mRNA_E-fasciculatus_F_contig13.2276.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13.2276.1
Unique NamemRNA_E-fasciculatus_F_contig13.2276.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: D8LTN0_ECTSI (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN0_ECTSI)

HSP 1 Score: 727 bits (1877), Expect = 1.760e-259
Identity = 376/391 (96.16%), Postives = 378/391 (96.68%), Query Frame = 3
Query:  474 MGCVNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSKSAGRKKSFSKLGSPRAAIERLQKLGSPLNSR 1646
            MGCVNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQ        VKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGL LKGDDQEGLKAAKE +A LTPEDTLTPEIAEDVS LWADEGMQELWSRRSEFW LDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSKSAGRKKSFSKLGSPRAAIERLQK+GSPLNSR
Sbjct:    1 MGCVNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQ--------VKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLALKGDDQEGLKAAKENIALLTPEDTLTPEIAEDVSKLWADEGMQELWSRRSEFWALDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSKSAGRKKSFSKLGSPRAAIERLQKIGSPLNSR 383          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: A0A835Z6Q6_9STRA (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q6_9STRA)

HSP 1 Score: 435 bits (1119), Expect = 4.550e-145
Identity = 226/366 (61.75%), Postives = 275/366 (75.14%), Query Frame = 3
Query:  474 MGCVNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSKSAGRKK 1571
            MGC  +   +  DA T EV+KQL+E    +Q   K+LLLGAGESGKSTVVKQ        VK+IYKG V+ KEK++Y  AIRRNVI+SMQT++D + + G+EL    + G   A  RV     E  L+  +A DV+ LWADEG++  + RR EFW+LDA+ YY +EA RLA+P+ E TDEDMIMTR RTTGI+VTEF D PY++SLVDVGGQRSERRKW+HCFDDVKAI+FL GLSGYHQVLFED +VNRM ESL+LF EV  NPIF  TP+FVFLNKKDLFE+MIV  SLK CFP YDGPDGE  PAL +IE+KY + M    PGK V VH++AARVRMDMKIAFGEVK++I+  + ++ AG+KK
Sbjct:    1 MGCALAKPTLATDATTAEVEKQLQEAQDKEQYQFKILLLGAGESGKSTVVKQ--------VKLIYKGVVTAKEKEEYTSAIRRNVIDSMQTMLDAMESFGIELA---RPGSGDAAARVRGADAEAALSEALAADVTALWADEGLRACYERRDEFWLLDASHYYFEEAMRLAEPDYEPTDEDMIMTRIRTTGIVVTEFEDKPYSFSLVDVGGQRSERRKWIHCFDDVKAIIFLEGLSGYHQVLFEDTAVNRMHESLQLFEEVVKNPIFTNTPVFVFLNKKDLFEQMIVKTSLKVCFPAYDGPDGEVRPALEYIEKKYTEVMDKYCPGKGVNVHVVAARVRMDMKIAFGEVKEQIKAIY-AERAGKKK 354          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: A0A6S9GGW2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GGW2_HETAK)

HSP 1 Score: 412 bits (1058), Expect = 6.930e-136
Identity = 218/366 (59.56%), Postives = 268/366 (73.22%), Query Frame = 3
Query:  474 MGC-VNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRL-----ADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSK 1553
            MGC  +SI  M+  A   EVD+ L E    ++   K+LLLGAGESGKSTVVKQ        +KMIYK GVSKKEK++Y  AIRRN I+ MQT+++ + TL +++    +E L  A  RV  +  + TLTP++A++++ LWAD G+Q  + RR+E+W+LDA PYYL E  RL     ADP    T+EDMIMTR RTTGI++TEF D P  Y++VDVGGQRSERRKW+HCFDDVKAI+FLVGLSGY+QVLFEDN+ NRM ESLELF +V  NPIF  TPI+VFLNKKDLFE +I   SLKKCFPEYDGPDGE  PAL FIE KYK  M    PGK+V++ +IAARVRMDMK+AFGEVKD +R    +K
Sbjct:    1 MGCGASSIVKMETTAEGAEVDRLLAEAQAEEENLFKILLLGAGESGKSTVVKQ--------IKMIYKNGVSKKEKEEYIGAIRRNAIDVMQTILEAMDTLSIDVS---KEELSEAATRVKEIAADATLTPDLAQNIADLWADAGVQACYERRAEYWLLDAAPYYLDEVLRLGAADYADP----TEEDMIMTRVRTTGIVITEFDDGPSRYNIVDVGGQRSERRKWIHCFDDVKAIIFLVGLSGYNQVLFEDNTQNRMTESLELFQDVVRNPIFADTPIYVFLNKKDLFEILIKDNSLKKCFPEYDGPDGEMQPALEFIEGKYKTVMEQHCPGKEVSLFVIAARVRMDMKMAFGEVKDMVRNFHQNK 351          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: A0A812S7L1_SYMMI (GpaH protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7L1_SYMMI)

HSP 1 Score: 374 bits (961), Expect = 1.940e-121
Identity = 201/357 (56.30%), Postives = 254/357 (71.15%), Query Frame = 3
Query:  474 MGCVNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYK--GGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRR 1538
            MGC++S     A+   NEVD  L+E    ++ + K+LLLGAGESGKSTVVKQ        VK+I+K  GG+S +EK DY  A+RRN IES+Q LI+   TL + L     E    AKE +A L  +  +   +A+ +S +W D+G+Q  + RRSEFW LDATPYYL E  R A  E +VT+ED++M R RTTGI+VT+  D PY Y +VDVGGQRSERRKW+HCFD+V AI+FL GLSGY+QVLFEDN+VNRMQESL+LF ++A NP+F  TPIF+FLNKKDLFE MI    L  CFPEYDGP G+  PA+ FIE+KY+  M    PGK V +H+I ARVRMDMKIAFGEVK+ +++
Sbjct:    1 MGCMSS----RAEPQQNEVDIMLKEAQEQEEMNPKILLLGAGESGKSTVVKQ--------VKLIWKVGGGMSNREKSDYRNALRRNTIESIQVLIEASKTLKIAL-----EDSALAKE-IANLQTDADMDETLAKKISGMWGDKGIQATFERRSEFWCLDATPYYLTEVFRFAS-EFDVTEEDILMARIRTTGIVVTQVPDPPYVYHVVDVGGQRSERRKWIHCFDNVNAIIFLEGLSGYNQVLFEDNTVNRMQESLQLFEDIAKNPLFRDTPIFIFLNKKDLFENMIPKYPLSNCFPEYDGPPGKVRPAVEFIEKKYQDIMNRVCPGKKVFIHVIEARVRMDMKIAFGEVKETLKK 338          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: D8LBA2_ECTSI (GPA4, alpha subunit of a heterotrimeric G protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA2_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 9.380e-108
Identity = 175/368 (47.55%), Postives = 244/368 (66.30%), Query Frame = 3
Query:  474 MGCVNSIRIMDADAATNEVDKQLEEL----ALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSKSAGR 1565
            MGC +S+   +    +  VD+QL E     A   + H K+LLLGAGESGKSTV+KQ        VKMIY+G ++  +      AIR+N IE MQ ++  + T  + L   +       K+RV     E   TP +A+D++ LWAD G++E + R+SE+W+LD   YY   A RL   +   TDED+IMTR RTTGI  T+F++ PY YS+VDVGGQR+ERRKW+HCFD+V+ +VFLVGL+GY Q LFED+S+N+M+ESL LF +V  NPIF  TPIF+FLNKKDLFE M+    L  CFPE+ GP+ +   AL +++ +Y + +   VPGK++  H++AARVRMDMK+A+G+VK++++R    K  G+
Sbjct:    1 MGCSSSVP--EEAKVSASVDQQLGEYNKMRAENSRNHFKILLLGAGESGKSTVLKQ--------VKMIYRGRIADDDLQQCVMAIRKNSIECMQGVLRAMDTFEITLGLAENA---PRKKRVREFAEEGVFTPAVADDIASLWADPGVREAYGRQSEYWLLDGASYYFDNALRLGQADFVPTDEDVIMTRIRTTGIDTTDFTEPPYMYSVVDVGGQRNERRKWIHCFDNVRCVVFLVGLNGYDQRLFEDSSINKMRESLNLFRQVVSNPIFRSTPIFLFLNKKDLFETMVKNTPLSVCFPEFPGPENDVHAALEYVQAEYSKILEEAVPGKELHAHVVAARVRMDMKVAWGDVKEQLKRMNSRKKMGK 355          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: A0A835ZKP0_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKP0_9STRA)

HSP 1 Score: 339 bits (870), Expect = 1.510e-107
Identity = 167/323 (51.70%), Postives = 234/323 (72.45%), Query Frame = 3
Query:  567 RHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIR 1535
            +++K+LLLGAGESGKSTV+KQ        V+MIYKG +S ++      AIRRN IESMQ ++  +   G+ L   + E   AA+ R+  L+ +  LT ++A+D++ LW D G++  + +R  +W+LDA  YY  E +R++DP+ E T+ED+IMTR RTTGI  TEF ++PY +S+VDVGGQR+ERRKW+HCF++VKA+V+LVGLSGY+Q LFED SVNRMQES++LF +V GNPIF+ TP+FVFLNK+DLFE+MI   SL+ CFPEY GPD +   A+ ++E  ++  M    PGK + + ++ ARVR DM+ A+ EVKD +R
Sbjct:   14 QNIKILLLGAGESGKSTVLKQ--------VRMIYKGRMSAQDVRQCVEAIRRNAIESMQAVLQAMKVYGIPL---EDEAKAAARTRIIGLSEDSALTKDVADDITALWNDGGVKACYEKRDLYWLLDAAAYYFNEVQRISDPKYEPTEEDVIMTRVRTTGIDHTEFIEHPYNWSVVDVGGQRNERRKWIHCFENVKAVVYLVGLSGYNQCLFEDASVNRMQESIKLFRQVVGNPIFKTTPVFVFLNKRDLFEQMIRKTSLRACFPEYSGPDKDPQAAIAYVENVFRSIMGEVCPGKQLYLQVVTARVRPDMQEAWTEVKDTLR 325          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: A0A835YY90_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY90_9STRA)

HSP 1 Score: 338 bits (867), Expect = 6.680e-107
Identity = 175/349 (50.14%), Postives = 244/349 (69.91%), Query Frame = 3
Query:  501 MDADAATNEVDKQLEELALA--DQ--RHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIR 1535
            M +  +T + D Q+ + A A  DQ   + K+LLLGAGESGKSTV+KQ        V++I+KG ++ K+      AIR+N +E MQ ++  +    + L     E    A+ R+  +  + T + ++A+D++ LW+D G++  + +R  +W+LDA  YY  E +R+ADP  E T++D+IMTR RTTGI  T+F + P++YS+VDVGGQR+ERRKW+HCF++VKA+V+LVGLSGY+Q LFED SVNRMQESL+LF +V GNPIF+ TPIF+FLNKKDLFE+MI   SL+ CFPEY GPDG+   AL+F+E  +K  M    PGK V   ++AARVRMDMKIA+ EVKD ++
Sbjct:    1 MGSCMSTQKEDVQIAKPAAAPADQPLTNFKILLLGAGESGKSTVLKQ--------VRLIHKGKMTAKDIRQCTDAIRKNSVECMQAVLQAMTVHSIPLAN---EANAEARTRILTIQEDTTFSQQVADDITQLWSDTGVKACYEKRDLYWLLDAAAYYFDEVQRIADPGFEPTEDDVIMTRVRTTGIDSTDFVEPPFSYSVVDVGGQRNERRKWVHCFENVKAVVYLVGLSGYNQCLFEDASVNRMQESLKLFKQVVGNPIFKDTPIFLFLNKKDLFEQMIRKTSLRACFPEYSGPDGDVHAALQFVEGAFKAVMNEACPGKHVHTQVVAARVRMDMKIAWSEVKDTLK 338          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: A0A6H5L0R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R0_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 5.450e-101
Identity = 174/359 (48.47%), Postives = 236/359 (65.74%), Query Frame = 3
Query:  474 MGCVNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTK-SLKKCFPEYDGPDG----EAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIR 1535
            MGC +S  ++ ++AA NEVD+QLE L   ++ H K+LLLG GE+GKSTV+KQ        +K IYKGG+   E+  +  AIRRN I+SMQ +++    LG+ L+G+      AA  RV  L     L+PEI +DV +LW + G++  +  R  +W+LDA  YY     R         +EDM+M R RT+GI VT+ +D  + +S+VDVGGQRSERRKW+HCFDDVKAI+F+V LSGY+QVLFED  VNRM E L+LF EV  NPIFE TPIFVFLNKKDLFE+M+     L +CFP+Y    G    +   A+  IE+++   +    P K++ VH+IA+RVR++MK AF +VKD I+
Sbjct:    1 MGCESSQPMVVSNAAKNEVDEQLERLQEEERTHYKILLLGPGEAGKSTVLKQ--------LKCIYKGGIPLAEQRMHGLAIRRNTIQSMQAILEATVVLGIPLEGE----AAAAAGRVLMLDEGTDLSPEIVQDVVLLWHNGGVRAAYGERHRYWLLDAAAYYFDNVERFGSESFAPNEEDMLMARARTSGINVTQIADGLHKFSVVDVGGQRSERRKWIHCFDDVKAIIFVVALSGYNQVLFEDTGVNRMHEGLQLFEEVVRNPIFENTPIFVFLNKKDLFEQMMTEGIPLTRCFPDYRPGAGCDASDVHQAVAEIERRFLDVIHRHSPRKNIHVHVIASRVRLEMKSAFSDVKDRIK 347          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: D8LID3_ECTSI (GPA3, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID3_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 2.110e-98
Identity = 170/359 (47.35%), Postives = 234/359 (65.18%), Query Frame = 3
Query:  474 MGCVNSIRIMDADAATNE-VDKQLEELALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFD 1547
            MGC  S      D +  E V+++LEE       H KVLLLGAGESGKST  KQ        +KM+ KG +S  E   Y RAIR N++ESM+TL+D   ++G+ L   + E  +A + R   L   D +   +  D+  LW D+G+QE W+R+ +FW+LD+TPYY++EA RLA   +++T+ED++MTR  T+G+   E  D P  +++VDVGGQR+ER+KW+HCFDDVKA+VF+V L+GY+QV+FED + NR+ E++EL+ +V  NPIF  TPI V LNK DLF EMI    L  CFPEY GP GE +PA+ FIE K K  M    P K +TV  I ARVR D+ + + +V D +R ++D
Sbjct:    1 MGCGES---KHGDVSPGEQVEQELEESRRNSHYHSKVLLLGAGESGKSTFGKQ--------LKMLAKGQLSVSEMALYRRAIRENLVESMKTLLDAAESMGIPLANAELEE-EAERVRSTELATAD-MPSTLGYDILKLWQDQGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTVVDVGGQRNERKKWLHCFDDVKAVVFIVSLAGYNQVMFEDATRNRLLEAMELYVDVVSNPIFRDTPIHVLLNKTDLFAEMIQEVPLSVCFPEYGGPPGEVLPAISFIEGKCKSIMAQCCPHKKLTVTPICARVREDVLLGWKDVTDTVRATYD 346          
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Match: A0A835ZGM8_9STRA (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM8_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.010e-96
Identity = 181/389 (46.53%), Postives = 248/389 (63.75%), Query Frame = 3
Query:  474 MGCVNSIRIMDADAAT--NEVDKQLEELALADQRHVKVLLLGAGESGKSTVVKQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSRRSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSKSAGRKKSFSKLGSPRAAIERLQKLGSP 1634
            MGC +S     A      N VDK LE  A  ++   KVLLLGAGESGKST  KQ        +++IYK  +S +E++  A A+R NV+ESM  L++ +    LE+   D   L  A +RV  +  +  LT E+A+DV  LW DEG+Q  W++R +F +LDA+P+Y +EA R+ADP  E+T+ED+IM+R+ TTG+ V    + P+ +S+VDVGGQR+ER+KW+H FDDVKA+VF+V L GY QV+FED + NRM ESLELF ++  NP+FE   IF+ LNKKDLFE+ I   SLK CFPEY+G DG  M A+ F+E K++  M    PGK +T H +AARVRM+ +  + ++   I+     K  G    FSK  SP+  +     LGSP
Sbjct:    1 MGCASSTGAGGAVDGNQKNAVDKLLEAEAEKEKFIYKVLLLGAGESGKSTFSKQ--------LRLIYKQAISAREREASATALRFNVLESMGVLLEAMHQQ-LEIPLADS-ALAPAAQRVL-MQRDGCLTVELAQDVQALWQDEGVQAAWAQRGKFHILDASPFYFREAVRIADPAFEITEEDLIMSRSTTTGVKVATLPEPPFEFSVVDVGGQRNERKKWIHIFDDVKAVVFVVSLVGYSQVMFEDPTKNRMHESLELFEQIVSNPLFEGVHIFLLLNKKDLFEQAIQHVSLKTCFPEYEGEDGNVMAAIEFVENKFRGVMAQATPGKPLTTHCMAARVRMECRQGWNDIMQGIKGEKGGK--GTLSPFSKH-SPQPGL-----LGSP 370          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13.2276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTN0_ECTSI1.760e-25996.16GPA5, alpha subunit of a heterotrimeric G protein ... [more]
A0A835Z6Q6_9STRA4.550e-14561.75GPA5, alpha subunit of a heterotrimeric G protein ... [more]
A0A6S9GGW2_HETAK6.930e-13659.56Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A812S7L1_SYMMI1.940e-12156.30GpaH protein n=1 Tax=Symbiodinium microadriaticum ... [more]
D8LBA2_ECTSI9.380e-10847.55GPA4, alpha subunit of a heterotrimeric G protein ... [more]
A0A835ZKP0_9STRA1.510e-10751.70GPA4, alpha subunit of a heterotrimeric G protein ... [more]
A0A835YY90_9STRA6.680e-10750.14GPA4, alpha subunit of a heterotrimeric G protein ... [more]
A0A6H5L0R0_9PHAE5.450e-10148.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LID3_ECTSI2.110e-9847.35GPA3, alpha subunit of a heterotrimeric G protein ... [more]
A0A835ZGM8_9STRA1.010e-9646.53GPA5, alpha subunit of a heterotrimeric G protein ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13contigE-fasciculatus_F_contig13:35138..43527 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score730.7
Seed ortholog evalue3.6e-208
Seed eggNOG ortholog2880.D8LTN0
Preferred namegpaH
KEGG koko:K04630
KEGG Pathwayko04015,ko04022,ko04024,ko04062,ko04071,ko04261,ko04360,ko04371,ko04540,ko04611,ko04670,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04730,ko04914,ko04915,ko04916,ko04921,ko04923,ko04924,ko04926,ko04934,ko04971,ko05012,ko05030,ko05032,ko05034,ko05133,ko05142,ko05145,ko05200,map04015,map04022,map04024,map04062,map04071,map04261,map04360,map04371,map04540,map04611,map04670,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04730,map04914,map04915,map04916,map04921,map04923,map04924,map04926,map04934,map04971,map05012,map05030,map05032,map05034,map05133,map05142,map05145,map05200
KEGG ModuleM00695
GOsGO:0001664,GO:0003674,GO:0003824,GO:0003924,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005834,GO:0005886,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0008150,GO:0009898,GO:0009966,GO:0009987,GO:0010469,GO:0010646,GO:0010810,GO:0010811,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019897,GO:0019898,GO:0022407,GO:0022409,GO:0023051,GO:0023052,GO:0030155,GO:0031234,GO:0031683,GO:0032092,GO:0032101,GO:0032103,GO:0032991,GO:0040012,GO:0040017,GO:0043393,GO:0043937,GO:0043938,GO:0044093,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044877,GO:0045595,GO:0045785,GO:0048518,GO:0048519,GO:0048583,GO:0048584,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050920,GO:0050921,GO:0050923,GO:0050924,GO:0051094,GO:0051098,GO:0051099,GO:0051716,GO:0065007,GO:0065009,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1900120,GO:1900122,GO:1902494,GO:1903664,GO:1903665,GO:1903667,GO:1903669,GO:1905360
EggNOG free text desc.G-protein beta/gamma-subunit complex binding
EggNOG OGsKOG0082@1,KOG0082@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04031,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGPA5, alpha subunit of a heterotrimeric G protein
Ec32 orthologEc-28_003480.1
Exons12
Model size2031
Cds size1176
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13.2276.1prot_E-fasciculatus_F_contig13.2276.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13 36040..43145 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927804.4118876-UTR-E-fasciculatus_F_contig13:35137..352671622927804.4118876-UTR-E-fasciculatus_F_contig13:35137..35267Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13 35138..35267 +
1695995701.9374404-UTR-E-fasciculatus_F_contig13:35137..352671695995701.9374404-UTR-E-fasciculatus_F_contig13:35137..35267Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13 35138..35267 +
1622927804.5092888-UTR-E-fasciculatus_F_contig13:35696..360391622927804.5092888-UTR-E-fasciculatus_F_contig13:35696..36039Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13 35697..36039 +
1695995701.9559987-UTR-E-fasciculatus_F_contig13:35696..360391695995701.9559987-UTR-E-fasciculatus_F_contig13:35696..36039Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13 35697..36039 +
1622927804.7345624-UTR-E-fasciculatus_F_contig13:43145..435271622927804.7345624-UTR-E-fasciculatus_F_contig13:43145..43527Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13 43146..43527 +
1695995702.0802047-UTR-E-fasciculatus_F_contig13:43145..435271695995702.0802047-UTR-E-fasciculatus_F_contig13:43145..43527Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13 43146..43527 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927804.5462375-CDS-E-fasciculatus_F_contig13:36039..360841622927804.5462375-CDS-E-fasciculatus_F_contig13:36039..36084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 36040..36084 +
1695995701.964642-CDS-E-fasciculatus_F_contig13:36039..360841695995701.964642-CDS-E-fasciculatus_F_contig13:36039..36084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 36040..36084 +
1622927804.5584598-CDS-E-fasciculatus_F_contig13:36431..365661622927804.5584598-CDS-E-fasciculatus_F_contig13:36431..36566Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 36432..36566 +
1695995701.9737153-CDS-E-fasciculatus_F_contig13:36431..365661695995701.9737153-CDS-E-fasciculatus_F_contig13:36431..36566Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 36432..36566 +
1622927804.5701337-CDS-E-fasciculatus_F_contig13:37688..377781622927804.5701337-CDS-E-fasciculatus_F_contig13:37688..37778Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 37689..37778 +
1695995701.9838872-CDS-E-fasciculatus_F_contig13:37688..377781695995701.9838872-CDS-E-fasciculatus_F_contig13:37688..37778Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 37689..37778 +
1622927804.5800889-CDS-E-fasciculatus_F_contig13:38163..383281622927804.5800889-CDS-E-fasciculatus_F_contig13:38163..38328Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 38164..38328 +
1695995701.9925857-CDS-E-fasciculatus_F_contig13:38163..383281695995701.9925857-CDS-E-fasciculatus_F_contig13:38163..38328Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 38164..38328 +
1622927804.5900455-CDS-E-fasciculatus_F_contig13:39167..392301622927804.5900455-CDS-E-fasciculatus_F_contig13:39167..39230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 39168..39230 +
1695995702.0032668-CDS-E-fasciculatus_F_contig13:39167..392301695995702.0032668-CDS-E-fasciculatus_F_contig13:39167..39230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 39168..39230 +
1622927804.6234553-CDS-E-fasciculatus_F_contig13:39435..395451622927804.6234553-CDS-E-fasciculatus_F_contig13:39435..39545Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 39436..39545 +
1695995702.0121193-CDS-E-fasciculatus_F_contig13:39435..395451695995702.0121193-CDS-E-fasciculatus_F_contig13:39435..39545Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 39436..39545 +
1622927804.6363153-CDS-E-fasciculatus_F_contig13:40645..407571622927804.6363153-CDS-E-fasciculatus_F_contig13:40645..40757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 40646..40757 +
1695995702.0205808-CDS-E-fasciculatus_F_contig13:40645..407571695995702.0205808-CDS-E-fasciculatus_F_contig13:40645..40757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 40646..40757 +
1622927804.673189-CDS-E-fasciculatus_F_contig13:41444..415911622927804.673189-CDS-E-fasciculatus_F_contig13:41444..41591Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 41445..41591 +
1695995702.0325308-CDS-E-fasciculatus_F_contig13:41444..415911695995702.0325308-CDS-E-fasciculatus_F_contig13:41444..41591Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 41445..41591 +
1622927804.6880658-CDS-E-fasciculatus_F_contig13:42024..421111622927804.6880658-CDS-E-fasciculatus_F_contig13:42024..42111Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 42025..42111 +
1695995702.0472958-CDS-E-fasciculatus_F_contig13:42024..421111695995702.0472958-CDS-E-fasciculatus_F_contig13:42024..42111Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 42025..42111 +
1622927804.7082908-CDS-E-fasciculatus_F_contig13:42709..427841622927804.7082908-CDS-E-fasciculatus_F_contig13:42709..42784Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 42710..42784 +
1695995702.0599928-CDS-E-fasciculatus_F_contig13:42709..427841695995702.0599928-CDS-E-fasciculatus_F_contig13:42709..42784Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 42710..42784 +
1622927804.7196207-CDS-E-fasciculatus_F_contig13:42998..431451622927804.7196207-CDS-E-fasciculatus_F_contig13:42998..43145Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 42999..43145 +
1695995702.0699673-CDS-E-fasciculatus_F_contig13:42998..431451695995702.0699673-CDS-E-fasciculatus_F_contig13:42998..43145Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13 42999..43145 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13.2276.1

>prot_E-fasciculatus_F_contig13.2276.1 ID=prot_E-fasciculatus_F_contig13.2276.1|Name=mRNA_E-fasciculatus_F_contig13.2276.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=392bp
MGCVNSIRIMDADAATNEVDKQLEELALADQRHVKVLLLGAGESGKSTVV
KQASKGGILNVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLG
LELKGDDQEGLKAAKERVAALTPEDTLTPEIAEDVSMLWADEGMQELWSR
RSEFWVLDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDN
PYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNR
MQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDG
PDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVK
DEIRRSFDSKSAGRKKSFSKLGSPRAAIERLQKLGSPLNSR*
back to top

mRNA from alignment at E-fasciculatus_F_contig13:35138..43527+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13.2276.1 ID=mRNA_E-fasciculatus_F_contig13.2276.1|Name=mRNA_E-fasciculatus_F_contig13.2276.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8390bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13:35138..43527+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAAGGAGCTGCAAGAGGACGAAGAAAGCGTGGTGTCTGGGGGGGGCGACG AGGTAAACGCTCGGTGTTCCGATGGCAACGCCAGACACGCGTTTGAATCC AATCAGCTCTGAGGGTTGGTAAACAAACAGGTGGGTGAGCGTGGTTGTCG TCGCGACAAACAATTGTGCCACGCGAAGCGTGGCCACGCTTGGCGTACTT TCGTTCCGTGGGCAGACTGGGTAGGAAAGACTTTCGCTCGTGGTATGCCC CAAGTCACACCGTGTTGGCGTTATGTTGACACGTGTCTCGCTTCACGTTC GGGTACACGCCAGCAAGAGAGCACACCTGCAACGCAGGCTACGCATCAGT CCGACCGGTAGGTAGGAAAGCACGTGCTTGCGCGACACGTACGTCAATTG CTGGAACTTACTCAAAGAGGGCTTCACGCCCCCCGCAACATTGCTCCTCG TGGCACTCCAATGCCTAGTTTACACCATATCCCTCGCCCCGGGCGCTCGA AACTCCCCGTCTATGTGTGCACACCGCGCTCAATATGACTCGTGCTCAAC ACGTACTAGTCTACAGCACACGTTTGTTGGATCTGTGGGAGGGCGTGTTT CCGGCACATCAAAGGGAGGGAGAGGGGCCTGTCGTACCAGTTAATTCATC TCCGGGCTCTCACGTACAACTCCACCACACACGCGGATAACAACCGCACA CACCGCCAACCTTCCGGAAGTGTTCTTCATCAACCAGCACGCGTGTGTGT TGTGCGGGGCACGCGTGCTGGTAGCTCGAACGGGAGAGGCTTAATTGGGG CGATCGGTGGCATACCGGCAGCAAAGGTTCTTGGGTCCGGACCAGGGAAG CAACCAGGGAGGAGCTGTCCCGCGCCTGCCGAGGGGTGGGGCGAAGACTA CCATGGGATGCGTCAACTCAATTCGGATAATGGACGCCGACGCTGCGGTG AGATAAACCAATCACCGTGTGCAAATGGTTGGTTGCGCTGGTCTGTGTCA GCCTCTATGTTTACAGTTGCTTTGATTGTACGTACTTGAAACCACACACC AAACGTGGATTCTTCTACATACAGTACCACATTGTTTTATGCAAGCAGAA ATAAACTTCGGTCTGTTGTTTACTAGAATGTCTTACCAGCGGACACAGAC ATGGATCGCGCAACAGGTAGCGGCTTCTGGGCCATCGACAAATCTTCTCT CCAACAAGTCACGGAAAACGCTTGGTATCATCAACTAAGCGGTATATGTA CACTTGAGGTGTTGGCACTCTTCTCCCCTTGACCGTTTTTGCAGACAAAT GAGGTGGACAAGCAGCTTGAGGAGCTCGCCTTAGCAGATCAGCGTCACGT CAAGGTTTTACTCCTCGGTGCAGGAGAGTCGGGGAAGAGCACAGTCGTCA AGCAGGCAAGCAAAGGCGGCATATTGAACGTGCTGCGAAACGGTCTGTGA GCTAATATAGCTCTCGGAACTATGCATTGATCGAGGTCTGATTTAGATTA GATAAGACAGTTGTCAAAGCTCCGGTTGGAACAATTTGCGTGTAACGTAC AATATACGAGTGTGCCGCAAGCCCGGAAGCGGGCGGAATTCACAGAAAAA ACGAAACACGGGCCGACGCATGTTTGTCAAAAGCTTCAACATCGGCTTGA ATATGAATATGGGCATACGAAATGTGTGTATGCTCAATTTGATTTAACTT GCGGGGTGTGGGTATTGCATGGTGGCACCTGGGACAACTCTACTCTGTAG GCTGCACCATATTCTAGGTTGCCTCAGCGAAGTTCTACGAAACGTTAGCT AGATGGTCTTTTTCGTCAGGGAGAGAAGCACTGTGTGCAGCTCTGCCAGT ATTTTCAGCGGAACCAAGGTAGTTGGGAATGTTGGTGTTGGTGTAACAGA GGACAGGTTAGTTCCAAACCGACCGCCTGCCCACAAGAGCCGGAGAGCAC CACATGCTGTCTGCGGCCAGAAATTTCTCGAAGTAGACTGTCAACACAGA TCTCGCTGTGTTGATAGAGACTGGTGTCCAAGGGTTCGGATCTCGGTCGG GGAAAGGTGCACGTTTCGTACGCTCCCTCATTTCCCCGCCCATTCGGGTG AACCTTCGACGTATCATGCATATGTCCCGCTTTGAACGTAGTGCGAGGGT CTCCGACAGAACACGAAAGGGAGGTTTGGTTAAGGACGTACGAAAAATCA ATCCTTTTTGGAAAAACCATCGGATTGCCATGGGCGGTTGTAGGGTATGG CGAAAAGCATCACGGAAGTACCGGGCTTGCGAATGAGAGACGAAGAGAAG TCGTTCGAACGCTCTGTCGAAGCTAGGTGATGACACAAAGGTACTCTTAC AAGTGCCAGAGAGAGTAGTGCAGAGACAAGGAGAGGGTTGGACGCATAAA AAAATTGATGATTGCCGGCTTGAGGAGCTGCTACAAGTAGGTAGGGCTTT CAGGCGTTGATGAATGGCATTGTACCAGAGGGAAGGCCTTGAGATCAAGA ACAGCGACATAAAGCGCGACTCTTCCTCCGTCCTTGTGTGTTGGCCGACA GGTGAAGATGATATACAAGGGCGGGGTATCGAAGAAGGAGAAAGACGACT ACGCCAGAGCGATCAGACGAAACGTCATCGAGAGCATGCAGGTGAAGTGG GCAAGGCACGAGCAAGCGCGTTGAGCGTGCCAAGCGCGTTTGTTGGACCG ATTGCACGTCGCGACAGTTCTCAGAAGATAGGCTATTTCGCTTACTTGTT CTTGTTCTTGTTCTGATACCCCTCCTCCGTGGCGCACAACCCTGCGCAGT CCCTATTGTATTGAATCGAACTACGAATACAAGGCAACCGCCTGGCGACG TATTCAGCAAGAGTGCAGACATACCGTCGTCCTACAGTTGAACCAAAGAC AGTTCGCAAACCAGCAAACAAACGGCACGGTTGAGATGGAATTGGACCGT TTGCTACACGTATCATGTGACGTACGAAGAATTACACGTTTTTTTGCCTT ACTCTGCCCGTCTAACCCCACGTCAGACTCTGATCGACACGCTCGGGACG CTCGGATTAGAGCTGAAAGGCGACGACCAGGAAGGACTGAAGGCTGCGAA GGAAAGAGTTGCCGCGTTGACTCCCGAAGACACCCTGACCCCGGAGATAG CGGAGGATGTGTCCATGTTATGGGCAGACGAGGGAATGCAGGTGAGACGA AACAGGCGTCACAGGCAATGCAACATTGCCAAAACTCAAATCGTACACCA GTATGACAACGACAGATAGATGCAATTTCGTGATATTGTGCGCCGAGGCC ATGGACGGTCAGGTCGCAAGCCGCGTATTTGCTTGCTCAGGGGCAGCCAA GGTGATGGTGAGTGATTTCAAGCGTTCCACTGCGAACCATTATGTGTACA AGGATGCGGTCGCGTCAAAGAAGAAACGCTGACCCAAGGAGTTGCTCAGA GGGATATCCTCTTTCACTTGCAATGGCCGCAGTGGAAATGAGTCTTGTTA CAATGGGCAATGTCGAACGCCCCAACCATCTGCTGACTCAGCGGTTCGTT GGTGCCATTCAAGAATTAGTTGGAAGCGCGGCTGCCGCGGATACCACCGA CGCTTGGTTTTTCCGTGTCATCCAAACCAGTTGCTCGTAAATTCTGCACC AACCTTGCGCCCCTGCCCGTGAGATGAAAACTGTCACGCAACTCGTACGC GGTAGGTGCCATGGGCATGTGGAGAGAAAAGGGTTCAGCAGTGCATGGTA TCACTATCAAGCGCTTTTTCAATGTGCTAGGGTAAAAAAGTGACACGAAC GACGCTACAACGTCACAGTTGTCTATTATATCCACAATGGCGACCAATGA ACGTGCTCTATCGCCTGGGACAGCCGAAGAAATGCAGTATCATCCCTCCA TGAAGTAGCGGGCGCTTCCTAAGCGGGAAGCCGTGTTTGAGCTCGATTTC GCAAAGGACGAAACCGCTAGCCAACGCAAGACACTCGCTATGTCCTTGAT GTTGCTTCTCCCAATCGCTCGACATTTCAGGAGCTCTGGAGTAGGAGGTC GGAGTTCTGGGTTCTTGACGCGACGCCTTACTACCTCCAGGAGGTGAGCG CATCGGCGTGGTATGATGTCGAAATTTGCGCTTAGAGTGAGCAACGTGCA TTGGCTGGATAGGCTCGAAATTTTGTACCTTAGTGTCCGGTACCAAGTTC TCGTACCAGGGTTGTTTCTCCTCAACACCACTGCTGTAGTCTCTTTCCCA CGCCTTTGTCTGTGCTGTCTGGTGCATACTACCCTTTTTATTCGGCAGGC ACGTCGATTGGCAGATCCGGAGCTAGAGGTGACCGACGAGGACATGATAA TGACGAGGACCAGGACCACGGGAATTATCGTTACCGAGTTTTCGGACAAT CCTTACACGTGAGTGCCTGGGCCTGGAGCACGAAAACAGAAGAAAATGTC CAAACCCCCAGACGCCGGCACACATGGCCACCCACTTACGAGCCCAACAA CACCAGCACCATCAGCGCCAAACCAGAGTATCACCACACAGCCACAACCA GCGGCAGCAGCAGCAGCAACAGCAACAACAACGACAAAGTTTTACCATCA CCTTGAGGGCCAGGATTACGCATATTGTTTGTGCTCACTGATTCCAGCAT GTCCTGCGAACCTTAAGGGCATTGCTCTTTTGCACGGGTCAAGGGCAGAG TCTGTTTTTGCTAGTGCCCTCAAGCTCATGCCCAGAGCCTGCAGGAACGG ATTCGATGACGTTCACAAGGTAGTGATCCTCGGAAACGGGGAACATGTCT CATTTAAGATGGATGCGGGAGAATGTTGCACGGATAAATCCTGGAAGTTG TTCTGGTTTCGTTGGACCGACCGCGACAATCAATCACGATCTTGGTGCCG TTTGCAAGGATCTCCACGTACGTATTGATGCCACCGTGCATATTAAGGTG GTTGGAATAGATGCAGGTTGCCAATCCTTCGATGCTCGTCCATTTATTCA AGTATTATTCGAAGGCAGAGATTGTGCCTAGCTCATTTGTGTTTTTGGAA GATAAACGCCCTACGATCAATGAATGGCTCAACACACAAGACGCCACGAG TCGTTCCACACCAAATTTTCCCAAGCATCTGCATCGAGGAACGACAACCC AGAACAAATGAGAAAATATAACTCTAGATAAACCGGTATCGCGACGCACC AGACACACGCATGACCACCATTACGCTGTTGTACCCTTCGCATAGTCTAA ACATAAGGCTCACATACATGAAGGCTAAGTGGTAGAAGTAGAGGCATGCA TCCTTGAATCAATAGATAGACCACGCGAACAAGAGGCAATCGTAATATAT CATATCTTATGCTCGTGGCAGACGAGCTCATCAATTGACGGACGAAGTCC ACAAATCTCTCGATTAAGGTTTTGCCGTGCCAACACGTAAGCCATGCTCG TTGAAGAGTCGTTCATTATTCGCTTCATGCACCGTGACGGCCGCAACGCC GCAATCAGGTACTCGCTCGTAGACGTCGGGGGACAGCGGAGCGAGCGGCG AAAATGGATGCACTGCTTCGACGATGTGAAGGCGATCGTATTTCTCGTGG GACTGAGTGGTTACCACCAGGTGCAAAACCATAGAATATTCTATATCTTG TCTCTAGTGTGCCCAACCTCTCGACCCGAGGTCCGAGGCAGGTGTGGACA AGCTCATTCAAACAGCGCGAGGGTGGTCGGTGTTTCGCCAAGCGGTGCGA CGTCGAGGTCAGAACCTCATAGGCGTTGTCGACAGCAACTTGCAGAAACA AGTGACCATCATGTTGGTTCGTGTGAAACCGGCATTCTATCACACGGTTG AAGCCGCATATTTTGGGCGGAAATGCTTGAATGGTACCAAATTGTGTCAA GGGGGGTCGGGGAAGTCCCTACAACGTTTTTGGAGGTAGTTCACATTTCG CCGCGAGTGCTGTGTGTCCCGCGAAGAGACCTATACCACAGAAGGAGGCT CCCAGCCACGAAACAGGCGCGATTGAAACGCTGCGCATCGAAAAGACATC ACTCGACCGAATGAAGGAGACACGCGAATTGGTGGTCACTTGGCCTTGAA TTAATCGAATTGGTGGTCACTCTTGATAAACGGGCTTGACCTAGAACAAT AAAGAGGCACGTAACGCGGAGAATGGCGCGAAAAACACTTGTGCGCGTTC GGGGAATCATGATGCATTTCCTCACTGCCAAAGCACGTCTCGACAATGGC CAAACAAGCGCTGAATTCAACACTTTGTTGCGTCTACAATGAATGAACTC CCCACAGGTGTTGTTTGAGGACAACTCGGTCAACCGGATGCAGGAATCAT TGGAGCTCTTCACCGAAGTAGCGGGGAACCCCATATTCGAGAAGACTCCA ATATTCGTCTTTCTGAACAAGAAGGATCTCTTCGAGGAAATGATCGTCAC GAAGGTAGGCACAGAATAGCCACATAGCATTCCAAATGAGGCGGAGATGG CCGTTTCTGAAGCAGGCATCACCTCGTGCTTGACGGCAATGGGAGTGTTG CGGGTGGGAATGACGAAAATGGGTAGCCCACACAGGTTTCCAGTAGATTT CCATGCAGTAAGAGATGGTGAGAAGTGTCTTCACAGCTGGGGAAACGAAA CAACAACAACTACGGCGGACCTACTCATACAATTGATCAGGGTGGCTGGC AGTACACTGCTTCAGGCATCTCCGAGCGAGTGGGAGGTAGAGAGAGCCAC GAAAACGATAGCAGAGAAAAGGAGGGAATGGATGGACGAATGAATAGAGG AGGAATGAAAGTTCACAGCCCCAAGTTCACTGAAACAAACTTGCGCTGTT CCCGTGCATTTTCCACAACTGGTTCTACGATGTTCAGAGCCTGAAGAAGT GCTTCCCGGAGTACGATGGTCCAGACGGAGAGGCCATGCCAGCATTGAGA TTCATTGAGCAAAAGTATAAGCAGGTGCCCGAAAGTATTACGTGAGGCGT TGATCTTCCAGAACTTCGCGATGTACGGAGCAATTCACTCAATCAAGACT ACTCTGTATGACGCTGGAGTGAGATTGACTCTAAACGCCCTAGGCTGCGG AGTAGCCTTACAATAGAGGCACATGTGGAGATGCACTGGAACAAGAGCGC GCCTGGTGTTGTAGGACTTTCGATATTCTGTGTGACGAGCAGTCGAGTGA AGACGACACGTGAATCTGAGGTACAGGGAGGAAACCTTGACGTGCACGAT GTTATGTTAGGTACGTGTTCAAACTGTTGCCAGGCACTAATGGGGTACCC GGCACAAGGACTGAAGGTTCCAGATAGTACAGTCAGCGGAACCCTGTACA CCACACCAATTGGTGAAAACTAAGCAACACACGCACGGGCAGGCACTACT TTACATGAGGAACATCGAAGAATGGATTCAGAGGTGAAACAACCACGATC GGTTGGACAAATTCGGTGTGAACATCGGCCATGAGACTATCCGAAAAACA GCAATAATAATAGGCAACCTTCAGTACTTACCCCGCCCCCCGATGTTCTG AAACATCGGTCTATCGATATAGGCAATGCTGAGCAAGGTCCCGGGGAAGG ACGTTACCGTGCACATCATCGCGGCGAGAGTCAGAATGGACATGAAGGTG GGCGATGGTGCTAACTAACCAGAGAAGTAGCGAGGGAAGTAGAGTCACGC GCATAAATCACGACAGACAGAGCCCATCAGATGTCATGCCAGGGTTCAAG AAGACGAACGGTAAGAACTCCAATGGGTCCCACAGGAACAGAATGGCGAC AAGACACACCACATTTACTGCTGTGCACATTGGCCTATGTTTTCCTACGT TTTTTCTTCAGATCGCTTTTGGGGAGGTGAAAGACGAGATTCGGCGCTCC TTCGACTCGAAATCGGCGGGACGCAAGAAGTCTTTTTCGAAGCTGGGCTC GCCTAGAGCAGCGATAGAACGGCTTCAGAAACTTGGTTCCCCCCTAAATT CAAGATAATATGGGGATGCAGGGGAACGCCGTCGACGTTGTTCTTGTGTT AGTCGTGTGTTCGCGCGAGTGGAGGGACTCATGTCTTCTGATGTCGTTAC GGAACAAGCGTAGATATATGAATACAAGTACTGTATAGTCCCTGCTGAAG ATAACACGCTGACCGTCTCAGTTCAAGAGAGGGCTTTCATGCGTGCGGCA AATACCAGTCCTCTACTGTGTAGCGTAATCAATAAAATGCAAAGGGTTTT AGAAATTCAAACAGATTTAGCCGCAGCTGCTGTTGGTTCAATATCCGTCG TTTTGCGGTACACTGTGTACCTGGTAGAGGCAATACTAGACGCCCATGAC GGCCGGTAAGTAAGGTAAAGAGAACGACAAAGAATGAAAG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13:35138..43527+

>mRNA_E-fasciculatus_F_contig13.2276.1 ID=mRNA_E-fasciculatus_F_contig13.2276.1|Name=mRNA_E-fasciculatus_F_contig13.2276.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2352bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13:35138..43527+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGATGCGTCAACTCAATTCGGATAATGGACGCCGACGCTGCGATGGG
ATGCGTCAACTCAATTCGGATAATGGACGCCGACGCTGCGACAAATGAGG
TGGACAAGCAGCTTGAGGAGCTCGCCTTAGCAGATCAGCGTCACGTCAAG
GTTTTACTCCTCGGTGCAGGAGAGTCGGGGAAGAGCACAGTCGTCAAGCA
GGCAAGCAAAGGCGGCATATTGAACACAAATGAGGTGGACAAGCAGCTTG
AGGAGCTCGCCTTAGCAGATCAGCGTCACGTCAAGGTTTTACTCCTCGGT
GCAGGAGAGTCGGGGAAGAGCACAGTCGTCAAGCAGGCAAGCAAAGGCGG
CATATTGAACGTGAAGATGATATACAAGGGCGGGGTATCGAAGAAGGAGA
AAGACGACTACGCCAGAGCGATCAGACGAAACGTCATCGAGAGCATGCAG
GTGAAGATGATATACAAGGGCGGGGTATCGAAGAAGGAGAAAGACGACTA
CGCCAGAGCGATCAGACGAAACGTCATCGAGAGCATGCAGACTCTGATCG
ACACGCTCGGGACGCTCGGATTAGAGCTGAAAGGCGACGACCAGGAAGGA
CTGAAGGCTGCGAAGGAAAGAGTTGCCGCGTTGACTCCCGAAGACACCCT
GACCCCGGAGATAGCGGAGGATGTGTCCATGTTATGGGCAGACGAGGGAA
TGCAGACTCTGATCGACACGCTCGGGACGCTCGGATTAGAGCTGAAAGGC
GACGACCAGGAAGGACTGAAGGCTGCGAAGGAAAGAGTTGCCGCGTTGAC
TCCCGAAGACACCCTGACCCCGGAGATAGCGGAGGATGTGTCCATGTTAT
GGGCAGACGAGGGAATGCAGGAGCTCTGGAGTAGGAGGTCGGAGTTCTGG
GTTCTTGACGCGACGCCTTACTACCTCCAGGAGGAGCTCTGGAGTAGGAG
GTCGGAGTTCTGGGTTCTTGACGCGACGCCTTACTACCTCCAGGAGGCAC
GTCGATTGGCAGATCCGGAGCTAGAGGTGACCGACGAGGACATGATAATG
ACGAGGACCAGGACCACGGGAATTATCGTTACCGAGTTTTCGGACAATCC
TTACACGCACGTCGATTGGCAGATCCGGAGCTAGAGGTGACCGACGAGGA
CATGATAATGACGAGGACCAGGACCACGGGAATTATCGTTACCGAGTTTT
CGGACAATCCTTACACGTACTCGCTCGTAGACGTCGGGGGACAGCGGAGC
GAGCGGCGAAAATGGATGCACTGCTTCGACGATGTGAAGGCGATCGTATT
TCTCGTGGGACTGAGTGGTTACCACCAGGTACTCGCTCGTAGACGTCGGG
GGACAGCGGAGCGAGCGGCGAAAATGGATGCACTGCTTCGACGATGTGAA
GGCGATCGTATTTCTCGTGGGACTGAGTGGTTACCACCAGGTGTTGTTTG
AGGACAACTCGGTCAACCGGATGCAGGAATCATTGGAGCTCTTCACCGAA
GTAGCGGGGAACCCCATATTCGAGAAGACTCCAATATTCGTCTTTCTGAA
CAAGAAGGATCTCTTCGAGGAAATGATCGTCACGAAGGTGTTGTTTGAGG
ACAACTCGGTCAACCGGATGCAGGAATCATTGGAGCTCTTCACCGAAGTA
GCGGGGAACCCCATATTCGAGAAGACTCCAATATTCGTCTTTCTGAACAA
GAAGGATCTCTTCGAGGAAATGATCGTCACGAAGAGCCTGAAGAAGTGCT
TCCCGGAGTACGATGGTCCAGACGGAGAGGCCATGCCAGCATTGAGATTC
ATTGAGCAAAAGTATAAGCAGAGCCTGAAGAAGTGCTTCCCGGAGTACGA
TGGTCCAGACGGAGAGGCCATGCCAGCATTGAGATTCATTGAGCAAAAGT
ATAAGCAGGCAATGCTGAGCAAGGTCCCGGGGAAGGACGTTACCGTGCAC
ATCATCGCGGCGAGAGTCAGAATGGACATGAAGGCAATGCTGAGCAAGGT
CCCGGGGAAGGACGTTACCGTGCACATCATCGCGGCGAGAGTCAGAATGG
ACATGAAGATCGCTTTTGGGGAGGTGAAAGACGAGATTCGGCGCTCCTTC
GACTCGAAATCGGCGGGACGCAAGAAGTCTTTTTCGAAGCTGGGCTCGCC
TAGAGCAGCGATAGAACGGCTTCAGAAACTTGGTTCCCCCCTAAATTCAA
GATAAATCGCTTTTGGGGAGGTGAAAGACGAGATTCGGCGCTCCTTCGAC
TCGAAATCGGCGGGACGCAAGAAGTCTTTTTCGAAGCTGGGCTCGCCTAG
AGCAGCGATAGAACGGCTTCAGAAACTTGGTTCCCCCCTAAATTCAAGAT
AA
back to top