mRNA_E-fasciculatus_F_contig13.2275.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13.2275.1 vs. uniprot
Match: D8LTM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM9_ECTSI) HSP 1 Score: 1775 bits (4597), Expect = 0.000e+0 Identity = 1099/1398 (78.61%), Postives = 1174/1398 (83.98%), Query Frame = 1
Query: 1 MTAAAPAWEDDYFPASSQPSVVDQRQRTATAAELDANMEENDLDLSKPTLAAAVIRDAERLCLQQRERTSQAMETALAEVVKAERAAQADTVRHQLRDLHDDENDGQDDRGRAWTPHTRVGHRNSWDRKAKVGRATGLGRPPPWAKVFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPVPVRRGTMVSAVLAAVAESPSSPPSTSSEQKGTIGDAGPVLDDDWVVRKFAQIRRRSRSIDSAIGDISGLHKQAQPSTPVVDARKTSPNNNPMRIGGMVTLEPLLQRDATAASDAGSLSTDSGILPHLPHGGETLRPLPLASREDQGQHHDATDQATVDDIVAPEEELQGNRLPPTSQDEKYEDPPLESPGNPFGGAEYTQPWPHVRPSPREGQHGISAQPATCEQDRAPAARRATQEERLQQEGKLFDVSPEERALSLPSSSLVADDGSGELHPLGRSALWDARGPASAGGGRGTGLDGRSGQGGSAGAEGGTLWSRXXXXXXXXXXXXXREEAKNAKERRAKMVLEVLARSEHIFRCNAERRRRRSSVNDIGKRALENEATKDGEERRAAIAPKSETRPYTSPASGGRQPAKVMAASTVAAGNDNINSRGNDATTNTRKDNGSKPNLRNQSSNVRGGKLRSSFLGPDHHPDKHESPAGHGPTAAGAALVGEEGVKMEQRESGVFVAAKRVAARKRLERAEEEARKQVPSTSRHVARPASAPTSSGISSTRPSGLSLGSPEGSTTILGVSTPPAAGTSGSNRDVLVRVRVPVAAQEATTATTGSTTGAPRGGDTPLPDTQGTDDDGNCLVDGMVPEPLSQTSSGSVVKDVNASAAAAGTAEKXXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRRPTLRHELARADDMAREGARLSTSAPSVAKRRLKTTAALVAARAA--SVTIAGGRGFA-STAGDSLPAGTHRQRLRASSVGRQHSRSGQYQXXXXXXXXXX-AGVAEFDSPRDDQNPSVADAGGQAGQPEHPVDRSEDRAAGRRLHLGLRERQXXXXXXXXXXXXXXXXXNRLRRWDSLNSQQGNSSNEDNDDGMAARTTPVDGSDV------VGKTSNNDTSYIDDTRNRPTVLTDVIDETAQIVLSGDEREEPAVKPARQKVTAESLAQNPATPESATSQRRSTARRRSSSVEPRTEEHGTMPWRGGGVETVQTSAGGQEGGEGSLGNGSESRASAALESRFRRSXXRKSQENKGVRAAARGRRARDVLSIQKDLKKGMGGGTEAVAASNATPTATKSFEELALRTRGDGAAQAQEQTNSLADCGGDGDDHEDANKHAKSLQDSFHRTRDGGVEALGVQ----KINASYVDHRSEDEAGDADSSTKEFYGVLRRVEEL 4152
MTA APAWEDDY PASS+PS+VDQ QRTATA LD EENDLDLSKPTLAAAVIRDAER CLQQRERTSQAME ALAEV+KA RAAQA+TVRHQLRDLHD+E DGQDDRG+AWTPHTRVGHRNSWDRKAKVGRATGL RPP WAK FHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPP PVRRGT+VSAVLAAVAESPSSPPSTSSE+ GT+G++GPVLDDDWVVRKFAQIRRRSR IDSAIGDISGLHKQAQPS PVVDARKTSPN +PMRIGGMVTLEPLLQRDATA DAGSLSTDSG+ PHL GETLRPLPLASRE QGQHHDA DQ TVDD V + + QG+ LPPT+QDE ED LE PGNPFG AE Q WPHV PSPREGQHG SA PA CEQDRAP A RAT+EERL +EGKL +VSPEERALSLPSSSLVADDGSGEL PLGR ALWDARGP SAGGGRGTGL GRSGQG AGAEGGT+WSR XXXXXXXXXXXX E AKN+KE+RAKMVLEVLARSEHIFRCNAERRRRRSS N IGKRALEN ATKDGEE RAA APKSE RPYTSPASGGRQPAKVM AS V+AGNDNINSRGNDATT KDN SKPNL+NQS+N+RGGK SSF G D PDKHESPAGHGPTA GA EE K+E+RESG FVAAKRVAAR+RLERAEEEARKQ TS+ AR ASAPTSSGISSTRPSGLSLGS +GST LGVS PPAAGT+GS RDVLVRVRVPVAAQE TTAT GSTT P GG TPLPDTQ DDDGN LV+GMVPEPLSQTSSG+ K VNAS XXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRR TL+ EL +AD MAREGARLSTSA S+AKRRLKTTAA + AR A SVTIAGGRG A ++A D+LP+ THRQ LR +SVGRQH+R GQ XXXXXXXXXX +A DSP D++PS+A+AGGQAGQPEH V+RSEDRA GRR HLGLRER XXXXXXXXXXXXXXXX + LRRWDSL+SQQGNSSNEDNDDG+ ARTTP+DGSDV V KTS+NDT ++DDT R TV T VIDE AQIVLS ERE P +PA+Q VTAE LA NPAT E ATSQRRSTARRR +SVEPRTEEHG +PWRGG VET Q S GG+EGG G +GNGSESRAS ALESRFRRS RKSQEN GVRAAARGRR RDV+SIQK +KG+GGGTEAVAAS+ATPTA SFEELALR R +G QA Q +S DC GDGDD EDAN A+ L DS HRT +GGVEALGVQ + NA DH E +A DADSSTK+F VLRRVEEL
Sbjct: 1 MTATAPAWEDDYSPASSKPSIVDQGQRTATAVGLDPTNEENDLDLSKPTLAAAVIRDAERRCLQQRERTSQAMERALAEVIKAGRAAQAETVRHQLRDLHDNEKDGQDDRGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRGTIVSAVLAAVAESPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDISGLHKQAQPSVPVVDARKTSPNTHPMRIGGMVTLEPLLQRDATATDDAGSLSTDSGVFPHLTQSGETLRPLPLASRECQGQHHDAIDQTTVDDTVVAQADPQGSLLPPTNQDETGEDTQLEPPGNPFGAAENFQAWPHVLPSPREGQHGTSAPPAICEQDRAPVADRATREERLLEEGKLLEVSPEERALSLPSSSLVADDGSGELDPLGRRALWDARGPVSAGGGRGTGLRGRSGQGRGAGAEGGTVWSRRXXXXXXXXXXXX-EAAKNSKEKRAKMVLEVLARSEHIFRCNAERRRRRSSGNGIGKRALENVATKDGEEGRAATAPKSEARPYTSPASGGRQPAKVMVASAVSAGNDNINSRGNDATTCAHKDNSSKPNLKNQSANIRGGKSSSSFPGSDLRPDKHESPAGHGPTAGGARPGDEEAAKVERRESGAFVAAKRVAARRRLERAEEEARKQE-ETSKLEAR-ASAPTSSGISSTRPSGLSLGSTDGSTIPLGVSVPPAAGTNGSTRDVLVRVRVPVAAQEDTTATAGSTTLTPGGGGTPLPDTQVPDDDGNYLVNGMVPEPLSQTSSGNAAKGVNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRRSTLQRELEKADGMAREGARLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVAGASANDALPSATHRQGLRTTSVGRQHNRRGQQXXXXXXXXXXXXVRIAGVDSPGPDKDPSLAEAGGQAGQPEHSVERSEDRA-GRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNEDNDDGVGARTTPMDGSDVLDPPESVEKTSHNDTFHVDDTSYRLTVPTGVIDENAQIVLSDAEREGPTGRPAKQNVTAEPLAGNPATREPATSQRRSTARRRYNSVEPRTEEHGAIPWRGGEVETAQASGGGREGGVGIIGNGSESRASVALESRFRRSRRRKSQENMGVRAAARGRRERDVISIQKVYEKGIGGGTEAVAASDATPTAANSFEELALRRRDEGTPQAYVQLDSSVDCSGDGDDVEDANMRAEDLHDSLHRTLEGGVEALGVQTRGQESNAQCDDHTPEQKARDADSSTKDFCDVLRRVEEL 1394
BLAST of mRNA_E-fasciculatus_F_contig13.2275.1 vs. uniprot
Match: A0A6H5L5N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N1_9PHAE) HSP 1 Score: 1614 bits (4180), Expect = 0.000e+0 Identity = 1029/1438 (71.56%), Postives = 1123/1438 (78.09%), Query Frame = 1
Query: 1 MTAAAPAWEDDYFPASSQPSVVDQRQRTATAAELDANMEENDLDLSKPTLAAAVIRDAERLCLQQRERTSQAMETALAEVVKAERAAQADTVRHQLRDLHDDENDGQDDRGRAWTPHTRVGHRNSWDRKAKVGRATGLGRPPPWAKVFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPVPVRRGTMVSAVLAAVAESPSSPPSTSSEQKGTIGDAGPVLDDDWVVRKFAQIRRRSRSIDSAIGDISGLHKQAQPSTPVVDARKTSPNNNPMRIGGMVTLEPLLQRDATAASDAGSLSTDSGILPHLPHGGETLRPLPLASREDQGQHHDATDQATVDDIVAPEEELQGNRLPPTSQDEKYEDPPLESPGNPFGGAEYTQPWPHVRPSPREGQHGISAQPATCEQDRAPAARRATQEERLQQEGKLFDVSPEERALSLPSSSLVADDGSGELHPLGRSALWDARGPASAGGGRGTGLDGRSGQGGSAGAEGGTLWSRXXXXXXXXXXXXXREEAKNAKERRAKMVLEVLARSEHIFRCNAERRRRRSSVNDIGKRALENEATKDGEERRAAIAPKSETRPYTSPASGGRQPAKVMAASTVAAGNDNINSRGNDATTNTRKDNGSKPNLRNQSSNVRGGKLRSSFLGPDHHPDKHESPAGHGPTAAGAALVGEEGVKMEQRESGVFVAAKRVAARKRLERAEEEARKQV----------------------------------------PSTSRHVARPASAPTSSGISSTRPSGLSLGSPEGSTTILGVSTPPAAGTSGSNRDVLVRVRVPVAAQEATTATTGSTTGAPRGGDTPLPDTQGTDDDGNCLVDGMVPEPLSQTSSGSVVKDVNASAAAAGTAEKXXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRRPTLRHELARADDMAREGARLSTSAPSVAKRRLKTTAALVAARAA--SVTIAGGRGFA-STAGDSLPAGTHRQRLRASSVGRQHSRSGQYQXXXXXXXXXXA-GVAEFDSPRDDQNPSVADAGGQAGQPEHPVDRSEDRAAGRRLHLGLRERQXXXXXXXXXXXXXXXXXNRLRRWDSLNSQQGNSSNEDNDDGMAARTTPVDGSDV------VGKTSNNDTSYIDDTRNRPTVLTDVIDETAQIVLSGDEREEPAVKPARQKVTAESLAQNPATPESATSQRRSTARRRSSSVEPRTEEHGTMPWRGGGVETVQTSAGGQEGGEGSLGNGSESRASAALESRFRRSXXRKSQENKGVRAAARGRRARDVLSIQKDLKKGMGGGTEAVAASNATPTATKSFEELALRTRGDGAAQAQEQTNSLADCGGDGDDHEDANKHAKSLQDSFHRTRDGGVEALGVQ----KINASYVDHRSEDEAGDADSSTKEFYGVLRRVEEL 4152
M A APAWEDDY PASS+PS+VDQ QRTATAAELD EENDLDLSKPTLAAAVIRDAE CLQQRERTSQAME ALAEVVKAERAA+A+TVRHQLRDL D+ENDGQD RG+ WTPHTRVGHRNSW R+AKVGRATG R P WAK FHEMKRR SWASALE T+E EVPP LPEVPLEPPPVPVRRGT+VSAVLAAVAESPSSPPSTSSE+KG G++GPVLDDDWVVRKFAQIRRRSRSIDSAIGDISG HKQAQPS PVVDARK SPN +PMRIGGMVTLEPLLQRD T A DAGSLSTD G+LPHL GGETL PLP+ S+E QG+HHDA Q TVDDIVA + + QG+ LPPT+QDE ED PLE PG PF GAE Q WPHV PSPREGQHG SAQ A CE+DR P A+RAT EERLQQEGKLFDVSPEERALSLPSSSLVADDGSGEL+PLGRSALWDARGP SAGGGRGTGL GR GQGG+ GA+GGT+WSR XXXXXXXX REEAKNAKERRAKMVLEVLARSEHIFRCNAERRRRRS N IGKRALEN ATKDGEE RAA AP SE R YTSP GGRQPAKVMAAS VAAGND INSR NDATT+T+ DN SKPNL+NQS+N+RGG SS DH+ DK+ES AGHGP+A GA V +E K+EQRESG F+AAKRVAARKRLERAEEEARKQ TSR R ASAP S+GISSTRPS LSLGS + S T LGVS PPAAGTSGSNRDVLVRVRVPVAA+E TTATTGSTT AP GG TPLPDTQ DDDGN L +GMVPEPL QTSSG+ VK VNAS AA XXXXXXXXXXXXXXXXXXXX +SS LLEELER AHGSI +FKGWKHRDV DRRR T + E+ +AD +AREGA LSTSA S+AKRRLKTTAA + AR A SVTIAGGRG A ++A +LP+ TH+Q L +SSV RQH+R GQ XXXX A +A+ D P DQ+P VA+AGGQAGQP+ V+RSEDRA GRR HLGLRER XXXXXXXXXXXXXXXX + LRRWDSL+SQQGNSSNED DG+ ART+P+D SDV V KTS+ D +++DTRNR V DVIDETAQIVLS ERE PA +PA QKVT+E LA+NPA E TSQ+RSTARRR +SV RTEE+GT+PWR GGVETVQ S GG+EGG G +GNGSESRASAALESRFRRS RKSQEN GV+ A + D +KG+ GGTEAVAAS+ATPTA FEELAL R +GA QAQ +SL DC GDGDD EDA+ AK L S HRT +GG+ ALGVQ + NAS DH E +A DADSST F VL VEEL
Sbjct: 1 MAATAPAWEDDYSPASSKPSIVDQGQRTATAAELDPTNEENDLDLSKPTLAAAVIRDAEHRCLQQRERTSQAMERALAEVVKAERAAKAETVRHQLRDLQDNENDGQDHRGKDWTPHTRVGHRNSWARQAKVGRATGPIRSPAWAKDFHEMKRRASWASALEITMEYEVPPILPEVPLEPPPVPVRRGTIVSAVLAAVAESPSSPPSTSSERKGKTGNSGPVLDDDWVVRKFAQIRRRSRSIDSAIGDISGSHKQAQPSAPVVDARKISPNTHPMRIGGMVTLEPLLQRDTTDADDAGSLSTDRGVLPHLTQGGETLCPLPMTSKEYQGRHHDAIHQTTVDDIVAAQADPQGSLLPPTNQDETNEDAPLEPPGTPFVGAENFQAWPHVLPSPREGQHGTSAQAAICEEDRPPVAQRATHEERLQQEGKLFDVSPEERALSLPSSSLVADDGSGELNPLGRSALWDARGPVSAGGGRGTGLRGRCGQGGAVGAKGGTMWSRWRXXXXXXXXAA-REEAKNAKERRAKMVLEVLARSEHIFRCNAERRRRRSLGNGIGKRALENVATKDGEEGRAATAPTSEERAYTSPDYGGRQPAKVMAASAVAAGNDKINSRENDATTSTQGDNSSKPNLKNQSANIRGGNSSSSSPESDHYTDKYESAAGHGPSAGGARPVEKEAAKIEQRESGRFMAAKRVAARKRLERAEEEARKQAVLKEEASKLEARRAFEESLRTNFPKWSYSSMKKGGGVAKSDGTSRR--RRASAPASNGISSTRPSSLSLGSIDESATPLGVSAPPAAGTSGSNRDVLVRVRVPVAAKEDTTATTGSTTLAPSGGGTPLPDTQVPDDDGNDLFNGMVPEPLPQTSSGNTVKGVNASGAAXXXXXXXXXXXXXXXXXXXXXXXXXXAKSSSLLEELEREAHGSIVAFKGWKHRDVFDRRRSTFQQEMDKADGVAREGAGLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVARASANGALPSATHQQGLPSSSVRRQHNRHGQXXXXXXHQGEEDAVRIADVDFPGADQDPFVAEAGGQAGQPKRSVERSEDRA-GRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNEDTGDGVGARTSPMDDSDVQDPQESVEKTSHVDAFHVNDTRNRLMVPIDVIDETAQIVLSESEREGPAGRPATQKVTSEPLARNPARREPGTSQKRSTARRRYNSVGRRTEEYGTIPWREGGVETVQASGGGREGGAGIIGNGSESRASAALESRFRRSRRRKSQENMGVQLRA---------VEENDYEKGIDGGTEAVAASDATPTAANIFEELALIRRDEGAPQAQGHLDSLVDCSGDGDDDEDADMRAKDLHASMHRTLEGGLGALGVQTRGQESNASCDDHTPEHKARDADSSTTVFCDVLHSVEEL 1425 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13.2275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13.2275.1 >prot_E-fasciculatus_F_contig13.2275.1 ID=prot_E-fasciculatus_F_contig13.2275.1|Name=mRNA_E-fasciculatus_F_contig13.2275.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1384bp MTAAAPAWEDDYFPASSQPSVVDQRQRTATAAELDANMEENDLDLSKPTLback to top mRNA from alignment at E-fasciculatus_F_contig13:25957..34913- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13.2275.1 ID=mRNA_E-fasciculatus_F_contig13.2275.1|Name=mRNA_E-fasciculatus_F_contig13.2275.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8957bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13:25957..34913- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13:25957..34913- >mRNA_E-fasciculatus_F_contig13.2275.1 ID=mRNA_E-fasciculatus_F_contig13.2275.1|Name=mRNA_E-fasciculatus_F_contig13.2275.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=8304bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13:25957..34913- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |