mRNA_E-fasciculatus_F_contig13012.2289.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI) HSP 1 Score: 704 bits (1817), Expect = 5.510e-250 Identity = 342/366 (93.44%), Postives = 356/366 (97.27%), Query Frame = 1
Query: 49 AATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLGSPTPTP 1146
AATYE SPDG+PMTL AALE AGAGDTISLGDGIYREPLVTM AG+EG+PLVIEGGRDAV+NY+TGD++IMWSQKVVDIRHSW+TLRGFTIDGQ+DD DHE+SFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTN VII+NDIEDCGIYDYRY FDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYN+CEDQRD ESGCYDSRGNENTFRYNTAENC GGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVIC+NSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLG+PT TP
Sbjct: 78 AATYEVSPDGDPMTLAAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLRGFTIDGQIDDADHEDSFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICENSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLGTPTLTP 443
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE) HSP 1 Score: 598 bits (1542), Expect = 7.000e-211 Identity = 302/377 (80.11%), Postives = 329/377 (87.27%), Query Frame = 1
Query: 10 RLATAALAL--TAASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDLGSP 1134
RLATAALA T +AA YE SPDGNPMTLTAALE AGAGD +SL DG YREP+VTMNAG+EG+PLVI GGR A+INYF+GDR++MWSQKVVDIRHS++TL GFTIDGQLDD D EES+VDKCIFVEGQAAP + + G+ VE+ALIGTVID +KIQNCGMECIRMRNFVTNAVI NNDIE+CGIYD+R++FDGK+GEAIYIGTSSNQW DG RVTNGPDG NYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRD ESGCYDSRGNENTFRYNTA C G GIRLGGH IDG YGVDNHVYGN F ET GSIK+R +PQGVICDNSC +G+C VSEEGD EEIE SWDQ CPSS PSVPFIDDL +P
Sbjct: 17 RLATAALAALATGTNAAMYEVSPDGNPMTLTAALEVAGAGDIVSLADGTYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTLEGFTIDGQLDDEDVEESYVDKCIFVEGQAAPTMLTHQGQEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCANGECGVSEEGD-EEIEGSWDQGCPSSFPSVPFIDDLETP 392
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D8LJ29_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ29_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 1.660e-139 Identity = 201/248 (81.05%), Postives = 215/248 (86.69%), Query Frame = 1
Query: 412 YDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDDL---GSPTPTP 1146
+ G VE+ALIGTVID +KIQNCGMECIRMRNFVTNAVI NNDIE+CGIYD+R++FDGK+GEAIYIGTSSNQW DG RVTNGPDG NYNLVTGN+LVPRGNECVDIKEGATMNVVEYNECEDQRD ESGCYDSRGNENTFRYNTA C G GIRLGGH IDG YGVDNHVYGN F ET GSIK+R +PQGVICDNSC DG+C VSEEGDDEEIE SWDQ CP+S PSVPFIDDL +P PTP
Sbjct: 4 HQGLEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNELVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAIQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCADGECGVSEEGDDEEIEGSWDQGCPASFPSVPFIDDLETPAAPAPTP 251
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE) HSP 1 Score: 318 bits (814), Expect = 1.980e-103 Identity = 162/327 (49.54%), Postives = 214/327 (65.44%), Query Frame = 1
Query: 43 ASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDG 1023
A A T++ASPDG P ++ +AL AGAGDT+ L DG Y E +VT+ G G+PL+I GGRDA++N GD KVV ++HSW+TL GF++DG++ D D ES+VDKC+FVEG + D +G V+ + +QNCG EC+R+++F+ AVI +N I+DCG+ D+ Y GK GE IY+GTSS QW+DG PD CN N +TGN + P GNECVDIKEG+T +VE N C Q DE+SGC+ SRG+ N FRYNTA +C G G+R+GG E+DG YG DN +Y NSF G + PQG +C NSC+ G
Sbjct: 11 ADARTFDASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRDALVN--AGDDG-----KVVYVQHSWVTLEGFSVDGKISDDDEAESYVDKCVFVEGTSTSGDERLEG---------FVMQDVYVQNCGDECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSDG--------PDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGG 313
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI) HSP 1 Score: 296 bits (757), Expect = 4.930e-92 Identity = 160/338 (47.34%), Postives = 214/338 (63.31%), Query Frame = 1
Query: 43 ASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEE-SFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDD 1053
A A TY+AS DG+ L A++ A AGDT++L DG Y LV++ G GSP+ + GG A+I R+++ I HS+ITL+GFT++G++ D +E S+V+KC++VEG G L G V++ M +QNCG EC+R+++ V NA ++ N I +CG++DY + K GE +YIGTSS QW TNG D CN NLV+GN++ GNECVDIKEGA+ NV+E N C +Q D ESGCYDSRG+ NTFRYN +C G G+RLGG E+DG YGV N VYGN F G+G++K QG IC N+CEDG C + E DD
Sbjct: 37 ARAVTYDASADGDGFDLYEAMDLAQAGDTVNLQDGTYDSALVSVRDGEFGSPITVSGGPGAIIKGSYSSRSVL-------ITHSFITLKGFTVEGKIGTSDTDEASWVNKCVYVEGP---------GSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQW--------TNGEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGSCSLVGEDDD 350
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI) HSP 1 Score: 282 bits (722), Expect = 6.820e-89 Identity = 153/337 (45.40%), Postives = 211/337 (62.61%), Query Frame = 1
Query: 49 AATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEE-SFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDE 1056
A TY S DG+ + L A++ A AGDT++L +G Y LV++ G GSP+ + GG A+I + R++ I HS+ITL+GF+++G++ D ++ S+V+KC++VEG G L G V++ M +QNCG EC+R+++ V NA + N I +CG++DY + + K GE +YIGTSS QW TNG D CN N+V+ N + GNECVDIKEG++ NV+E N C DQ D ESGCYDSRG+ NTFRYN C G G+RLGG E+DG YGV+N VYGN F G G++K QG IC N+CE+G C ++ GDDE
Sbjct: 39 AVTYNVSADGDGIDLYEAMDLAEAGDTVNLQNGTYDSALVSIRDGEFGSPITVAGGPGAIIKGSSSSRSVF-------ITHSFITLKGFSVEGKIGSNDTDQASWVNKCVYVEGP---------GANSSAVLDGFVMEDMVVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQW--------TNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGSCSLT--GDDE 349
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: A0A6H5KG59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG59_9PHAE) HSP 1 Score: 268 bits (686), Expect = 1.740e-85 Identity = 133/146 (91.10%), Postives = 141/146 (96.58%), Query Frame = 1
Query: 46 SAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCG 483
SAATYE SPDG+PMTLTAALE AGAGDTISLGDGIYREPLVTMNAG+EG+PLVIEGGRDAVINY+TGD++IMWSQKVVDIRHSWITLRGFT+D Q+DD D EESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCG
Sbjct: 62 SAATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRDAVINYYTGDKSIMWSQKVVDIRHSWITLRGFTVDCQIDDADDEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCG 207
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI) HSP 1 Score: 264 bits (674), Expect = 8.940e-80 Identity = 147/344 (42.73%), Postives = 204/344 (59.30%), Query Frame = 1
Query: 55 TYEASPDGNPMTLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDVSEEGDDEEIEDSWDQEC 1086
TY+ + DG+ L A++ A AGDT+SL DG Y + L T+ G G+P+ + GG A+I + + V + HS+I L+GFT++GQ+ E+S+V CI+V+G G T L G V++ M +QNCG EC+R+++ VTNA I +N I +CGI+DY + G+ + IGTSS++W DG + D C NLV GN + NECVD+KEGA NV+E N C +Q D SGCY+SRGN+N FR N +C G G+RLGG E+DG YGV N VY N F + G G++K D QG IC N+C DC + + D+ I D+WD C
Sbjct: 2 TYDVTVDGDGFGLAEAMDLAEAGDTVSLQDGTYEQALETVRDGESGNPITVVGGPGAIIKAQNS------ASRSVFVGHSFIELKGFTVEGQIGTEVTEDSYVLNCIYVQGP---------GSDSSTFLDGFVMEEMAVQNCGGECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEE-------DVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIGDYLDDTI-DTWDHAC 322
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC) HSP 1 Score: 248 bits (633), Expect = 1.060e-72 Identity = 140/316 (44.30%), Postives = 187/316 (59.18%), Query Frame = 1
Query: 88 TLTAALEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSCEDGDCDV 1035
++ A L+ A GDTI LGDG Y + L ++ G + ++G R AV+ S +VV+I HS+ITL GFT+ G+ E + DKC+F+ G A P + +G +++L G V+ M+IQ+CG EC+R+R+F TN I N IE CG D+ K GEAIYIGTSSNQW DG + R +GPD Y V N + +GNECV++KEGA+ +VEYN C DQ+D S SR ++ TFRYN +C G GIR+GGH I TYG +N VYGN F +T S+K V C+NSC DG C V
Sbjct: 26 SIQAHLDKARPGDTIVLGDGEYEQDLKSVTHGTPDQRITVKGSRRAVVRGAD-------SSRVVEINHSYITLEGFTVSGKRGG----EEYADKCVFILGTAKPRIIRENGGEYQSSLDGVVVKGMQIQDCGGECLRVRSFATNVEIYGNRIEGCGRDDFHLGGSSKNGEAIYIGTSSNQWHDGKNSR--DGPDYTKYVWVHDNTIDSQGNECVEVKEGASDVLVEYNVCTDQQDSNSAGMGSRTDDVTFRYNDISDCLGAGIRIGGHTIGDKTYGENNEVYGNVFHDTEYSSVKVETGKNHVFCENSCGDGSCTV 328
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC) HSP 1 Score: 248 bits (634), Expect = 1.830e-72 Identity = 132/304 (43.42%), Postives = 188/304 (61.84%), Query Frame = 1
Query: 103 LEAAGAGDTISLGDGIYREPLVTMNAGMEGSPLVIEGGRDAVINYFTGDRNIMWSQKVVDIRHSWITLRGFTIDGQLDDIDHEESFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNAVIINNDIEDCGIYDYRYRFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDEESGCYDSRGNENTFRYNTAENCDGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICDNSC 1014
L+ A GDT+ L +G Y + + T+ +G + IEG + AV+ G + ++V++ HS+ TLRGFT+ G+ + + +VDKCIFV G ++PE G E+++ G +I+ M++++CG ECIR+R+FVT+A + N IE CG +DY + GK GEAIY+GTSSNQW DG + + +GPD Y + N + + NECVD+KEG+T +VEYN C +Q D S +DSR ++ TFRYN NC G GIR+GGH+IDG TYG +N YGN R +IK Q V C N C
Sbjct: 58 LDKARPGDTLRLAEGKYAQDIQTVRSG-----ITIEGSKKAVV---MGSGH---EHRIVEVNHSYTTLRGFTVSGKRNSGNDPSDYVDKCIFVMGISSPEIERTSGIEYESSITGVIIEDMEVEDCGGECIRLRSFVTHAEVTGNRIERCGRHDYLFDGAGKNGEAIYVGTSSNQWNDGKNSK--SGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDC 348 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13012.2289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13012.2289.1 >prot_E-fasciculatus_F_contig13012.2289.1 ID=prot_E-fasciculatus_F_contig13012.2289.1|Name=mRNA_E-fasciculatus_F_contig13012.2289.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=406bp TTARLATAALALTAASAATYEASPDGNPMTLTAALEAAGAGDTISLGDGIback to top mRNA from alignment at E-fasciculatus_F_contig13012:2..3792- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13012.2289.1 ID=mRNA_E-fasciculatus_F_contig13012.2289.1|Name=mRNA_E-fasciculatus_F_contig13012.2289.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3791bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13012:2..3792- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13012:2..3792- >mRNA_E-fasciculatus_F_contig13012.2289.1 ID=mRNA_E-fasciculatus_F_contig13012.2289.1|Name=mRNA_E-fasciculatus_F_contig13012.2289.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2436bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13012:2..3792- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |