prot_E-fasciculatus_F_contig12905.2199.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12905.2199.1
Unique Nameprot_E-fasciculatus_F_contig12905.2199.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length162
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12905.2199.1 vs. uniprot
Match: D7FQC7_ECTSI (Protein tyrosine phosphatase, receptor type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC7_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 5.420e-86
Identity = 149/159 (93.71%), Postives = 153/159 (96.23%), Query Frame = 0 
Query:    3 SLGATRKGGRARGGXXXXARWATAAEKSRTREGGHVGRPSTTAMVVQGGSWTDGGGEFVGERTVASHVLQDSFRSMRRKEKGGVLEYDRTKSRCRMLRLEVIWSTVSSEEAKEFLLPRGSIVERNQGRLSQFETFRALWAQDERRKSVREEWALLSGVL 161
            + GATRKGGRARGGXX  ARWAT AEKSRTR+GGHVGRP TTAMVVQGGSWTDGGGEFVGERTVASHVLQDSFRSMRRK+KGGVLEYDRTKSRCR+LRLEVIWSTVSSEEAK FLLPRGSIVERNQGRLSQFETFRALWAQDERRKSVREEWALLSGVL
Sbjct: 1709 ATGATRKGGRARGGXXGGARWATPAEKSRTRQGGHVGRPPTTAMVVQGGSWTDGGGEFVGERTVASHVLQDSFRSMRRKDKGGVLEYDRTKSRCRVLRLEVIWSTVSSEEAKGFLLPRGSIVERNQGRLSQFETFRALWAQDERRKSVREEWALLSGVL 1867
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12905.2199.1 vs. uniprot
Match: A0A7S2G9T5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9T5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.650e-13
Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 0 
Query:   58 GEFVGERTVASHVLQDSFRSMRRKEKGGVLEYDRTKSRCRMLRLEVIWSTVSSEEAKEFLLPRGSIVERNQGRLSQFETFRALWAQDERRKSVREE 153
            G +VGERT+A+ VL+D +RS R   + GV +     SR RMLRLEVIWSTVS+EEA + +L R +I++ ++ ++ +FETFR  WA++E R    EE
Sbjct: 1577 GRYVGERTIAASVLKDIYRSPRHTIEVGVAK---PISR-RMLRLEVIWSTVSTEEACDHVLRRDAIIQMDEEQIFEFETFRVPWAEEEARLPEYEE 1668
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12905.2199.1 vs. uniprot
Match: A0A7S0SYB2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SYB2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 7.660e-10
Identity = 38/104 (36.54%), Postives = 63/104 (60.58%), Query Frame = 0 
Query:   59 EFVGERTVASHVLQDSFRSMRRKEKGGVLEYDR-----TKSRCRMLRLEVIWSTVSSEEAKEFLLPRGSIVERNQGRLSQFETFRALWAQDERRKSVREEWALL 157
            E++GERT+A+H+++D+++++R       L  DR     + S  R++ LEVIW   S   A++F    G I+ER    L +FE +R LW Q+++R  + +EW LL
Sbjct:  214 EYLGERTIAAHIVKDNYKTVR----DTCLATDRPINSISSSNYRIVWLEVIW-VQSKLNAEQFKYKTGEIIERKLKNLQEFEIYRCLWYQEKQRMRLEDEWELL 312
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12905.2199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQC7_ECTSI5.420e-8693.71Protein tyrosine phosphatase, receptor type n=1 Ta... [more]
A0A7S2G9T5_9STRA1.650e-1348.96Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0SYB2_9STRA7.660e-1036.54Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12905contigE-fasciculatus_F_contig12905:962..2542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12905.2199.1mRNA_E-fasciculatus_F_contig12905.2199.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12905 698..3331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12905.2199.1 ID=prot_E-fasciculatus_F_contig12905.2199.1|Name=mRNA_E-fasciculatus_F_contig12905.2199.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=162bp
MASLGATRKGGRARGGGGGGARWATAAEKSRTREGGHVGRPSTTAMVVQG
GSWTDGGGEFVGERTVASHVLQDSFRSMRRKEKGGVLEYDRTKSRCRMLR
LEVIWSTVSSEEAKEFLLPRGSIVERNQGRLSQFETFRALWAQDERRKSV
REEWALLSGVL*
back to top