mRNA_E-fasciculatus_F_contig1300.2282.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1300.2282.1
Unique NamemRNA_E-fasciculatus_F_contig1300.2282.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: D7G6E5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E5_ECTSI)

HSP 1 Score: 491 bits (1265), Expect = 4.120e-169
Identity = 263/297 (88.55%), Postives = 266/297 (89.56%), Query Frame = 1 
Query:    1 MKFTTALVGAGALCAGTDAFIPVAVPASSSRFVSKRSVVAXXXXXXXXXXXXXXXXXXXXXXXXKGGLPQSVSSKITNIFRGGSRKGNSNDXXXXXXXXXGKVPPLGASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE 891
            MKFTTALVGAGALCA TDAF+P AVPASSS FVSKRSVV                         KGGLPQSVSSKITNIFRGGSRKGN   XXXXXXXXXGKVPPLGASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEE+DLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFR+IPTSQRLLYINTIQIFYNCFLSVIAQRE
Sbjct:    1 MKFTTALVGAGALCASTDAFVPAAVPASSSTFVSKRSVVDAAAPAILASRGGDVMMSLGGGGSKKGGLPQSVSSKITNIFRGGSRKGNXXXXXXXXXXXXGKVPPLGASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEEIDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRMIPTSQRLLYINTIQIFYNCFLSVIAQRE 297
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: A0A835Z9Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q4_9STRA)

HSP 1 Score: 298 bits (764), Expect = 2.180e-93
Identity = 157/238 (65.97%), Postives = 184/238 (77.31%), Query Frame = 1 
Query:  193 KGGLPQSVSSKITNIFRGGSRKGNSNDXXXXXXXXXGKVPPLG--ASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE*AT 900
            KGG   S    I N+F G ++ G  N   XXXXXXX K PP G  ++SSA GDG+KKA GL  IWAAY + L  +P+LTK+LTSM GF LGD LAQKFI K E++D  RL ++ASFG LIHG++GHFFY  LDSKIPGTAALTVA KVFIDQ +WNPIFGCMFFGYMG  +G+ PS +  +I+NNLW SVKGSWTVWPVAHAINFR IPTSQRLLYIN++QI YN FLS+++QR  AT
Sbjct:   55 KGGFRSSPGGIIRNVFMGKNKSGGGN-INXXXXXXXXKGPPTGPLSASSASGDGKKKAGGLMAIWAAYNNSLDKRPILTKALTSMIGFGLGDFLAQKFISKSEKIDWERLGRMASFGLLIHGTTGHFFYGMLDSKIPGTAALTVATKVFIDQAIWNPIFGCMFFGYMGFAEGLSPSAVKARIQNNLWASVKGSWTVWPVAHAINFRCIPTSQRLLYINSVQIGYNMFLSILSQRAQAT 291
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: A0A7S2FYX3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYX3_9STRA)

HSP 1 Score: 248 bits (634), Expect = 7.080e-75
Identity = 132/233 (56.65%), Postives = 162/233 (69.53%), Query Frame = 1 
Query:  193 KGGLPQSVSSKITNIFRGGSRKGNSNDXXXXXXXXXGKVPPLGASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE 891
            +GG+ +S+     N   G    GN         XXXG    L A +S  GDG+ K  G G +WAAY + L + P+LTK+LTSM GF LGD+LAQ F++KK E D+ R ++LASFG LIHG++GH+FY  LD  IPGT A+ V  KV IDQVLWNPIFG MFF YMG  +G GP+ ++ K+K +L T V GSWTVWP+AHAINFR IPTSQRLLYINTIQIFYN FLS+I  +E
Sbjct:   28 RGGIRRSIRKSPFNNKGGFGTNGNIGGNGQPPIXXXG---GLNADASG-GDGDAKEDGQG-LWAAYNNKLETNPILTKALTSMIGFTLGDILAQNFVEKKGEYDIMRTIRLASFGFLIHGTTGHWFYGKLDKAIPGTGAMQVFSKVGIDQVLWNPIFGVMFFSYMGFTNGDGPAAVAAKVKRDLMTQVTGSWTVWPIAHAINFRFIPTSQRLLYINTIQIFYNVFLSIIGNKE 255
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: W7U673_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U673_9STRA)

HSP 1 Score: 247 bits (631), Expect = 5.860e-74
Identity = 116/179 (64.80%), Postives = 140/179 (78.21%), Query Frame = 1 
Query:  367 LGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE*ATK 903
            L ++W  Y  LL  QPLLTK+LTS  GF++GDLLAQKFIDK E +DL RLLKLA FG L+HG +GH+FY FLD K+PGT+A+TVA KV IDQ+LWNPIFG MFFG++G  +G    GI  +I+ +LW SVKGSWTVWP+AHAINFR IP SQRLLYIN++QI YN FLS +A R  A +
Sbjct:  101 LQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPE 279
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: A0A7S2XWX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX9_9STRA)

HSP 1 Score: 240 bits (613), Expect = 3.420e-71
Identity = 130/231 (56.28%), Postives = 164/231 (71.00%), Query Frame = 1 
Query:  199 GLPQSVSSKITNIFRGGSRKGNSNDXXXXXXXXXGKVPPLGASSSAEGDGEKKAKG---LGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIA 882
            G+ + +S++  N  +GG+  GN+  XXXXXXXXXG VPP  + +SA  +G     G      +WAAY + L S P+ TK+LTS+ GF+LGD+LAQKF+   E  D  R+ +LASFG L HG  GH+FY FLD+KIPGTA   VA KV IDQ++WNPIFG  F GYMG  +G     + +KIKN+L  +V GSWTVWP+AHAINFR IPTSQRLLYIN+IQ+FYNCFLS +A
Sbjct:   59 GVKRGISTR--NPIKGGNFGGNN--XXXXXXXXXGLVPPRNSEASASSEGGDNNSGSNPFASLWAAYNAALESSPITTKALTSLVGFSLGDILAQKFLSAGEPFDFLRMARLASFGLLFHGPVGHYFYGFLDTKIPGTALSVVASKVAIDQIIWNPIFGTFFLGYMGFAEGKNAGEVGQKIKNDLVKAVTGSWTVWPIAHAINFRFIPTSQRLLYINSIQVFYNCFLSFLA 285
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: F0YKE1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKE1_AURAN)

HSP 1 Score: 229 bits (585), Expect = 7.110e-69
Identity = 109/168 (64.88%), Postives = 129/168 (76.79%), Query Frame = 1 
Query:  376 IWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVI 879
            +WAAY + L   PLL K LTSM GF LGD+LAQ FI+K ++ D+ R ++ +SFG L+HG++ H+FY  LD KIPGT A  VA KV IDQVLWNPIFG MFFGYMG  +G G  G   KIKN+L T V GSWTVWP+AHAINF+ IP SQR+LYINTIQIFYNCFLS+I
Sbjct:    1 VWAAYEAALEKDPLLIKGLTSMIGFFLGDVLAQCFIEKSDKYDIWRTIRFSSFGLLVHGTTSHWFYGKLDGKIPGTGAGAVASKVGIDQVLWNPIFGIMFFGYMGIFEGSGVGGTITKIKNDLLTQVTGSWTVWPIAHAINFKFIPNSQRVLYINTIQIFYNCFLSII 168
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: A0A6T7UAW2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A6T7UAW2_9EUKA)

HSP 1 Score: 228 bits (580), Expect = 2.110e-66
Identity = 126/223 (56.50%), Postives = 148/223 (66.37%), Query Frame = 1 
Query:  223 KITNIFRGGSRKGNSNDXXXXXXXXXGKVPPLGASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE 891
            KI     GGS  G  ND  XXX     K P   A   + GD       L  IW AY S L S PL+ K LTS TGF LGDL+AQ  I K +  D  RL +L+SFG  +HGS+ HFFYNFLD KIPG +A +VA KVFIDQV+WNPIFG MFF Y+ A++G GP  +  K+K  L TSV GSW VWP+AH INFR IP+SQR+LYIN+IQI YNCFLSVI+ R+
Sbjct:   79 KIPGKPTGGSGFGCGNDGGXXXDATPAKEP---AGDDSNGDNP-----LVSIWKAYNSKLESDPLIMKMLTSFTGFLLGDLIAQTCITKGD-FDWFRLARLSSFGFFVHGSTSHFFYNFLDGKIPGKSAASVASKVFIDQVIWNPIFGVMFFSYVAALEGKGPEYVVNKVKKELLTSVTGSWKVWPIAHTINFRFIPSSQRVLYINSIQIGYNCFLSVISSRD 292
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: A0A7S3AZ01_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ01_9EUKA)

HSP 1 Score: 227 bits (578), Expect = 3.150e-66
Identity = 112/183 (61.20%), Postives = 135/183 (73.77%), Query Frame = 1 
Query:  343 DGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE 891
            DG+K     G+ W  Y  +L  QPLLTK+LTS TGFALGD+LAQ FI K    D  RLL+L+SFG L+HG+S H+FY FLD KIPG +A  V  KVFIDQVLWNPIFG MFF Y+ A +  G   + +K++N L T V GSW VWP+AHAINFR IP+SQR+LYIN+IQI YNCFLS+I+ RE
Sbjct:   97 DGDKDDFMAGM-WKGYSKMLDEQPLLTKALTSFTGFALGDILAQLFIQKTNPFDWARLLRLSSFGFLVHGTSSHWFYGFLDGKIPGKSAQVVFSKVFIDQVLWNPIFGIMFFSYVAAFELKGFDYVKDKVQNELLTQVTGSWKVWPLAHAINFRFIPSSQRVLYINSIQIGYNCFLSLISNRE 278
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: A0A7S2RA66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA66_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.660e-66
Identity = 106/171 (61.99%), Postives = 130/171 (76.02%), Query Frame = 1 
Query:  379 WAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE 891
            WAAY  LL +QPLLTK+LTSMTGF LGD+LAQ F+DKKE+ D+ R ++L SFG L+HG++GH+FY FLDSK+PGT  +TVA KV IDQV WNP FG MFF Y+G  +G   + I +KIK +L T+V GSW VW  AH INF  IP SQRLLYIN+IQI YN FLS +  ++
Sbjct:   14 WAAYNRLLETQPLLTKALTSMTGFTLGDVLAQNFVDKKEKYDVMRTVRLGSFGLLVHGTTGHYFYGFLDSKLPGTKPVTVASKVLIDQVFWNPCFGIMFFTYLGLAEGKSFADIMKKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNIFLSFLGNKK 184
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BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.020e-65
Identity = 103/172 (59.88%), Postives = 130/172 (75.58%), Query Frame = 1 
Query:  376 IWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE 891
            IWAAY   LA+QPLL K++TS TGF +GD+LAQKFI  +++ D  R L+L +FGAL+HG +GH+FY  LD+K+PGT  +TVA KV IDQ +WNPIFG MFF Y+G  +G     I +KIKN+L T+V GSWTVW  AH INF+ +PTSQRLLYINTIQI YN FLS +  ++
Sbjct:    4 IWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISPEDDYDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKK 175
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1300.2282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E5_ECTSI4.120e-16988.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9Q4_9STRA2.180e-9365.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FYX3_9STRA7.080e-7556.65Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7U673_9STRA5.860e-7464.80Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S2XWX9_9STRA3.420e-7156.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YKE1_AURAN7.110e-6964.88Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6T7UAW2_9EUKA2.110e-6656.50Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S3AZ01_9EUKA3.150e-6661.20Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2RA66_9STRA6.660e-6661.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LGB2_ECTSI1.020e-6559.88Peroxisomal membrane protein-related n=1 Tax=Ectoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1300contigE-fasciculatus_F_contig1300:10257..15722 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score495.4
Seed ortholog evalue1.9e-137
Seed eggNOG ortholog2880.D7G6E5
KEGG koko:K13348
KEGG Pathwayko04146,map04146
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_001560.1
Exons5
Model size1808
Cds size894
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1300.2282.1prot_E-fasciculatus_F_contig1300.2282.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1300 10257..14808 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927806.3213463-CDS-E-fasciculatus_F_contig1300:10256..105161622927806.3213463-CDS-E-fasciculatus_F_contig1300:10256..10516Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 10257..10516 +
1695995702.766752-CDS-E-fasciculatus_F_contig1300:10256..105161695995702.766752-CDS-E-fasciculatus_F_contig1300:10256..10516Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 10257..10516 +
1622927806.3346372-CDS-E-fasciculatus_F_contig1300:11014..112461622927806.3346372-CDS-E-fasciculatus_F_contig1300:11014..11246Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 11015..11246 +
1695995702.7804291-CDS-E-fasciculatus_F_contig1300:11014..112461695995702.7804291-CDS-E-fasciculatus_F_contig1300:11014..11246Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 11015..11246 +
1622927806.3496072-CDS-E-fasciculatus_F_contig1300:12913..130631622927806.3496072-CDS-E-fasciculatus_F_contig1300:12913..13063Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 12914..13063 +
1695995702.7896307-CDS-E-fasciculatus_F_contig1300:12913..130631695995702.7896307-CDS-E-fasciculatus_F_contig1300:12913..13063Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 12914..13063 +
1622927806.360025-CDS-E-fasciculatus_F_contig1300:13285..133961622927806.360025-CDS-E-fasciculatus_F_contig1300:13285..13396Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 13286..13396 +
1695995702.8027225-CDS-E-fasciculatus_F_contig1300:13285..133961695995702.8027225-CDS-E-fasciculatus_F_contig1300:13285..13396Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 13286..13396 +
1622927806.372333-CDS-E-fasciculatus_F_contig1300:14667..148081622927806.372333-CDS-E-fasciculatus_F_contig1300:14667..14808Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 14668..14808 +
1695995702.8122795-CDS-E-fasciculatus_F_contig1300:14667..148081695995702.8122795-CDS-E-fasciculatus_F_contig1300:14667..14808Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1300 14668..14808 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927806.3891976-UTR-E-fasciculatus_F_contig1300:14808..157221622927806.3891976-UTR-E-fasciculatus_F_contig1300:14808..15722Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1300 14809..15722 +
1695995702.8223135-UTR-E-fasciculatus_F_contig1300:14808..157221695995702.8223135-UTR-E-fasciculatus_F_contig1300:14808..15722Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1300 14809..15722 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1300.2282.1

>prot_E-fasciculatus_F_contig1300.2282.1 ID=prot_E-fasciculatus_F_contig1300.2282.1|Name=mRNA_E-fasciculatus_F_contig1300.2282.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=298bp
MKFTTALVGAGALCAGTDAFIPVAVPASSSRFVSKRSVVAAAAPAVLASR
GGDVMMSLGGGGSKKGGLPQSVSSKITNIFRGGSRKGNSNDGGVNGGGGN
GKVPPLGASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGF
ALGDLLAQKFIDKKEELDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPG
TAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWT
SVKGSWTVWPVAHAINFRLIPTSQRLLYINTIQIFYNCFLSVIAQRE*
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mRNA from alignment at E-fasciculatus_F_contig1300:10257..15722+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1300.2282.1 ID=mRNA_E-fasciculatus_F_contig1300.2282.1|Name=mRNA_E-fasciculatus_F_contig1300.2282.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5466bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1300:10257..15722+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGTTTACCACTGCTCTTGTCGGCGCGGGAGCGCTTTGCGCGGGCAC
AGACGCTTTCATTCCCGTGGCGGTGCCTGCCAGCAGCAGCAGGTTCGTTT
CCAAACGCTCCGTCGTTGCCGCCGCGGCACCAGCGGTACTCGCGTCGCGC
GGCGGCGACGTCATGATGAGCCTGGGAGGTGGGGGCTCCAAAAAGGGTGG
ACTCCCTCAGAGCGTGTCGTCGAAGATCACCAACATCTTCCGAGGGGGCA
GCAGGAAGGGGTGAGCGAGAAATCCGACCCTAAAGCGACTTCAATCTGCC
TCGTATGCATATGAGACGCGGCGGTTCCGAACTGCCATTTTGGACACCAG
CGTGTTGCAGCGTTGCAGCCTGCGTGCTGTGCTCGTCGCCAGCCGTCGCA
CCTCGGCAGCGTACTAGCTCTTTTACCACCCCTTCCCAAGGCGGTTCTAG
CTCATTTACGCCCCGTCAGAGAGTTGTGCAACGTGAACGTTTTCAGCACA
GAAAATACGAGCAGCAAACACAAATGAGAAGCTTTGACCCCAGCACCCTC
TCTACAAATACTTGTGTTGTTGTAGTCACGGAGAGATGTGGGATTTGATT
TCGAATCCTCGCCACTTTCGCGTCTCCAAACCGACGCTGTTCATGCACCC
AAATATCGCTTAGCTTTCCTCCACACCGCCCACGACTCGACCCCTTTGTG
TCTCTGCCCTGTCGGCGTCGATCCTCCCGGTCGTTTTTTCCTGCCCACCA
TGAAAAAGCAACTCGAACGACGGGGGTGTGAATGGGGGCGGCGGGAACGG
TAAGGTGCCTCCGCTCGGCGCATCTTCGTCTGCCGAGGGCGATGGAGAGA
AGAAGGCCAAGGGCCTTGGTGTCATTTGGGCGGCGTACATGAGCCTGCTG
GCGTCGCAGCCGCTCCTCACCAAGTCGCTCACCTCCATGACCGGCTTCGC
GCTCGGGGACCTGCTCGCTCAAAAGTTCATTGACAAGAAGGTGGGTTGGT
GTAATTCGCCTGTTTGCACCTGTCTAATTGTATGCATAGATGTATTGCAC
AGCAGCCGCCAGCAACGGCAGTAGTGTCGGCGTATCTCTGGGTAGGCTCC
GCCGCGAGGCTGCTTGGCCACGGCAATACTGCTGCTGCGACCAACGATGA
AGAATTGTGTGGATGTTTCGGTGAAGTACACATTAGGTGCTGGGTGCGGT
CTGCAGTCGGCTGCTGTTGCTGCTGCTTCAGGCAAGATGCTAGTGCCGAT
AATGTTGGTAGACACGTACATATAGACACCAGACGTCCCCGCTACAATTA
TTTCCACTGCCTCTCCTTGCGCGTGCTGCTTGCGGCAGCATACAAGTCGA
TCCCGCCGCTTCAACGGGCCATTACGATGTCCATGTTCAGCAGTCGTGCG
TTTGTCTACATATCGTACTGCTGTCGTTTGCAAGTCTCCAAGTGCGCTGA
AGTATTTACTGTTGTGTAGTACTACAAGTACCGCTTCGATCGTGGCGGCA
CCAAATCTAGACTGTTGCACGGCTTTTACCTCGATATCCGAAACACTTCA
CAGCAGTAGTATCTTTGGTCACACACCTCCCTGCGTGTCTTTTGATGAGC
TTCATACTGAATTGCGTGAATGCACGCACCGCTCCCGAGCACCTCACCAA
GTAGTACCGTACGTGTTGGACTACTGCTGTAGTGTTGGCACGGTCACTGC
CACTCGAGCAAACAGCAGTAGTGGTATTGATGCGCTGCACGTCCGTGTCG
GGCAGGGAAAATGCAGCAGTACGCGGCGAAGTTGCCACAGCTCTCGGCAG
CGCAACGCACGGCACCTGAACAATTTAAAGCGAAACAGTATTCGTAGTTG
CGCAGGTTGCACCAGGTTGGACGGGCGGGGGCGCACTTGCAAAAAGTGTT
TTTAGCACCATCCCATGAAGATGGCAATAGGTTGAGCATGGTGCAGCGGT
AGCTGGGCGACTGACACGCCCACAACAAGAGTCGCTGTCCTTGCTCCGGC
AAGGAAAAATAGACAAGGGGGCTCTAGACACAGCATCCAGCGCCAGCACA
AATTCCTCTAAACCACGGCGAACGTGTATCTCATGCAAAAATTACTACTG
CTGTCGGGCAGTGTAATTTACGGAGACACACCCAGAAAATTCCCCGGGGC
AAGTTTCGGACCTCGATTCCAGCGATGACATGATAGCCAGTGGTGTACGG
AATGTTCTGGGCCACTGTCTGAGGTGCTGTGTAACTGACGTCTGCGCTCG
GGAGAGCAAGTTGTTCCGAGATTTAGGTCAGGCTCATGTGCACAACCAAC
ACCCCTTCGCAACATCTTCTGTGTACACCTTCCCAGCAAAACGTGCAGTC
AGATGCACAAGATGCCACCAAACTTTCTTGTAGACCCTGTTACCCACTGG
GGAGAACCGCTGTGCACTGCTCAGGAAACAGTAGAAATACTGGTAGTGCT
CCGCTAATGCTATGAATCCATTGGTAAATTATCCTGGCCTCTTTTTCCTT
AGATAGAGATCGATTCGCGTTGTTATATTTTGAATGACAACAAAATGATA
GCATTTTGCCACACAGATTTCCTTCCTCTGGTGCTTGGTACACATCAGCT
GAGCAGGCGGCTTGTTCGTTTTTCCTAAGCTTCGCCGTCCGGCTGTCGTT
TCTTCAGGAGGAGCTTGACCTGCCCCGCCTCCTCAAGTTGGCGTCGTTCG
GGGCCTTGATTCACGGGTCGAGCGGGCACTTCTTCTACAACTTCCTGGAC
TCCAAGATCCCTGGCACAGCGGCCTTGACCGTCGCGAAGAAAGTGTTCAT
TGACCAGGTTAGTCCCGTGTCCCGTGGTGCTACTGTTTGCAACGCTTCCA
CGCAATAGCTCGGTGTAGGACGATCTCGTGTTTTGTAACATTGTTTTTCG
TCATCGTGGCAACCTAGAGGTTATCGGGAGTGGCGCGGGATACGCGTTTT
ATGATACACGTTTCATGTTATCGTCGAACGAGCTCCATACTCTTGTGTGT
TGTCGTCTTCTCTACTCGAATCCTGGCAGGTGCTGTGGAACCCCATCTTT
GGATGCATGTTCTTCGGCTACATGGGTGCCGTAGATGGCATGGGCCCCAG
CGGTATCTCGGAAAAGATCAAGAACAACCTGTGGACGTCGGTGAGTTCGG
CAAGATAGGCTTGGTTTCCTATCGCTTGGTGCTGTGAGACTAGACTTTCA
GACCCGCTTTCCGCTACAATAGCCGAGAGGGCCCCTCCATCCCATTCCAG
TGATTGGGAAGCCGATGACAGCAGTGCCACAGGCATAAACCCAAGGATTT
CGGCAGCAGTTCCTTGTGTTGACGGCATGTAATACCCGGGAGGGTTGGAA
AGTAGGGCATCATCACGCAGAATTTCAGGAAGCTGAAAGGCACGCCGACA
CAACACGAGTGGGCCGGGAGAGAGACCAGAGCTTTGCATGGCGAACTGGC
GAAGGGTGTTTGTGCTACGGCAGGTGTATTCCGACCCGATGGATGCTGAC
GAGGGTGCCTTGTTGGACGCATTTAGATAGCTTCAGTATGTTTGGTTGTG
CGGCGGCGATTCATCGTGAAAGGAGGAGGAGGTGAAACATGTGAGGCGGC
GTAAATTTACCAGCTGGCCCCGAGTTCGGAAGTCACGCGTAACTAATCAA
ATCAATACTTGGTGTAGCAGCGAGTTTTGGTGCCCGTGTTCAGCCTGCCG
GCGAACTCCAGTTCATTTGAAATTTGCCGCCGGGGGTCCAATGTGTTCGG
TCGAAAAGTCTATTCGGTAAACGCACGCCACCACGCCCGTTCGCCAGTCT
CATGTTTCGGCAGGTTCGAAGGCTGCCTGTTTTGTATCCTCGAGGAAAGC
GTTCCACGTCAGCCCCAATAGCATACGACGAAGACGCATTCGAAACTTCC
GCCCATCTATGTGTCTTTTTCTTATAGCAGTATATGTGGAACGAGATAGT
CATACGAGGGTCATCTGTGCTACTATAGTAGCAAATAGAACCTCGACAGC
ACGCGGGCATTTCCCGCTTCCAATACTTCACGACGGAACAGAGTTCGCTT
TGTTGGAATGACGTGCAGACAAGACGCTTAAAGCAACCACGTGTTGTGTT
GTACATGTACAACCATTCTGACCTCTACATATCCGATATCTCCTCTTCCT
CGCTGCTGTTTATGACGTACAAATTCAGATTTCCGAGATCTCAGGAAAGC
TCATACACGTAGTATTCGCCAATACAGCCCTTACTTGACGAAATGTCCCT
ACTACTACCAGTTTGTGGAGCCCATGGTTCATGCTCACATGCTGAGTCGA
AACCAACAGATGCTAAAGCACAACAAATGGGAAATACTCCTGAAGTGATC
TGACTCGACCGCATGTGTCCTCCCCGAACCTGCTGGTGTTGTTTTGGTAT
TCGCCCCACAGGTGAAGGGGTCGTGGACGGTGTGGCCCGTGGCGCACGCC
ATCAACTTCCGCCTGATCCCCACCTCGCAGCGGCTGCTGTACATCAACAC
TATCCAGATCTTCTACAACTGCTTCCTGAGCGTGATCGCCCAGCGGGAAT
AAGCTACGAAAGCCTTTGAGGAGGCGTAAGTAGTGACGATGGGTTAGATC
GAACTGGAGGGTTCCGTTCTTTATCGAGGGGGAACGGGGGGGGTAACCTT
TTGCACGGCCTCTCCGATTGGTTGAAGGCGGCACTTAATTATAGTGAGGC
AGGAGTACAAGGGGACTAGAGTTTTTCCCTATTGGTCACACTTGTAGTGT
TCTTGCTTTGTTGTTGTTTACTCGCTCTACACATTTGCACCCCCCCCTCC
TACAAAAACAGGAAGGTCCGTGGGGGTCTCGACCTGTGGAAGGTTACACC
CGCACTTAAACGTGGTGTAGGCCGTTTACTTCAGCACACGCCGTCGATTG
AAAAGGCAGCCGCACAATTTTAAGACGAGGGTGCCCTAAGCCGTCGGAAC
TCTCCTCATGCTGTTTGTCTTTTTTTGCCCTACTACAATACTGCTCTGTT
TTAATGCTAGTTTAACGCGGTGTCCCCCCGGAGGCAGCCGGTGTTGACGA
TTGGTTTTAGTGGTTGTTGAGATTTTTTTTTTGTGCTGGAGCTTTACATC
AAATTGCAGGCCTTCTCCTTTTGGTCGTTTTTTGTACATTCCGTGCGTGA
ATGCGCCCCCACGCAAGAGGGGCAACTCGTGACAACGGCTAAAGGAGGGC
TTCACCCAAATGCCAAGAGCGAGACTGACTTTGCTGCCTGCTGCGGCGAT
GGACTGGGCAATGCGGCAGTTGTTACGCGTGTCCTCCCGCACGCGCATAC
GTGCACGCCGCGAATGCGGAAGTACGTGTAACTTCTGCTTCGGATTCGGA
TTTTTTGTTAGTGAGACTCTGTGGGGCTTGCGCAAGGCTCTCGGTGGCCA
CAAGTCTGTCATTACTCTGTCAAGACTATTTCTTGTGCCTAACAGTTTTC
CGAAACTATTTCTTGT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1300:10257..15722+

>mRNA_E-fasciculatus_F_contig1300.2282.1 ID=mRNA_E-fasciculatus_F_contig1300.2282.1|Name=mRNA_E-fasciculatus_F_contig1300.2282.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1788bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1300:10257..15722+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGTTTACCACTGCTCTTGTCGGCGCGGGAGCGCTTTGCGCGGGCAC
AGACGCTTTCATTCCCGTGGCGGTGCCTGCCAGCAGCAGCAGGTTCGTTT
CCAAACGCTCCGTCGTTGCCGCCGCGGCACCAGCGGTACTCGCGTCGCGC
GGCGGCGACGTCATGATGAGCCTGGGAGGTGGGGGCTCCAAAAAGGGTGG
ACTCCCTCAGAGCGTGTCGTCGAAGATCACCAACATCTTCCGAGGGGGCA
GCAGGAAGGGATGAAGTTTACCACTGCTCTTGTCGGCGCGGGAGCGCTTT
GCGCGGGCACAGACGCTTTCATTCCCGTGGCGGTGCCTGCCAGCAGCAGC
AGGTTCGTTTCCAAACGCTCCGTCGTTGCCGCCGCGGCACCAGCGGTACT
CGCGTCGCGCGGCGGCGACGTCATGATGAGCCTGGGAGGTGGGGGCTCCA
AAAAGGGTGGACTCCCTCAGAGCGTGTCGTCGAAGATCACCAACATCTTC
CGAGGGGGCAGCAGGAAGGGCAACTCGAACGACGGGGGTGTGAATGGGGG
CGGCGGGAACGGTAAGGTGCCTCCGCTCGGCGCATCTTCGTCTGCCGAGG
GCGATGGAGAGAAGAAGGCCAAGGGCCTTGGTGTCATTTGGGCGGCGTAC
ATGAGCCTGCTGGCGTCGCAGCCGCTCCTCACCAAGTCGCTCACCTCCAT
GACCGGCTTCGCGCTCGGGGACCTGCTCGCTCAAAAGTTCATTGACAAGA
AGCAACTCGAACGACGGGGGTGTGAATGGGGGCGGCGGGAACGGTAAGGT
GCCTCCGCTCGGCGCATCTTCGTCTGCCGAGGGCGATGGAGAGAAGAAGG
CCAAGGGCCTTGGTGTCATTTGGGCGGCGTACATGAGCCTGCTGGCGTCG
CAGCCGCTCCTCACCAAGTCGCTCACCTCCATGACCGGCTTCGCGCTCGG
GGACCTGCTCGCTCAAAAGTTCATTGACAAGAAGGAGGAGCTTGACCTGC
CCCGCCTCCTCAAGTTGGCGTCGTTCGGGGCCTTGATTCACGGGTCGAGC
GGGCACTTCTTCTACAACTTCCTGGACTCCAAGATCCCTGGCACAGCGGC
CTTGACCGTCGCGAAGAAAGTGTTCATTGACCAGGAGGAGCTTGACCTGC
CCCGCCTCCTCAAGTTGGCGTCGTTCGGGGCCTTGATTCACGGGTCGAGC
GGGCACTTCTTCTACAACTTCCTGGACTCCAAGATCCCTGGCACAGCGGC
CTTGACCGTCGCGAAGAAAGTGTTCATTGACCAGGTGCTGTGGAACCCCA
TCTTTGGATGCATGTTCTTCGGCTACATGGGTGCCGTAGATGGCATGGGC
CCCAGCGGTATCTCGGAAAAGATCAAGAACAACCTGTGGACGTCGGTGCT
GTGGAACCCCATCTTTGGATGCATGTTCTTCGGCTACATGGGTGCCGTAG
ATGGCATGGGCCCCAGCGGTATCTCGGAAAAGATCAAGAACAACCTGTGG
ACGTCGGTGAAGGGGTCGTGGACGGTGTGGCCCGTGGCGCACGCCATCAA
CTTCCGCCTGATCCCCACCTCGCAGCGGCTGCTGTACATCAACACTATCC
AGATCTTCTACAACTGCTTCCTGAGCGTGATCGCCCAGCGGGAATAAGTG
AAGGGGTCGTGGACGGTGTGGCCCGTGGCGCACGCCATCAACTTCCGCCT
GATCCCCACCTCGCAGCGGCTGCTGTACATCAACACTATCCAGATCTTCT
ACAACTGCTTCCTGAGCGTGATCGCCCAGCGGGAATAA
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