prot_E-fasciculatus_F_contig1293.2222.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1293.2222.1
Unique Nameprot_E-fasciculatus_F_contig1293.2222.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length214
Homology
BLAST of mRNA_E-fasciculatus_F_contig1293.2222.1 vs. uniprot
Match: D8LUC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC2_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 7.250e-142
Identity = 207/213 (97.18%), Postives = 211/213 (99.06%), Query Frame = 0
Query:    1 MKFTAASVLVGLTTSQAFMVQPSMKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLSADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213
            MKFTAASVLVGLTTSQAFMVQP+MKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGAD ELGGGMSNYFAESDTYSPYSPYSKGDDALYK+ DQAFMTKVKID+LKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTL+ADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI
Sbjct:    1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADPELGGGMSNYFAESDTYSPYSPYSKGDDALYKSSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213          
BLAST of mRNA_E-fasciculatus_F_contig1293.2222.1 vs. uniprot
Match: A0A6H5KN94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN94_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 6.470e-95
Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 0
Query:    1 MKFTAASVLVGLTTSQAFMVQPSMKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 151
            MKFTAASVLVGLTTSQAFMVQP+MKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGD+ALYKT DQAFMTKVKID+LKDSQKRLQTVPGFIEGKKWEEIRSLLTAK
Sbjct:    1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDEALYKTSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 151          
BLAST of mRNA_E-fasciculatus_F_contig1293.2222.1 vs. uniprot
Match: K8Z7P0_NANGC (Extrinsic protein in photosystem II n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7P0_NANGC)

HSP 1 Score: 93.6 bits (231), Expect = 6.370e-20
Identity = 59/160 (36.88%), Postives = 92/160 (57.50%), Query Frame = 0
Query:   56 ALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLSADK--PQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213
            ALAK+G G KQ+ FG +G D       S +  +  TYSPYSPY  G++AL+K  + A   K+    + +S+KR+  +  ++E K+WEE+R+ LT + Y LR +   L+ +K  P+A+   K  ++DIE LTV +R+K       AY+ AQ     +L  +
Sbjct:   69 ALAKSGEGPKQSVFG-LGGDAA----SSPFVQDVPTYSPYSPYGTGENALFKPLN-ADDVKLYTSKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRSGQKLAENKQSPEASKALKSLFQDIEDLTVASRRKQVDVSQAAYSRAQADFDAFLKAL 222          
BLAST of mRNA_E-fasciculatus_F_contig1293.2222.1 vs. uniprot
Match: K0SUU3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUU3_THAOC)

HSP 1 Score: 81.6 bits (200), Expect = 1.730e-15
Identity = 58/173 (33.53%), Postives = 89/173 (51.45%), Query Frame = 0
Query:   46 VAATAAVAAPALAKAGTGAKQNW--FGVIGADQELGGGMSNYFAESDT-YSPYSPYSK--GDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLSADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213
            +AA AAV APA A A  G    +  FGVIG       G +    +S   YSPYS Y      DALY   +   + + K   + +SQKRL  +P ++E K+W  ++  LT   Y  R A+  L A+ P+   +AK F++ IE+ ++ A  KN   C  A  D+ + L ++++ +
Sbjct:   43 IAAAAAVIAPAAANAAAGESPRFSVFGVIGDGTSYSEGAAYGSDQSSAVYSPYSVYGNVGSSDALYSANNAGEVERKK-GFIAESQKRLSKLPAYVERKEWFNVKDELTRYMYETRGAVRGL-AETPEQKKIAKSFFQAIEEASLQATLKNQDKCAAASADSAKLLDQFVASL 213          
BLAST of mRNA_E-fasciculatus_F_contig1293.2222.1 vs. uniprot
Match: D5KXJ1_GALSU (Photosystem II extrinsic protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=D5KXJ1_GALSU)

HSP 1 Score: 54.3 bits (129), Expect = 2.070e-5
Identity = 45/162 (27.78%), Postives = 71/162 (43.83%), Query Frame = 0
Query:   56 ALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLSAD------KPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLS 211
            A AK+G  AK + FGV G        +                SKG   LYK  ++  +++     + D +  L  +PG+I  K WE+I+SL+  +   LR A   + A       + +A  +   F + IE +   ARQKNG    +A   A + L ++ S
Sbjct:   78 ASAKSGESAKLSIFGVEGLSSPFTADLK---------------SKGQP-LYKNLNEEEISRYT-KAITDGKASLSKIPGYINEKSWEDIKSLVRQRVADLRSAQKKMMASISEQRIRQKAEKLYDSFIKSIEDIDYAARQKNGDKVRQAQQQAMKLLQEWAS 222          
BLAST of mRNA_E-fasciculatus_F_contig1293.2222.1 vs. uniprot
Match: D6PTH0_GALSU (Photosystem II Q n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=D6PTH0_GALSU)

HSP 1 Score: 54.3 bits (129), Expect = 2.080e-5
Identity = 45/162 (27.78%), Postives = 71/162 (43.83%), Query Frame = 0
Query:   56 ALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLSAD------KPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLS 211
            A AK+G  AK + FGV G        +                SKG   LYK  ++  +++     + D +  L  +PG+I  K WE+I+SL+  +   LR A   + A       + +A  +   F + IE +   ARQKNG    +A   A + L ++ S
Sbjct:   79 ASAKSGESAKLSIFGVEGLSSPFTADLK---------------SKGQP-LYKNLNEEEISRYT-KAITDGKASLSKIPGYINEKSWEDIKSLVRQRVADLRSAQKKMMASISEQRIRQKAEKLYDSFIKSIEDIDYAARQKNGDKVRQAQQQAMKLLQEWAS 223          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1293.2222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LUC2_ECTSI7.250e-14297.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN94_9PHAE6.470e-9597.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8Z7P0_NANGC6.370e-2036.88Extrinsic protein in photosystem II n=3 Tax=Monodo... [more]
K0SUU3_THAOC1.730e-1533.53Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
D5KXJ1_GALSU2.070e-527.78Photosystem II extrinsic protein n=1 Tax=Galdieria... [more]
D6PTH0_GALSU2.080e-527.78Photosystem II Q n=1 Tax=Galdieria sulphuraria Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 102..213
e-value: 1.6E-20
score: 75.1
IPR023222PsbQ-like domain superfamilySUPERFAMILY101112Oxygen-evolving enhancer protein 3,coord: 118..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..213
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1293contigE-fasciculatus_F_contig1293:10918..14501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1293.2222.1mRNA_E-fasciculatus_F_contig1293.2222.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1293 10918..14501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1293.2222.1 ID=prot_E-fasciculatus_F_contig1293.2222.1|Name=mRNA_E-fasciculatus_F_contig1293.2222.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=214bp
MKFTAASVLVGLTTSQAFMVQPSMKTAGPDGGSSRADFAKLVTGTVAATA
AVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSK
GDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTA
KAYSLRDAMNTLSADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYN
DAQEHLTKYLSLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf