mRNA_E-fasciculatus_F_contig13012.2289.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13012.2289.1
Unique NamemRNA_E-fasciculatus_F_contig13012.2289.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 704 bits (1817), Expect = 5.510e-250
Identity = 342/366 (93.44%), Postives = 356/366 (97.27%), Query Frame = 1
Query:   49 AATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLGSPTPTP 1146
            AATYE SPDG+PMTL AALE AGAGDTISLGDGIYREPLVTM AG+EG+PLVIEGGRDAV+NY+TGD++IMWSQKVVDIRHSW+TLRGFTIDGQ+DD DHE+SFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTN VII+NDIEDCGIYDYRY FDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYN+CEDQRD ESGCYDSRGNENTFRYNTAENC GGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVIC+NSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLG+PT TP
Sbjct:   78 AATYEVSPDGDPMTLAAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLRGFTIDGQIDDADHEDSFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICENSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLGTPTLTP 443          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 598 bits (1542), Expect = 7.000e-211
Identity = 302/377 (80.11%), Postives = 329/377 (87.27%), Query Frame = 1
Query:   10 RLATAALAL--TAASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLGSP 1134
            RLATAALA   T  +AA YE SPDGNPMTLTAALE AGAGD +SL DG YREP+VTMNAG+EG+PLVI GGR A+INYF+GDR++MWSQKVVDIRHS++TL GFTIDGQLDD D EES+VDKCIFVEGQAAP  + + G+ VE+ALIGTVID +KIQNCGMECIRMRNFVTNAVI NNDIE+CGIYD+R++FDGK+GEAIYIGTSSNQW DG   RVTNGPDG NYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRD ESGCYDSRGNENTFRYNTA  C G GIRLGGH IDG  YGVDNHVYGN F ET  GSIK+R +PQGVICDNSC +G+C VSEEGD EEIE SWDQ CPSS PSVPFIDDL +P
Sbjct:   17 RLATAALAALATGTNAAMYEVSPDGNPMTLTAALEVAGAGDIVSLADGTYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTLEGFTIDGQLDDEDVEESYVDKCIFVEGQAAPTMLTHQGQEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCANGECGVSEEGD-EEIEGSWDQGCPSSFPSVPFIDDLETP 392          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D8LJ29_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ29_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 1.660e-139
Identity = 201/248 (81.05%), Postives = 215/248 (86.69%), Query Frame = 1
Query:  412 YDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDL---GSPTPTP 1146
            + G  VE+ALIGTVID +KIQNCGMECIRMRNFVTNAVI NNDIE+CGIYD+R++FDGK+GEAIYIGTSSNQW DG   RVTNGPDG NYNLVTGN+LVPRGNECVDIKEGATMNVVEYNECEDQRD ESGCYDSRGNENTFRYNTA  C G GIRLGGH IDG  YGVDNHVYGN F ET  GSIK+R +PQGVICDNSC DG+C VSEEGDDEEIE SWDQ CP+S PSVPFIDDL    +P PTP
Sbjct:    4 HQGLEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNELVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAIQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCADGECGVSEEGDDEEIEGSWDQGCPASFPSVPFIDDLETPAAPAPTP 251          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 1.980e-103
Identity = 162/327 (49.54%), Postives = 214/327 (65.44%), Query Frame = 1
Query:   43 ASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDG 1023
            A A T++ASPDG P ++ +AL  AGAGDT+ L DG Y E +VT+  G  G+PL+I GGRDA++N   GD       KVV ++HSW+TL GF++DG++ D D  ES+VDKC+FVEG +   D   +G          V+  + +QNCG EC+R+++F+  AVI +N I+DCG+ D+ Y   GK GE IY+GTSS QW+DG        PD CN N +TGN + P GNECVDIKEG+T  +VE N C  Q DE+SGC+ SRG+ N FRYNTA +C G G+R+GG E+DG  YG DN +Y NSF     G +     PQG +C NSC+ G
Sbjct:   11 ADARTFDASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRDALVN--AGDDG-----KVVYVQHSWVTLEGFSVDGKISDDDEAESYVDKCVFVEGTSTSGDERLEG---------FVMQDVYVQNCGDECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSDG--------PDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGG 313          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 4.930e-92
Identity = 160/338 (47.34%), Postives = 214/338 (63.31%), Query Frame = 1
Query:   43 ASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEE-SFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDD 1053
            A A TY+AS DG+   L  A++ A AGDT++L DG Y   LV++  G  GSP+ + GG  A+I      R+++       I HS+ITL+GFT++G++   D +E S+V+KC++VEG          G      L G V++ M +QNCG EC+R+++ V NA ++ N I +CG++DY +    K GE +YIGTSS QW        TNG D CN NLV+GN++   GNECVDIKEGA+ NV+E N C +Q D ESGCYDSRG+ NTFRYN   +C G G+RLGG E+DG  YGV N VYGN F   G+G++K     QG IC N+CEDG C +  E DD
Sbjct:   37 ARAVTYDASADGDGFDLYEAMDLAQAGDTVNLQDGTYDSALVSVRDGEFGSPITVSGGPGAIIKGSYSSRSVL-------ITHSFITLKGFTVEGKIGTSDTDEASWVNKCVYVEGP---------GSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQW--------TNGEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGSCSLVGEDDD 350          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 6.820e-89
Identity = 153/337 (45.40%), Postives = 211/337 (62.61%), Query Frame = 1
Query:   49 AATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEE-SFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDE 1056
            A TY  S DG+ + L  A++ A AGDT++L +G Y   LV++  G  GSP+ + GG  A+I   +  R++        I HS+ITL+GF+++G++   D ++ S+V+KC++VEG          G      L G V++ M +QNCG EC+R+++ V NA +  N I +CG++DY +  + K GE +YIGTSS QW        TNG D CN N+V+ N +   GNECVDIKEG++ NV+E N C DQ D ESGCYDSRG+ NTFRYN    C G G+RLGG E+DG  YGV+N VYGN F   G G++K     QG IC N+CE+G C ++  GDDE
Sbjct:   39 AVTYNVSADGDGIDLYEAMDLAEAGDTVNLQNGTYDSALVSIRDGEFGSPITVAGGPGAIIKGSSSSRSVF-------ITHSFITLKGFSVEGKIGSNDTDQASWVNKCVYVEGP---------GANSSAVLDGFVMEDMVVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQW--------TNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGSCSLT--GDDE 349          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: A0A6H5KG59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG59_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 1.740e-85
Identity = 133/146 (91.10%), Postives = 141/146 (96.58%), Query Frame = 1
Query:   46 SAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCG 483
            SAATYE SPDG+PMTLTAALE AGAGDTISLGDGIYREPLVTMNAG+EG+PLVIEGGRDAVINY+TGD++IMWSQKVVDIRHSWITLRGFT+D Q+DD D EESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCG
Sbjct:   62 SAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRDAVINYYTGDKSIMWSQKVVDIRHSWITLRGFTVDCQIDDADDEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCG 207          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 8.940e-80
Identity = 147/344 (42.73%), Postives = 204/344 (59.30%), Query Frame = 1
Query:   55 TYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQEC 1086
            TY+ + DG+   L  A++ A AGDT+SL DG Y + L T+  G  G+P+ + GG  A+I           + + V + HS+I L+GFT++GQ+     E+S+V  CI+V+G          G    T L G V++ M +QNCG EC+R+++ VTNA I +N I +CGI+DY +      G+ + IGTSS++W DG +       D C  NLV GN +    NECVD+KEGA  NV+E N C +Q D  SGCY+SRGN+N FR N   +C G G+RLGG E+DG  YGV N VY N F + G G++K   D QG IC N+C   DC +  +  D+ I D+WD  C
Sbjct:    2 TYDVTVDGDGFGLAEAMDLAEAGDTVSLQDGTYEQALETVRDGESGNPITVVGGPGAIIKAQNS------ASRSVFVGHSFIELKGFTVEGQIGTEVTEDSYVLNCIYVQGP---------GSDSSTFLDGFVMEEMAVQNCGGECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEE-------DVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIGDYLDDTI-DTWDHAC 322          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC)

HSP 1 Score: 248 bits (633), Expect = 1.060e-72
Identity = 140/316 (44.30%), Postives = 187/316 (59.18%), Query Frame = 1
Query:   88 TLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDV 1035
            ++ A L+ A  GDTI LGDG Y + L ++  G     + ++G R AV+           S +VV+I HS+ITL GFT+ G+       E + DKC+F+ G A P  +  +G   +++L G V+  M+IQ+CG EC+R+R+F TN  I  N IE CG  D+      K GEAIYIGTSSNQW DG + R  +GPD   Y  V  N +  +GNECV++KEGA+  +VEYN C DQ+D  S    SR ++ TFRYN   +C G GIR+GGH I   TYG +N VYGN F +T   S+K       V C+NSC DG C V
Sbjct:   26 SIQAHLDKARPGDTIVLGDGEYEQDLKSVTHGTPDQRITVKGSRRAVVRGAD-------SSRVVEINHSYITLEGFTVSGKRGG----EEYADKCVFILGTAKPRIIRENGGEYQSSLDGVVVKGMQIQDCGGECLRVRSFATNVEIYGNRIEGCGRDDFHLGGSSKNGEAIYIGTSSNQWHDGKNSR--DGPDYTKYVWVHDNTIDSQGNECVEVKEGASDVLVEYNVCTDQQDSNSAGMGSRTDDVTFRYNDISDCLGAGIRIGGHTIGDKTYGENNEVYGNVFHDTEYSSVKVETGKNHVFCENSCGDGSCTV 328          
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC)

HSP 1 Score: 248 bits (634), Expect = 1.830e-72
Identity = 132/304 (43.42%), Postives = 188/304 (61.84%), Query Frame = 1
Query:  103 LEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSC 1014
            L+ A  GDT+ L +G Y + + T+ +G     + IEG + AV+    G  +     ++V++ HS+ TLRGFT+ G+ +  +    +VDKCIFV G ++PE     G   E+++ G +I+ M++++CG ECIR+R+FVT+A +  N IE CG +DY +   GK GEAIY+GTSSNQW DG + +  +GPD   Y  +  N +  + NECVD+KEG+T  +VEYN C +Q D  S  +DSR ++ TFRYN   NC G GIR+GGH+IDG TYG +N  YGN  R     +IK     Q V C N C
Sbjct:   58 LDKARPGDTLRLAEGKYAQDIQTVRSG-----ITIEGSKKAVV---MGSGH---EHRIVEVNHSYTTLRGFTVSGKRNSGNDPSDYVDKCIFVMGISSPEIERTSGIEYESSITGVIIEDMEVEDCGGECIRLRSFVTHAEVTGNRIERCGRHDYLFDGAGKNGEAIYVGTSSNQWNDGKNSK--SGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDC 348          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ42_ECTSI5.510e-25093.44FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K1D2_9PHAE7.000e-21180.11Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D8LJ29_ECTSI1.660e-13981.05FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KT05_9PHAE1.980e-10349.54Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
D7FXR8_ECTSI4.930e-9247.34FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI6.820e-8945.40FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG59_9PHAE1.740e-8591.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZD2_ECTSI8.940e-8042.73FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
B5LWC7_9PHYC1.060e-7244.30Putative nosD copper-binding protein n=1 Tax=Feldm... [more]
Q6XM06_9PHYC1.830e-7243.42FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13012contigE-fasciculatus_F_contig13012:2..3792 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score237.3
Seed ortholog evalue1.3e-59
Seed eggNOG ortholog1121935.AQXX01000136_gene4114
EggNOG free text desc.Parallel beta-helix repeats
EggNOG OGs1NHJ7@1224,1SHNB@1236,COG3420@1,COG3420@2
COG Functional cat.P
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons7
Model size1219
Cds size1218
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927807.1232443-CDS-E-fasciculatus_F_contig13012:1..1731622927807.1232443-CDS-E-fasciculatus_F_contig13012:1..173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 2..173 -
1695995703.152109-CDS-E-fasciculatus_F_contig13012:1..1731695995703.152109-CDS-E-fasciculatus_F_contig13012:1..173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 2..173 -
1622927807.135579-CDS-E-fasciculatus_F_contig13012:396..5151622927807.135579-CDS-E-fasciculatus_F_contig13012:396..515Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 397..515 -
1695995703.1619012-CDS-E-fasciculatus_F_contig13012:396..5151695995703.1619012-CDS-E-fasciculatus_F_contig13012:396..515Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 397..515 -
1622927807.1471648-CDS-E-fasciculatus_F_contig13012:977..10651622927807.1471648-CDS-E-fasciculatus_F_contig13012:977..1065Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 978..1065 -
1695995703.1705196-CDS-E-fasciculatus_F_contig13012:977..10651695995703.1705196-CDS-E-fasciculatus_F_contig13012:977..1065Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 978..1065 -
1622927807.1567175-CDS-E-fasciculatus_F_contig13012:1479..16321622927807.1567175-CDS-E-fasciculatus_F_contig13012:1479..1632Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 1480..1632 -
1695995703.185759-CDS-E-fasciculatus_F_contig13012:1479..16321695995703.185759-CDS-E-fasciculatus_F_contig13012:1479..1632Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 1480..1632 -
1622927807.168941-CDS-E-fasciculatus_F_contig13012:2034..22381622927807.168941-CDS-E-fasciculatus_F_contig13012:2034..2238Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 2035..2238 -
1695995703.1966174-CDS-E-fasciculatus_F_contig13012:2034..22381695995703.1966174-CDS-E-fasciculatus_F_contig13012:2034..2238Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 2035..2238 -
1622927807.185153-CDS-E-fasciculatus_F_contig13012:2449..26221622927807.185153-CDS-E-fasciculatus_F_contig13012:2449..2622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 2450..2622 -
1695995703.2044861-CDS-E-fasciculatus_F_contig13012:2449..26221695995703.2044861-CDS-E-fasciculatus_F_contig13012:2449..2622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 2450..2622 -
1622927807.1951473-CDS-E-fasciculatus_F_contig13012:3483..37921622927807.1951473-CDS-E-fasciculatus_F_contig13012:3483..3792Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 3484..3792 -
1695995703.2124786-CDS-E-fasciculatus_F_contig13012:3483..37921695995703.2124786-CDS-E-fasciculatus_F_contig13012:3483..3792Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13012 3484..3792 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13012.2289.1prot_E-fasciculatus_F_contig13012.2289.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13012 2..3792 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13012.2289.1

>prot_E-fasciculatus_F_contig13012.2289.1 ID=prot_E-fasciculatus_F_contig13012.2289.1|Name=mRNA_E-fasciculatus_F_contig13012.2289.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=406bp
TTARLATAALALTAASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGI
YREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWI
TLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGT
VIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEA
IYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGAT
MNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEID
GITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGD
DEEIEDSWDQECPSSLPSVPFIDDLGSPTPTPPTPTPPTPTPTPPTPTPP
TPTPPT
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mRNA from alignment at E-fasciculatus_F_contig13012:2..3792-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13012.2289.1 ID=mRNA_E-fasciculatus_F_contig13012.2289.1|Name=mRNA_E-fasciculatus_F_contig13012.2289.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3791bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13012:2..3792- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACTACCGCGCGCCTTGCCACGGCAGCCCTCGCCCTCACCGCTGCTAGCGC CGCCACCTACGAGGCGTCCCCTGATGGCAATCCCATGACGCTCACCGCAG CGCTAGAGGCGGCCGGTGCTGGCGACACTATATCTTTGGGGGACGGGATC TACCGCGAGCCGCTCGTGACGATGAACGCTGGTATGGAGGGCAGCCCTCT CGTGATCGAGGGTGGCAGAGACGCGGTCATCAATTACTTCACCGGCGACA GGAATATTATGTGGTCCCAGAAGGTCGTCGACATCCGCCACTCGTGGATC ACTCTGCGGGTGAGAGGCGCAGATATAGAGTAGAGAGGATTAGAGACAAG ACGTGAGGGTGAGCGTACGCGTCGTCGACCGCACGATGTTCAGCGCACCT GTTGCCAGAACGTATTTCTTGGTTGGGTCGTAGCCTGGCCGCTGCCGTTT CAGTTCATTCACGGGGATCGGCTGGTTCACCGGTAGGAGGTGTTCAAGAA GAAAGACCCGTGCCCCCTTGGGTGAGACAACGAGCCCGCGGGTACCGTAT TGGAATGTTCTGGAGGTTTTAGTGGGCAAGCGCTACTGAAAGGGTTTGAT GATCATCCACCTGAACAGGTGCTCGTCCCAACGACGTCAGTGGCTTCTCA GTAATCGCTCGGGGTTGGTTTCATGCATGGTTTTGTTATGTTGTTAGCAA ACGCCAACAGCAATGAACCCGCCGCCACAAAATGATTACCTCCCAGCAAA CTTGGAACTCCTTTAACTTGTTGGAGAGAGCACACACTGTTTTTTTGTTG TATTTTTTCTCTTTGGGGGGGGGGGAGAAACCATATTTGTTAGGGTGGAG TGCATGACGATAGTGGCACCAGCATAGGACCGTGCAGATGCCTGTCGCAT GCGTACCGAACACGACTATATTTGTACGACCACTTTTTTGTCGCATTGTT TTCACCATGCCGATACGTAGGTGTCTTGTGGTTTTCGACCTTAGGCAAAT ACCAGTTCAAAGCGTTCATGATGAACGAAGCAGCTGTTTTTCCCGCTTTG CGTCGGAGCAACGGGCAGAAAGTGTGTCAGTCTACACGCACTTTTCGAAA AACAAGCAAAGAGCTACGTAGTCTAACATCACGTTCGGCGCGTATCTTGT TGTCCCGTCCAACTGCGTAGGGTTTCACCATCGACGGTCAGCTGGACGAC ATCGATCACGAAGAATCGTTCGTGGACAAGTGCATCTTCGTGGAGGGTCA GGCCGCGCCCGAGGACGTCGAATACGACGGTCGCACGGTCGAGACCGCCT TGATTGGCACGGTGATCGATAGCATGAAAATCCAGAACTGCGGGTGCGTG CATGCGTGCGTATTGCACTCAACAAGAATACTCACCAGTGCCTTTCAAAA CATGACCGGTGCTCGTGGGTAGTGAAGCCTTCGTTGTTCTGTCTTCTTCT TCCTCTTCTTGTCCTCCTTGTAGTACTGTGGCAACTGTGTGTGGGCGTCT CTTGTATGATTTGCACACACATAAGCAGCATACCATAACCACACCATCTT GCAGGATGGAGTGCATCCGCATGAGGAACTTCGTCACGAATGCGGTGATC ATTAACAACGACATCGAGGACTGCGGCATCTACGACTACCGGTACAGGTT CGACGGAAAGGTCGGCGAAGCAATCTACATCGGAACGTCCAGCAACCAGT GGGCCGACGGTGCAGATGGGAGGGTGACGAACGGCCCTGACGGATGCAAC TACAACCTGTGAGTAATGTGCATGCGAGTGGCTCTCGTTGAGGTGTTCTT TTTCTTGATTTTTTCGGTTTCATCCTTGTCCTGTGTACACAAACCAGTAG ATGTTTCTTTCAAGTGTCTGTCCTCGTGGTATGAAATCGTGAGACGCGCC TGGTGGGCGTCGTTGTGATAGCCCTTTGAGAACCACTCATCATATTGATT CGAAGGTAACGATGGGGTCAGCATGTGTGGACGACGATGACCACCACGGA ACACGTCCACGCCTGGCCATTCCTCACGGCAGGAAGGAACGGCTTCGCTT TGAAAAAGGCCGGGGTGGGCATATACATGCAGCCAGCGAGTGACTAGACA AACCCGGGCTAAGAAGAAAGTATTGACTTGACAACGACGAAAACATGTCT TTACCGACAGGGTGACCGGGAACAAGCTCGTGCCTCGCGGTAACGAGTGC GTGGACATCAAGGAGGGCGCAACCATGAACGTCGTCGAGTACAACGAATG CGAGGACCAGCGGGACGAGGAGTCAGGGTGCTATGACTCCAGGGGAAACG AGAACACCTTCAGGTGCTTTCGTTGTACAACGCTAGGGCACCCGCATGTG TTGCGACGTTCGGTCCTGTGTTAGTCAGTGCCAACGTTTTAATGGCTCGT TGGATTACTGTCGGGACTCGGAAGAGCCGGGTGGCAACGCCCTTCTCTAC CGTATAGGAAAGCACGGGCGGAGAGCACATAAAAGAGGATCGTTTCTGTT GACTACAGAGAGAGAGAGAAAAACATTTGTGGCACGCAGTTCGCTGATTG GCCAACGCCCCCTGCGGCGGAATATAAAAAACGGCAAAAAATTAGGGCAC GGTCGAAGATCCTTGGACGACGGGTGACGTCATCCACACGACAACCAACG GCCGATAAAAACACTCCTTTATCCAATCAACAACCAACGGCTGCTTCCAC CGCTCCCGTTTCTGAATTTGGTGCCAGGTACAACACGGCCGAGAATTGCG ATGGCGGTGGAATCCGTCTTGGTGGTCACGAAATCGACGGCATCACTTAC GGAGTCGACAACCACGTGAGTGACAGCACCTCTCTGTCGCGTTGAACTTG CGGCACCCCCCGCGCACACACCCGCGACCCGCAGCGGGAGATATGTTCGG ACTCCAGTGAATTCTTGCAACTCCAACGGTTCTCATCTTTGTCTACTCCT TCTACGCGAACGAAGTCTTTCTCTTGAAGGCGAGGGAAAATATGCGGGGG TTGGTCTGTGCGTGCGTGTGCCTGTTGTGCTGCTGTCTAAGGAGGATCAT CATCATCACTATCATCATCATCTGCTGCTGCTGTCGCTGCTACTGCTGGT GCTGGTGCTGGTGCTCATCCAACAACAACGCAAATAGTTTCACGCAGGAT AAGTGTTCATAGGAACGGTAGAATCCGCGTTCCCCGGCTCCTCATCCAAT TTCAAAATCCAGCGGTTTCTAGTCACTCACACCACCCGAGTTTCTCTACC CCGATTAAACAAACACTATCCAAACAGGTCTACGGGAACTCGTTCAGAGA GACCGGTGACGGATCGATCAAGGCGAGGAGAGACCCACAGGGGGTCATCT GCGACAACTCGTGCGAGGACGGTGACTGTGATGTCAGCGAGGAAGGGTGC GTACGGCAAAAGGAAAACAAGGTTGCGCGAGAAAGCCCATCGTAGGACGG GAGGCGTCGGCACGTCAATCTCATTCCGTAGACTAGCCCGCACATACGTA TGGAAGCACGTTGTGAACAAGAGAGTGGCATTTTGTCTCCGATGTACTGT CTGTTAAGGATCTTTGGCCGTCCTACAAGACCCTCCCTCCTCTCCCTTTC CCCTCTTTACTCGTTTCAGGGATGACGAGGAGATCGAAGACTCTTGGGAC CAGGAGTGCCCGTCTAGCTTACCTTCCGTCCCTTTCATCGACGACTTGGG CTCGCCGACCCCGACTCCTCCCACCCCCACCCCCCCCACCCCCACCCCCA CTCCTCCTACCCCTACTCCACCCACCCCCACTCCACCTACC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13012:2..3792-

>mRNA_E-fasciculatus_F_contig13012.2289.1 ID=mRNA_E-fasciculatus_F_contig13012.2289.1|Name=mRNA_E-fasciculatus_F_contig13012.2289.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2436bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13012:2..3792- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACTACCGCGCGCCTTGCCACGGCAGCCCTCGCCCTCACCGCTGCTAGCGC
CGCCACCTACGAGGCGTCCCCTGATGGCAATCCCATGACGCTCACCGCAG
CGCTAGAGGCGGCCGGTGCTGGCGACACTATATCTTTGGGGGACGGGATC
TACCGCGAGCCGCTCGTGACGATGAACGCTGGTATGGAGGGCAGCCCTCT
CGTGATCGAGGGTGGCAGAGACGCGGTCATCAATTACTTCACCGGCGACA
GGAATATTATGTGGTCCCAGAAGGTCGTCGACATCCGCCACTCGTGGATC
ACTCTGCGGACTACCGCGCGCCTTGCCACGGCAGCCCTCGCCCTCACCGC
TGCTAGCGCCGCCACCTACGAGGCGTCCCCTGATGGCAATCCCATGACGC
TCACCGCAGCGCTAGAGGCGGCCGGTGCTGGCGACACTATATCTTTGGGG
GACGGGATCTACCGCGAGCCGCTCGTGACGATGAACGCTGGTATGGAGGG
CAGCCCTCTCGTGATCGAGGGTGGCAGAGACGCGGTCATCAATTACTTCA
CCGGCGACAGGAATATTATGTGGTCCCAGAAGGTCGTCGACATCCGCCAC
TCGTGGATCACTCTGCGGGGTTTCACCATCGACGGTCAGCTGGACGACAT
CGATCACGAAGAATCGTTCGTGGACAAGTGCATCTTCGTGGAGGGTCAGG
CCGCGCCCGAGGACGTCGAATACGACGGTCGCACGGTCGAGACCGCCTTG
ATTGGCACGGTGATCGATAGCATGAAAATCCAGAACTGCGGGGTTTCACC
ATCGACGGTCAGCTGGACGACATCGATCACGAAGAATCGTTCGTGGACAA
GTGCATCTTCGTGGAGGGTCAGGCCGCGCCCGAGGACGTCGAATACGACG
GTCGCACGGTCGAGACCGCCTTGATTGGCACGGTGATCGATAGCATGAAA
ATCCAGAACTGCGGGATGGAGTGCATCCGCATGAGGAACTTCGTCACGAA
TGCGGTGATCATTAACAACGACATCGAGGACTGCGGCATCTACGACTACC
GGTACAGGTTCGACGGAAAGGTCGGCGAAGCAATCTACATCGGAACGTCC
AGCAACCAGTGGGCCGACGGTGCAGATGGGAGGGTGACGAACGGCCCTGA
CGGATGCAACTACAACCTGATGGAGTGCATCCGCATGAGGAACTTCGTCA
CGAATGCGGTGATCATTAACAACGACATCGAGGACTGCGGCATCTACGAC
TACCGGTACAGGTTCGACGGAAAGGTCGGCGAAGCAATCTACATCGGAAC
GTCCAGCAACCAGTGGGCCGACGGTGCAGATGGGAGGGTGACGAACGGCC
CTGACGGATGCAACTACAACCTGGTGACCGGGAACAAGCTCGTGCCTCGC
GGTAACGAGTGCGTGGACATCAAGGAGGGCGCAACCATGAACGTCGTCGA
GTACAACGAATGCGAGGACCAGCGGGACGAGGAGTCAGGGTGCTATGACT
CCAGGGGAAACGAGAACACCTTCAGGGTGACCGGGAACAAGCTCGTGCCT
CGCGGTAACGAGTGCGTGGACATCAAGGAGGGCGCAACCATGAACGTCGT
CGAGTACAACGAATGCGAGGACCAGCGGGACGAGGAGTCAGGGTGCTATG
ACTCCAGGGGAAACGAGAACACCTTCAGGTACAACACGGCCGAGAATTGC
GATGGCGGTGGAATCCGTCTTGGTGGTCACGAAATCGACGGCATCACTTA
CGGAGTCGACAACCACGTACAACACGGCCGAGAATTGCGATGGCGGTGGA
ATCCGTCTTGGTGGTCACGAAATCGACGGCATCACTTACGGAGTCGACAA
CCACGTCTACGGGAACTCGTTCAGAGAGACCGGTGACGGATCGATCAAGG
CGAGGAGAGACCCACAGGGGGTCATCTGCGACAACTCGTGCGAGGACGGT
GACTGTGATGTCAGCGAGGAAGGGTCTACGGGAACTCGTTCAGAGAGACC
GGTGACGGATCGATCAAGGCGAGGAGAGACCCACAGGGGGTCATCTGCGA
CAACTCGTGCGAGGACGGTGACTGTGATGTCAGCGAGGAAGGGGATGACG
AGGAGATCGAAGACTCTTGGGACCAGGAGTGCCCGTCTAGCTTACCTTCC
GTCCCTTTCATCGACGACTTGGGCTCGCCGACCCCGACTCCTCCCACCCC
CACCCCCCCCACCCCCACCCCCACTCCTCCTACCCCTACTCCACCCACCC
CCACTCCACCTACCGGATGACGAGGAGATCGAAGACTCTTGGGACCAGGA
GTGCCCGTCTAGCTTACCTTCCGTCCCTTTCATCGACGACTTGGGCTCGC
CGACCCCGACTCCTCCCACCCCCACCCCCCCCACCCCCACCCCCACTCCT
CCTACCCCTACTCCACCCACCCCCACTCCACCTACC
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