prot_E-fasciculatus_F_contig12801.2121.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12801.2121.1
Unique Nameprot_E-fasciculatus_F_contig12801.2121.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length256
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12801.2121.1 vs. uniprot
Match: D7FLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ4_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 8.060e-76
Identity = 140/200 (70.00%), Postives = 145/200 (72.50%), Query Frame = 0 
Query:    1 AAARCRRKRXXXXXXXXXXXXAARVTGLASCRHP---RPPCTPLLIMXXXXXXXXXXXXXXXXXSGRGSDSSVPWWYPSRDWGLPSDAAAGSGXXXEAGGSGGWTGLGVPRRRFREEAKLAEEFVASWVASGLAEDEERRGGDVMMPACDVLEAGNHTLRRLGASVDRCASPYYTLPEIHPSQLVYTEVDPAEAAEKRER 197
            AAARCRRKR            A   T +AS RHP     P  PLL+                    RGS+SSVPWWYPSRDWGLPSDA  GSGXXX       WTGLGVPRRRFREEAKLAEEFVASWVASGLAE+EERRGG V+MPACDVLEAGNHTLRRLGASVDRCASPYY LPEIHPSQLVYTEVDPAEAAEKRER
Sbjct:   18 AAARCRRKRSRKRIPTT----APPPTAVASWRHPPLDALPRNPLLVALVVVALLGSVADAGGGSGNRGSESSVPWWYPSRDWGLPSDAV-GSGXXXXX-XXXXWTGLGVPRRRFREEAKLAEEFVASWVASGLAEEEERRGGSVVMPACDVLEAGNHTLRRLGASVDRCASPYYALPEIHPSQLVYTEVDPAEAAEKRER 211
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BLAST of mRNA_E-fasciculatus_F_contig12801.2121.1 vs. uniprot
Match: A0A6H5K6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Z1_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 9.510e-73
Identity = 135/201 (67.16%), Postives = 143/201 (71.14%), Query Frame = 0 
Query:    1 AAARCRRKRXXXXXXXXXXXXAARVTGLASCRHP---RPPCTPLLIMXXXXXXXXXXXXXXXXXSGRGSDSSVPWWYPSRDWGLPSDAAAGSGXXXEAGGSGGWTGLGVPRRRFREEAKLAEEFVASWVASGLAEDEERRGGDVMMPACDVLEAGNHTLRRLGASVDRCASPYYTLPEIHPSQLVYTEVDPAEAAEKRERE 198
            A ARCRRKR                T +AS RHP     P +PLL+                    RG DSSVPWWYPSRDWGLPSDA  GSGXXX       WTGLGVPRRRFREEAKLAE+ VASWVASGLAE+EER+GG ++MP CDVLEAGNHTLRRLGASVDRCASPYYTLPEIHPSQLVYTEVDPAEAAEKRERE
Sbjct:   13 ATARCRRKRSRKRIPTT----VVTTTAVASWRHPPLDALPRSPLLVGVVVVALLGSVADAVGGSGRRGGDSSVPWWYPSRDWGLPSDAV-GSGXXXXX-XXXXWTGLGVPRRRFREEAKLAEDSVASWVASGLAEEEERQGGSMVMPTCDVLEAGNHTLRRLGASVDRCASPYYTLPEIHPSQLVYTEVDPAEAAEKRERE 207
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12801.2121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLZ4_ECTSI8.060e-7670.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6Z1_9PHAE9.510e-7367.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..57
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 41..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 53..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12801contigE-fasciculatus_F_contig12801:228..3414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12801.2121.1mRNA_E-fasciculatus_F_contig12801.2121.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12801 228..3414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12801.2121.1 ID=prot_E-fasciculatus_F_contig12801.2121.1|Name=mRNA_E-fasciculatus_F_contig12801.2121.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=256bp
AAARCRRKRSRKRRPTTTSTAAARVTGLASCRHPRPPCTPLLIMVVVVAL
LGSVAEAGGGSSGRGSDSSVPWWYPSRDWGLPSDAAAGSGGGGEAGGSGG
WTGLGVPRRRFREEAKLAEEFVASWVASGLAEDEERRGGDVMMPACDVLE
AGNHTLRRLGASVDRCASPYYTLPEIHPSQLVYTEVDPAEAAEKREREDR
AAARRKKRQEEAKKKSGKAGGSAGLSSGDGEEDHGDEEEEEEDNFLGIFL
FLKVS*
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