prot_E-fasciculatus_F_contig12866.2160.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig12866.2160.1
Unique Name	prot_E-fasciculatus_F_contig12866.2160.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	648

Homology

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BLAST of mRNA_E-fasciculatus_F_contig12866.2160.1 vs. uniprot
Match: A0A6H5KBF0_9PHAE (Raptor_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF0_9PHAE)

HSP 1 Score: 639 bits (1648), Expect = 1.970e-205
Identity = 502/648 (77.47%), Postives = 518/648 (79.94%), Query Frame = 0

Query:    1 QRSSDPSLRDPSVRMWLCLCLAKLCWQYTEAQDACVRLDIQGSLFACLERKVETVEVRCAAVYALGSLYSREITANSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------ARIGAVLPPGLGGVAQGGGVGTPMIXXXXXXXXXXIIGQQEGGPGQRQGAPMMGVGGQASAGPGSADRGGGQRGGMDAWLSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTIAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGCRADGGDSNVSPQRQSXXXXXXXXXXXXXGLAGRLSTSPPVGSSRWVLPSPRLSSSVNSGSGLALGGIGGRGGGWRRGDANCGDAGGGGTADGSMPQQ------------QWRVRAEDANSVARGLVHGKIGAIGWGE--GGADKGQQXXXXXXXATPNLSEGVLQSVGVEAAQHYATLWTVLEEVRDVDPFPHVVDAAEAVIVPVAEQLEALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHEDPKTPPLSTPTSPLSPPLSAVAAGEVLLGSSADTRVSASSWS 617
            QRSSDPSLR PSVRMWLCLCLAKLCWQYT+AQDACVRLDIQGSLFACLERKVETVEVRCAAVYALGSLYSREI A+ EA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       ARIGAVLPPGLG VAQGGGVGTPM XXXXXXXXXXI+G+Q+GGPGQRQGA MMGVGGQASAGPGS + GGG +GGMDAW SLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVT+AQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXX      S CRA+ GDSNVSPQRQS             GLAG LS SP + SSRWV PSPRLSSSVN+ +G ALGGIG  GGGWR  DANCGDAGG GT DGS   Q            QWR RAEDANSVARGLV GKIG   WGE  G AD+ QQ       AT NLSEGVLQSVG EAA HYA LWTVLEEVRD+DPFPHVVDAAEAVI PVAEQLEALAA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 HEDPKTPPLSTPTSPLSPPLSAVA+ EV+LGSSADTRVSASSWS
Sbjct:  868 QRSSDPSLRHPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFACLERKVETVEVRCAAVYALGSLYSREIIAHPEAGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGVREGGPFQPAAPPPGQQQQQARIGAVLPPGLGRVAQGGGVGTPMFXXXXXXXXXXIVGRQDGGPGQRQGAQMMGVGGQASAGPGSTNGGGGHKGGMDAWPSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXS----QSSCRAECGDSNVSPQRQSWNRGSAVAGGG--GLAGHLSKSPALRSSRWVPPSPRLSSSVNNSNGFALGGIGSHGGGWRGADANCGDAGGSGTTDGSTQHQHXXXXXXXXXXXQWRGRAEDANSVARGLVPGKIG---WGESVGCADREQQQ------ATLNLSEGVLQSVGAEAAHHYAALWTVLEEVRDMDPFPHVVDAAEAVIAPVAEQLEALAAARGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------AHEDPKTPPLSTPTSPLSPPLSAVASREVVLGSSADTRVSASSWS 1484

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BLAST of mRNA_E-fasciculatus_F_contig12866.2160.1 vs. uniprot
Match: D7FIL6_ECTSI (Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL6_ECTSI)

HSP 1 Score: 417 bits (1072), Expect = 5.010e-131
Identity = 293/486 (60.29%), Postives = 303/486 (62.35%), Query Frame = 0

Query:    3 SSDPSLRDPSVRMWLCLCLAKLCWQYTEAQDACVRLDIQGSLFACLERKVETVEVRCAAVYALGSLYSREITANSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARIGAVLPPGLGGVAQGGGVGTPMIXXXXXXXXXXIIGQQEGGPGQRQGAPMMGVGGQASAGPGSADRGGGQRGGMDAWLSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTIAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGCRADGGDSNVSPQRQSXXXXXXXXXXXXXGLAGRLSTSPPVGSSRWVLPSPRLSSSVNSGSGLALGGIGGRGGGWRRGDANCGDAGGGGTADGSMPQQ---QWRVRAEDANSVARGLVHGKIGAIGWGEGG---ADKGQQXXXXXXXATPNLSEGVLQSVGVEAAQHYA 482
            SSDPSLRDPSVRMWLCLCLAKLCWQYT+AQDACVRLDIQGSLFACLERK                                                                                                                        +GGPGQRQGAPMMGVGGQASAGPGS D GGGQRGGMDAW SLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALG+LVLNPAHFPFFVT+AQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXXX    S CRA+ G+SNVSPQRQS             GLAGRLSTSPP+ SSRWVLPSPRLSSSVNS SG+ALGGIG  GGGWR GDANC DAG               QWR RAED NSVARGLV GKIG   WG G    AD+ QQ       ATPNL+EGVLQSVG EAAQHYA
Sbjct:  573 SSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFACLERK------------------------------------------------------------------------------------------------------------------------DGGPGQRQGAPMMGVGGQASAGPGSTDGGGGQRGGMDAWPSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGLLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXS--QSSCRAECGESNVSPQRQSGSRGSAVAGGG--GLAGRLSTSPPLRSSRWVLPSPRLSSSVNSSSGVALGGIGSHGGGWRGGDANCSDAGXXXXXXXXXXXXXXXQWRARAEDVNSVARGLVPGKIG---WGGGSVVCADREQQQ------ATPNLNEGVLQSVGAEAAQHYA 925

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig12866.2160.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig12866.2160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KBF0_9PHAE	1.970e-205	77.47	Raptor_N domain-containing protein n=1 Tax=Ectocar...	[more]
D7FIL6_ECTSI	5.010e-131	60.29	Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 R...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 282..302
None	No IPR available	COILS	Coil	Coil	coord: 515..535
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 16..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..648
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 27..31
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..31 score: 0.623
IPR004083	Regulatory associated protein of TOR	PANTHER	PTHR12848	Regulatory-associated protein of mTOR	coord: 10..591
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 9..272

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig12866	contig	E-fasciculatus_F_contig12866:510..3650 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig12866.2160.1	mRNA_E-fasciculatus_F_contig12866.2160.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig12866 508..3650 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig12866.2160.1 ID=prot_E-fasciculatus_F_contig12866.2160.1|Name=mRNA_E-fasciculatus_F_contig12866.2160.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=648bp
QRSSDPSLRDPSVRMWLCLCLAKLCWQYTEAQDACVRLDIQGSLFACLER
KVETVEVRCAAVYALGSLYSREITANSEAAAVAAAARGAGAAAAAAAAAA
GATPGAEAAGGREGGPFQPAAPPPGQQQQQQARIGAVLPPGLGGVAQGGG
VGTPMIPMMPMTPMVPIIGQQEGGPGQRQGAPMMGVGGQASAGPGSADRG
GGQRGGMDAWLSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASP
LLRREVVLALGVLVLNPAHFPFFVTIAQELAINRAAAAAAAAAARKEAAR
RKGGKGSSSNGGGGSQSSGCRADGGDSNVSPQRQSGSRGSAVIGGGGGGL
AGRLSTSPPVGSSRWVLPSPRLSSSVNSGSGLALGGIGGRGGGWRRGDAN
CGDAGGGGTADGSMPQQQWRVRAEDANSVARGLVHGKIGAIGWGEGGADK
GQQQQQQQQQATPNLSEGVLQSVGVEAAQHYATLWTVLEEVRDVDPFPHV
VDAAEAVIVPVAEQLEALAAARRAAAAAARAAEEDGARGKPVRKGSTASS
GGGGSGGGASSRRNGGGGGAGGTHEDPKTPPLSTPTSPLSPPLSAVAAGE
VLLGSSADTRVSASSWSSSSPVVPDVVDLVAPAKKQQQQQQVQQQGGA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR004083	Raptor