mRNA_E-fasciculatus_F_contig1290.2192.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.020e-26 Identity = 74/193 (38.34%), Postives = 100/193 (51.81%), Query Frame = 1
Query: 7 DFSIVKLASNGSFQWQWQDGAGSNEDSWGI-DLDPADGS-VVVAGQTSGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQNGTVGGISKIFAAAAVEDGVVLAGSTNGEWSGVDSAFGEEDFAAVKLN 579
D + VKL +G+ W+WQ G +E GI + A GS VV+ G+T G+W N G DF A KLD++G LW WQ+ T A D +AV +D +GSV LAGYTE NQ + F KLD+ G WRWQ+GT + + GV LAG + G + G++ G E F VK++
Sbjct: 283 DLAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASN-----VGGYDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGD-------WNQPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINK--GSEGFVVVKID 461
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: A0A6H5JZC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC7_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 8.530e-21 Identity = 60/145 (41.38%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 7 DFSIVKLASNGSFQWQWQDGAGSNEDSWGI-DLDPADGS-VVVAGQTSGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQ 435
DF+ VKL +G+ W+WQ G +E GI + A GS VV+ G+T G+W N G DF A KLD++G LW WQ+ T A D +AV +D +GSV LAGYTE NQ + F KL++ G WRWQ
Sbjct: 105 DFAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASN-----AGGYDFCAAKLDADGNELWSWQDGTGADDTTKAVAVDGDGSVFLAGYTEGD-------WNQPNEGETDFAVTKLEANGTLAWRWQ 237
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 6.930e-20 Identity = 63/159 (39.62%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 112 DGSVVVAGQTSGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTI-DVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDS-GGNELWRWQNGTVGGISKIFAAAAVEDGVVLAGSTNGEWSGVDSAFGEEDFAAVKLNT 582
DGSV+ GQT G+W +G+ A G +DFAAF+LD G +W++Q+ T D++ A + D + SVV+AG T + +++ A V KL++ G E+WR+Q+GT A A ++G+V+AGST+G WSG ++ G +DFAAVKL++
Sbjct: 112 DGSVICVGQTYGSW-DGD----ANGDSDFAAFRLDGNGEEIWRYQDGTEEEDLMTAAAMGDGDSSVVMAGQT------YVNFSGASNSGSADIVVVKLNATSGTEIWRYQDGTSVYDKLGLIAVAEDNGIVVAGSTDGIWSGENA--GLDDFAAVKLSS 257
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.890e-17 Identity = 61/178 (34.27%), Postives = 89/178 (50.00%), Query Frame = 1
Query: 49 WQWQDGAGSNEDS-WGIDLDPADGSVVVAGQTSGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQNGTVGGISKIFAAAAVEDGVVLAGSTNGEWSGVDSAFGEEDFAAVKLN 579
W++Q G+ ++D+ +G+ D A+GS +AG+T+G+ +G D A KLDS+G+LLW WQE TT D + +G VV+ GY+ V G + F+A K DS G E WRWQ GT + + VVL G T G+W ++ AVKL+
Sbjct: 9 WRFQAGSSYDDDAVYGVSTD-AEGSFFLAGKTTGSLDGITLNAGGE---DMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGD------FIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWA--LVAVKLD 174
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.600e-15 Identity = 63/168 (37.50%), Postives = 84/168 (50.00%), Query Frame = 1
Query: 88 WGIDLDPADGSVVVAGQTSGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQNGTVGGISKIFAAAAVEDGVVLAGSTNGEWSGVDSAFGEEDFAAVKLN-TDG 588
+G+ D A+GS +AG T G+ +G T D AA KLDS+G +LW WQE +T D L +G VV AG+ + V G + F A K DS G E WRWQ+GT + + + VVL G T G+W V++ G AVKL+ TDG
Sbjct: 26 YGVSAD-AEGSFFLAGTTEGSLDGITFNAGGT---DMAAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGD------FFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDW--VETNTGLWALVAVKLDVTDG 181
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 5.530e-14 Identity = 53/131 (40.46%), Postives = 69/131 (52.67%), Query Frame = 1
Query: 199 AAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQNGTVGGISKIFAAAAVEDGVVLAGSTNGEWSGVDSAFGEEDFAAVKLN-TDG 588
AA KLDS+G +LW WQE TT D L +G VV AG+ F+ + V ++ F+A K DS G E WRWQ+GT + + VVL GST G+W V++ G AVKL+ TDG
Sbjct: 2 AAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGF---FNGTLNGVASEG---LGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDW--VETNTGLWALVAVKLDVTDG 124
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: A0A847LSU1_9SPIR (Uncharacterized protein n=1 Tax=Treponema sp. TaxID=166 RepID=A0A847LSU1_9SPIR) HSP 1 Score: 65.9 bits (159), Expect = 2.850e-9 Identity = 59/175 (33.71%), Postives = 85/175 (48.57%), Query Frame = 1
Query: 49 WQWQDGAGSNEDSWGIDLDPADGSVVVAGQTSGTWGNGNETSGA-TGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAF--KLDSGGNELWRWQNGTVGGISKIFAAAAVEDG--VVLAGSTNGEWSGVDSAFGEED 558
WQ+ G ++ +D A G+++VAG T G+ SG+ G +D K D +G LW Q T D RA+ +D G++++AG TE G + + Y+ F K + GNELW Q GT G A AV+ G +++AGST G SG S+ G ED
Sbjct: 150 WQFGTAEGDYANALAVD---AGGNIIVAGYTFGS------LSGSFAGESDAFVQKHDPKGNELWTRQFGTAEYDYARALAVDTEGNIIVAGGTE---------GKLSGSSAGYYDVFVRKYNPKGNELWTRQFGT--GSDDWATALAVDTGGNIIVAGSTIGSLSG--SSSGRED 302
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: A0A2U1ZV34_9MICO (Acyl-CoA:diacylglycerol acyltransferase n=1 Tax=Serinibacter arcticus TaxID=1655435 RepID=A0A2U1ZV34_9MICO) HSP 1 Score: 63.2 bits (152), Expect = 3.260e-8 Identity = 58/196 (29.59%), Postives = 79/196 (40.31%), Query Frame = 1
Query: 1 DVDFSIVKLASNGSFQWQWQDGAGSNEDSWGIDLDPADGSVVVAGQTSGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQNGTVGGISKIFAAAAVEDGVVLAGSTNGEWSGVDSAFGEEDFAAVKLNTDG 588
D D ++V + +G W G + ++ + ADG+VVVAG T+G G G D G+ LW Q T +D L+A+ +G VV AGY G + VA L SGG LW Q GT G + GVVL G ++G W D G D + L+ G
Sbjct: 483 DKDAALVHVDGDGEVVWTAGVGGAGEDKAYAVTT-AADGTVVVAGSTTGAMPGGTPAGGL----DAWVAGFSPAGVRLWLHQIGTDGSDQLQALVRTPDG-VVAAGYAGGALPGATSAGASD------LVAIALTSGGETLWTRQVGTAGDDRGAALVPGADGGVVLIGHSDGAW---DVPAGGVDVVVLPLSASG 663
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: A0A5B9FNI0_9FLAO (T9SS type A sorting domain-containing protein n=1 Tax=Flavobacterium alkalisoli TaxID=2602769 RepID=A0A5B9FNI0_9FLAO) HSP 1 Score: 62.8 bits (151), Expect = 4.000e-8 Identity = 56/194 (28.87%), Postives = 98/194 (50.52%), Query Frame = 1
Query: 7 DFSIVKLASNGSFQWQWQDGAGSNEDSWGIDLDPADGSVVVAGQT-SGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTATDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQNGTVGG--ISKIFAAAAVEDGVVLAGSTNGEWS-GVDSAFGEEDFAAVKL 576
D+ ++KL +G+ +W+ G G ++D L D ++ G + S + GN N+ S GT D K+D EG +LW+ TD+L ++ + +G+ +L G+ + EVF + + + +VA K+ S G ELW+ G+ G + K+ + G ++AG+++G S +S G DF VK
Sbjct: 260 DYWVLKLDVDGNTEWEKVFG-GDDDDHLSCILPIKDDGYLLGGYSASSSTGNKNK-SNKKGT-DIWLIKIDQEGDILWQETYDIGKTDILLSLLENKDGTYLLGGHAKS---EVFGLKKSDKKEINDYVAIKVSSDGEELWKKAIGSKGEDVLQKLIETR--DGGYIMAGTSDGAISRDKNSGNGSHDFWVVKF 445
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Match: D8LRF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF0_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 4.110e-8 Identity = 43/109 (39.45%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 112 DGSVVVAGQTSGTWGNGNETSGATGTADFAAFKLDSEGLLLWKWQESTTA-TDVLRAVTIDVNGSVVLAGYTEEFDDEVFDVGNQNDTQPAYFVAFKLDSGGNELWRWQ 435
D SVV+AG T E G G FAA +LDSEG+ LW+W++S T VT+ +GSVV AGY D +G + F+A+KL G LW+WQ
Sbjct: 23 DESVVLAGST--------EIDGEDG---FAALELDSEGVELWRWEDSPGGGTCRTYGVTVSDDGSVVGAGYIWSGDWATPSLGETD------FIAYKLAKDGTLLWKWQ 114 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1290.2192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1290.2192.1 >prot_E-fasciculatus_F_contig1290.2192.1 ID=prot_E-fasciculatus_F_contig1290.2192.1|Name=mRNA_E-fasciculatus_F_contig1290.2192.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=196bp DVDFSIVKLASNGSFQWQWQDGAGSNEDSWGIDLDPADGSVVVAGQTSGTback to top mRNA from alignment at E-fasciculatus_F_contig1290:8231..10195- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1290.2192.1 ID=mRNA_E-fasciculatus_F_contig1290.2192.1|Name=mRNA_E-fasciculatus_F_contig1290.2192.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1965bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1290:8231..10195- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1290:8231..10195- >mRNA_E-fasciculatus_F_contig1290.2192.1 ID=mRNA_E-fasciculatus_F_contig1290.2192.1|Name=mRNA_E-fasciculatus_F_contig1290.2192.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1176bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1290:8231..10195- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |