCGTGTGTCTTAAATGTCTTTATGTTCAGTATCGACCGCGCTA ACCGGCTGGCCAATGAAAAAACGTCACTCACTGCGGTTGAAAACTGAAAA CAAAACACCAAGTTATCCTAAAGGCCACGATCTGGGACCCTGTGACAGAG CGTCGTGGGGGAGTCTACGCTATTCTCCGGATTTTTGTACTGACAGGTAC CGCGCGCGTGTGTGTGTGTGTGTGTGTATTGTTGGCATCGGCACCACTCC CCCCCTCCGATTAACCTTTTAACCCGCTGTTGGCTTATCCGGCGCTGTTG ACGACGGACTTGACTTGCTTCCCCCTACCGGTCTTGTTTGGGTCAGAAAG GCCAGTCATCTTCTCAGCTCTGGCGCAAGGCCTCGGTCGGAAGTGGCACT GCCCGTACCCCCCCCCCCTCGTTACGCGATTTTCGCAAGGTCTTGTTTGT TGCTTCTTGTAAGCAGCTGTCGCTTCAGCTCTGTTTTCGGGGGCAATCAA AATCCCCCCCCCGAGGTCTATTGTCTAACGACCACAGCATGCACGACTAT TAGTACACCCCCCCTCTCGATTTCCAACGAGCCCCCCACCCTCGTACGCG TGTTTCGCGATATCTTGTTGGGTGTCGTGAGCAGTTGTCAGTGCAGCACT TCTTCGGGAGCAATCGAAAAGACCCCCAGTTTCAGTACCAACGTCGGAGG TTAACGAACCCGCTCTGCGCGGAGTTCGGCATCCACAACGGTGAAGAGCT GGCCCACTTTATCGAGACGGAGCTGCCAGACTTCCGCCTGGTGAGAGAGA GAAAGGACAAGGGGGGAAGAGAGAGAGGGGGGGGGAGGGGGATGAGAGAG GCAGAGAGAGAAAGGAATGAGGGAGAGAGAGAGGGAGAGGGATGAAGAGA GAGAAAGAGAGGAATGAGGGAGAGAGAGAGGGGGAGGAATGAAGGATGAG GGGTACAGAAGGAAAGTCCTCAAGGGGGGCAACGGCGTTTTCCGGGGGGT GCACTCGAGCGACAGCAGTAGTCTGTACCAGGAACAGCAACAGTAACAGC AGCGGCAACATCGATGAGTTTGAGGTCATTCGCCGAACACACGAAACATG TTTTGGGGCCGACGTCTGTATGGCCGCGATTTGTCTGATGACGATGTCAG TCGTTGAATCGTGACGCCAACGCTCAAGTCGGAAGCTCACCAATCCCCCG TAGCTCGGTATGCAAGTAGCCGTCACAGCGGCGACAACAAAATAAGGTTC GCCAAGCTCCCGAAAGGGGGAAAAAGCTTCTTGGTGTACATTTATACAAG AGCAAAAAAACTGTCGGACGGCAAGACACCAGTCACTGACTCACCGATGA TGCCGGCGTCGTTCAAGCCGGAGCTCACCATTCCCCCGCGTAACCTTGGC GTGGAAATTAATAGTGTAACCCTAACATGAAGGGTTCTAGGTTAATCTGT CGTTGGTCTCTATTGACCGCGGACCCTTCGGATATATTTTTGTACACCTT TTTGTTCGGGGTAAGTTAGTCTGTGACGACGGGAATCGACCTCGTCAAGT GTTAGACTAGTACGGACAGAAGAAGGTACGCTGGATAGAGAGATCGGAAC GGTTTTTAACGCAGAGACAACACATCCAACACAACATTTCCTTCAGGTGC TGCTGACGGAGGAGTTTGACGAGGGCTTGATGATGATGCGGCGGTTGCTG GGGTGGGAGATGATCGACATGACCTACTCCCGCATGATGGAGACGAAGGC TGGGGGCGAGCGGTGGGACGGCAAGGAACTCAAGACCGTTCCCCACTGGG ACGACTTGCTGCCCTGGGTGAGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13032:750..3522-

>mRNA_E-fasciculatus_F_contig13032.2298.1 ID=mRNA_E-fasciculatus_F_contig13032.2298.1|Name=mRNA_E-fasciculatus_F_contig13032.2298.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1206bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13032:750..3522- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTTGCCTCGTTTGGAGGTAACCATGTGTCGGCAATCCCGCTCACCGA
AGCAGTGCAACAGCAGCTTGCCTCGTTTGGAGGTAACCATGTGTCGGCAA
TCCCGCTCACCGAAGCAGTGCAACAGATCGAGGAGAGTGGCGAGCGCGTG
GATGTCATGCACTACCACTACACCGCTTTCGGCTCCTTCGAAGGGAGGTG
GGCGGAGGCTAGGGCCATGTACGAGAAGATCATGCAGGAGGGGGAGAGAA
TAAACTACATCACGGTGGTGCGGGATCCGAGGTCGCACTTCCTCAGCTAC
TACTACTACTACGTGCAGCCGGAAGTGCAGATCGAGGAGAGTGGCGAGCG
CGTGGATGTCATGCACTACCACTACACCGCTTTCGGCTCCTTCGAAGGGA
GGTGGGCGGAGGCTAGGGCCATGTACGAGAAGATCATGCAGGAGGGGGAG
AGAATAAACTACATCACGGTGGTGCGGGATCCGAGGTCGCACTTCCTCAG
CTACTACTACTACTACGTGCAGCCGGAAGTGCAGCAGTTGTCAGTGCAGC
ACTTCTTCGGGAGCAATCGAAAAGACCCCCAGTTTCAGTACCAACGTCGG
AGGTTAACGAACCCGCTCTGCGCGGAGTTCGGCATCCACAACGGTGAAGA
GCTGGCCCACTTTATCGAGACGGAGCTGCCAGACTTCCGCCTGCAGTTGT
CAGTGCAGCACTTCTTCGGGAGCAATCGAAAAGACCCCCAGTTTCAGTAC
CAACGTCGGAGGTTAACGAACCCGCTCTGCGCGGAGTTCGGCATCCACAA
CGGTGAAGAGCTGGCCCACTTTATCGAGACGGAGCTGCCAGACTTCCGCC
TGGTGCTGCTGACGGAGGAGTTTGACGAGGGCTTGATGATGATGCGGCGG
TTGCTGGGGTGGGAGATGATCGACATGACCTACTCCCGCATGATGGAGAC
GAAGGCTGGGGGCGAGCGGTGGGACGGCAAGGAACTCAAGACCGTTCCCC
ACTGGGACGACTTGCTGCCCTGGGTGAGGGTGCTGCTGACGGAGGAGTTT
GACGAGGGCTTGATGATGATGCGGCGGTTGCTGGGGTGGGAGATGATCGA
CATGACCTACTCCCGCATGATGGAGACGAAGGCTGGGGGCGAGCGGTGGG
ACGGCAAGGAACTCAAGACCGTTCCCCACTGGGACGACTTGCTGCCCTGG
GTGAGG
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