mRNA_E-fasciculatus_F_contig1293.2221.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: D8LUC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC2_ECTSI) HSP 1 Score: 370 bits (949), Expect = 3.780e-117 Identity = 207/295 (70.17%), Postives = 211/295 (71.53%), Query Frame = -1
Query: 2498 MKFTAASVLVGLTTSQAFMVQPSMKTAGP*VLSIFHSCKFRAAV*RLPFALHSCAAWASKCCCRAARHTMQTGEG*PLAHNPQALPAWICVFGSCIISPRMKTRARTGACRDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLSADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 3382
MKFTAASVLVGLTTSQAFMVQP+MKTAGP DGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGAD ELGGGMSNYFAESDTYSPYSPYSKGDDALYK+ DQAFMTKVKID+LKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTL+ADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI
Sbjct: 1 MKFTAASVLVGLTTSQAFMVQPTMKTAGP----------------------------------------------------------------------------------DGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADPELGGGMSNYFAESDTYSPYSPYSKGDDALYKSSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: A0A6H5KPX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX9_9PHAE) HSP 1 Score: 348 bits (892), Expect = 1.990e-108 Identity = 178/190 (93.68%), Postives = 181/190 (95.26%), Query Frame = 1
Query: 7 SASSPHPSSSTSAREQAKRKNEEGILAMKFQLVAAISAALCALTAAAPRADPKECEVCVNVLEQINESMPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 576
SASSP SSS RE+A RKNE+GILAMKFQLVAAISA LCALTAAAPRADPKECEVCVNVLEQI+ESMPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPK KVCQRLK SNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL
Sbjct: 52 SASSPQASSSNRDREKATRKNEDGILAMKFQLVAAISAVLCALTAAAPRADPKECEVCVNVLEQISESMPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKSKVCQRLKASNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 241
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: D8LUC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC3_ECTSI) HSP 1 Score: 250 bits (638), Expect = 5.100e-74 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 1
Query: 211 MPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 576
MPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLK SNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL
Sbjct: 1 MPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKASNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 122
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: A0A6H5KN94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN94_9PHAE) HSP 1 Score: 249 bits (636), Expect = 2.840e-73 Identity = 147/233 (63.09%), Postives = 150/233 (64.38%), Query Frame = -1
Query: 2684 MKFTAASVLVGLTTSQAFMVQPSMKTAGP*VLSIFHSCKFRAAV*RLPFALHSCAAWASKCCCRAARHTMQTGEG*PLAHNPQALPAWICVFGSCIISPRMKTRARTGACRDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDDALYKTGDQAFMTKVKIDVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 3382
MKFTAASVLVGLTTSQAFMVQP+MKTAGP DGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGD+ALYKT DQAFMTKVKID+LKDSQKRLQTVPGFIEGKKWEEIRSLLTAK
Sbjct: 1 MKFTAASVLVGLTTSQAFMVQPTMKTAGP----------------------------------------------------------------------------------DGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDEALYKTSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 151
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: A0A836CA80_9STRA (Armet protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA80_9STRA) HSP 1 Score: 205 bits (521), Expect = 2.490e-57 Identity = 96/149 (64.43%), Postives = 119/149 (79.87%), Query Frame = 1
Query: 130 ALTAAAPRADPKECEVCVNVLEQINESMPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 576
A AAP A+PKECEVC++VLE++ + AAD KNKDKIE AI+ +C Q+L ++DDKMCY + IKK +S PFS G+PKLKVCQRLK NA++C ++YPIKVDK N+DYN LRVK LK ILA+RG CDGC+EKSDYV RCK TE++EL
Sbjct: 16 AAVGAAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: A0A7S2Y4H6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4H6_9STRA) HSP 1 Score: 198 bits (503), Expect = 7.080e-55 Identity = 100/160 (62.50%), Postives = 125/160 (78.12%), Query Frame = 1
Query: 100 LVAAISAALCALTAAAPRADPKECEVCVNVLEQINESMPAADRKNKDKIEAAIDAFCDQR-LSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 576
L+ AIS + L+ AA DPK CEVC+NVLEQI+ +M AD+KNK KIEAAIDAFCDQ+ L+++D KMCYY PIK+ +S PFSTGMPK KVCQRL N ++C +KYP+KV+K+ DY+KLRVK LK ILA+RGV+C GCLEK DYV RC+ T H++L
Sbjct: 9 LILAISFVIATLSRAAD--DPKACEVCINVLEQIDATMDKADKKNKPKIEAAIDAFCDQKMLNAKDKKMCYYLDPIKRAVSQPFSTGMPKNKVCQRLTKDNPDICAVKYPMKVEKDT-DYSKLRVKALKQILAERGVECTGCLEKPDYVKRCEETAHMDL 165
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: A0A4D9D3E5_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3E5_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.870e-42 Identity = 88/162 (54.32%), Postives = 119/162 (73.46%), Query Frame = 1
Query: 88 MKFQLVAAISAALCALTAAAPRADPKECEVCVNVLEQINESMPAADRKNKDKIEAAIDAFCDQR-LSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHL 570
+ LVAA+ AAL L A +DPK+CEVC+ VLE+I+ M A +KNK +E AIDA+C ++ + +++ K+CY+ PIK+ +S PFSTGMPK KVC RLK +AE+C IKYP+KVD + DY KLRVK+LK ILA+RGV+C GCLEK D++ +C+ T HL
Sbjct: 5 LSLGLVAAL-AALLGLANLAHASDPKDCEVCIGVLEKIDAGMEAKAKKNKLAVEDAIDAYCSRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCARLKKKSAEICGIKYPVKVDSQT-DYTKLRVKELKAILAERGVECTGCLEKPDFIKKCEETAHL 164
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: A0A7S0XC71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XC71_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.040e-42 Identity = 83/161 (51.55%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 139 AAAPRADPKECEVCVNVLEQINESMPAADRKNKDKIEAAIDAFCD------------QRLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDK---ENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 576
A AP DP++CEVC+ LE +++ +PA + +K IE AI C + S +D KMCY F PIKK+IS PF+TGMPK KVCQRL+ N E+CE+KYP+KV+K E DYNKL+VKQLK IL++RGV C GC EK ++V +C+ TEHLE+
Sbjct: 24 AKAPTKDPRDCEVCIANLEAVDKLLPADKKSDKAAIEKAIGKRCTLSGFGSEWKPNPELTSPKDVKMCYLFEPIKKSISTPFATGMPKAKVCQRLQKDNPEICEVKYPLKVEKKEGEATDYNKLKVKQLKEILSNRGVTCTGCTEKPEFVKKCQETEHLEM 184
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: B8BWT8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWT8_THAPS) HSP 1 Score: 160 bits (405), Expect = 1.230e-41 Identity = 77/161 (47.83%), Postives = 114/161 (70.81%), Query Frame = 1
Query: 94 FQLVAAISAALCALTAAAPRADPKECEVCVNVLEQINESMPAADRKNKDKIEAAIDAFCDQ-RLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDK-ENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHL 570
+ ++ +SAAL A ++ +DP+ECEVC+ V++ + ++MP D+K+K KIE AI A C + LS+R+ K+CYY PIK+ ++ PFS GM KVC+R+ +N E+C +K+P+K + E D KLRVKQLK IL DRGV+C GC+EK +++AR + TEHL
Sbjct: 1 MRAISILSAALLAASSVNAASDPRECEVCMKVMQDVRDAMPKEDQKDKPKIEQAIGAHCKKDTLSARERKICYYIDPIKRDVAQPFSLGMTVEKVCKRIDKTNPEICSVKFPVKTENLEKKDLTKLRVKQLKSILLDRGVECKGCVEKEEFIARVQETEHL 161
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Match: A0A6U3WLY9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3WLY9_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.430e-41 Identity = 77/163 (47.24%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 88 MKFQLVAAISAALCALTAAAPRADPKECEVCVNVLEQINESMPAADRKNKDKIEAAIDAFCDQ-RLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKTSNAEVCEIKYPIKVDK-ENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHL 570
MK + A +A + A + +A DP+ECEVC+ V++ + +++P AD+ NK IEAA+ A C + LS+R+ K+CYY PIK+ ++HPFS GMP ++C+R+ SN+E+C +K+P+K + E D KLRVKQLK IL DRGV+C GC+EK +++A + TEHL
Sbjct: 1 MKSVSIIAAAAVMLASSVSAASNDPRECEVCMKVMQDVRDAIPKADQTNKPAIEAALGAQCAKDTLSARERKICYYIDPIKRDVAHPFSLGMPVDRLCKRINKSNSEICGVKFPVKTENLEKKDLTKLRVKQLKSILVDRGVECKGCVEKEEFIAMVQNTEHL 163 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1293.2221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1293.2221.1 >prot_E-fasciculatus_F_contig1293.2221.1 ID=prot_E-fasciculatus_F_contig1293.2221.1|Name=mRNA_E-fasciculatus_F_contig1293.2221.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp MKFQLVAAISAALCALTAAAPRADPKECEVCVNVLEQINESMPAADRKNKback to top mRNA from alignment at E-fasciculatus_F_contig1293:5599..14501+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1293.2221.1 ID=mRNA_E-fasciculatus_F_contig1293.2221.1|Name=mRNA_E-fasciculatus_F_contig1293.2221.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8903bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1293:5599..14501+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1293:5599..14501+ >mRNA_E-fasciculatus_F_contig1293.2221.1 ID=mRNA_E-fasciculatus_F_contig1293.2221.1|Name=mRNA_E-fasciculatus_F_contig1293.2221.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1293:5599..14501+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |