mRNA_E-fasciculatus_F_contig1275.2090.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: A0A6H5K326_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K326_9PHAE) HSP 1 Score: 310 bits (793), Expect = 1.030e-102 Identity = 171/233 (73.39%), Postives = 190/233 (81.55%), Query Frame = 1
Query: 4 KVEERFGTFSVRGARVRHAFRNRRVHMCTVAAPFLLLLIVGAVVETIADEVAWEDVGNVVGIGGGSLAVLYIAIKALPLVFRGRGEKILAQARSMGKSVGSSHLGFMAEVEEELQIMLDMIKDKENDKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDDLVRQQVSGSEYLDKIIHVPFCIPNGTKRERGSLKDDMLRTCSSPGR 702
KVE RFG FSVR ARVR+AFR+ + +C AA L L+VGAV + IADEV WEDVGNV+G GG VLYIAIK GRGE ILAQARSMGKSVGSSHLGFMAEVEEELQ++LDMIKD +KEKFALVVSIDNLDRCPH D+VQVLQAVH LLEKPGANFILILALD RVVIAAI AGMDDLVRQ+VSGSEYL+KII+VPF IP+GT +R L D ML+ CS+PG+
Sbjct: 113 KVEARFGKFSVRRARVRNAFRDPTLDVCAAAA--LATLLVGAVAQAIADEVGWEDVGNVLGYGGVP-RVLYIAIK-------GRGENILAQARSMGKSVGSSHLGFMAEVEEELQLLLDMIKDMGTEKEKFALVVSIDNLDRCPHDDIVQVLQAVHFLLEKPGANFILILALDSRVVIAAIGAGMDDLVRQRVSGSEYLEKIIYVPFFIPDGTMEDRKILSDVMLKACSNPGK 335
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: A0A6H5JLB7_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB7_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.560e-57 Identity = 115/227 (50.66%), Postives = 161/227 (70.93%), Query Frame = 1
Query: 19 FGTFSVRGARVRHAFRNRRVHMCTVAAPFLLLLI-----VGAVVETIA--DEVAWEDVGNVVGIGGGSLAVLYIAIKALPLVFRGRGEKILAQARSMGKSVGSSHLGFMAEVEEELQIMLDMIKDKENDKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDDLVRQQVSGSEYLDKIIHVPFCIPNGTKRERGSLKDDML 678
FG +VR R+R + AA ++++ +G ++E D V + + V G+ G ++++ IKALP VF+G+GE IL +A+SM +SVGS+ LGFMA+V+EE+QI+LDMI D+ +K KFALVVSIDNLDRCPH ++V+VL+AVHLLLE+ N ++ILALDPRV+I+AIEA + VR++VSGSEYLDKIIHVPFC+P GT+++R +L D L
Sbjct: 300 FGKGAVRSFRLRKTSSEITMERLCFAAMGAVIVVGLAVALGLIIEATGGLDNVLTKALAFV-GLAGVPISIVLWTIKALPAVFQGQGEVILNKAKSMHESVGSARLGFMADVQEEIQILLDMITDRSTEKMKFALVVSIDNLDRCPHRNIVKVLEAVHLLLERDQTNVVVILALDPRVIISAIEADLGPEVRKEVSGSEYLDKIIHVPFCVPFGTQKQRLTLIDSWL 525
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: D7FSL6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL6_ECTSI) HSP 1 Score: 149 bits (377), Expect = 4.470e-38 Identity = 89/201 (44.28%), Postives = 132/201 (65.67%), Query Frame = 1
Query: 4 KVEER--FGTFSVRGARVRHAFRNRRVH-MCTVAAPFLLLLIVGAVVETIADEVA-----WEDVGNVVGIGGGSLAVLYIAIKALPLVFRGRGEKILAQARSMG-KSVGSSHLGFMAEVEEELQIMLDMIKDKENDKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDDLVRQQ 579
+VEE FG +VR RVRHA + C V +++ V A + A+++A E V G+ +++L K LP+VF+G+GE I+ +A+SMG +SVG +HLGFMA+V +EL+++L M++ K ++++ LVVSIDNLDRCPH +V+VL+AVHLLLEK N ++LALDPRV+IAAIE M + +R++
Sbjct: 432 QVEEHPCFGKGAVRATRVRHAVTSSTCSDWCLVIFTAVIVAGVVAAAKLAAEQIANMQEVLEQVVATAGLAAVPISLLLWIFKVLPVVFKGQGELIVEEAQSMGDESVGIAHLGFMADVRDELEVLLGMLEQKSTKEDRYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDNVNVAVMLALDPRVIIAAIEQDMGEGIRKE 632
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: A0A6F9DG35_9ASCI (Uncharacterized protein LOC100178218 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DG35_9ASCI) HSP 1 Score: 98.2 bits (243), Expect = 7.990e-20 Identity = 53/152 (34.87%), Postives = 99/152 (65.13%), Query Frame = 1
Query: 205 AVLYIAIKALPLVFRGRGEKILAQARSMGKSVGSSHLGFMAEVEEELQIMLDMIKD-KENDKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDD-LVRQQVSGSEYLDKIIHVPFCIPNGTKRER 654
A L + ++ +F+ + ++ QA S K ++ LGFM++V++E++++ +++ + ++ + +++SID+LDRCPH V VL+AV +LL + F+ ++ALD RV + IE GM + L++ V+G EYL KII++PFC+P + R++
Sbjct: 514 AALLVIMRFCYAMFKSQTRRV-NQALSGAKGNMAAELGFMSKVKDEIKVIEKLVRCLRFTHQQNYKIIISIDDLDRCPHEKVKSVLEAVSILLSDRCSPFVCLIALDSRVAVKCIEEGMGNALLKANVNGHEYLKKIINLPFCLPELSSRDK 664
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: F6UYN1_CIOIN (KAP NTPase domain-containing protein n=3 Tax=Ciona intestinalis TaxID=7719 RepID=F6UYN1_CIOIN) HSP 1 Score: 91.7 bits (226), Expect = 1.230e-17 Identity = 51/129 (39.53%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 274 QARSMGKSVGSSHLGFMAEVEEELQIMLDMIKD-KENDKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDD-LVRQQVSGSEYLDKIIHVPFCIPNGTKRER 654
QA K ++ LGFM +V++E++I+ +++ + K+ + +++SID+LDRCPH V VL+AV +LL + FI ++ALD RV + IE M L++ V+G EYL KII++PFC+P R++
Sbjct: 134 QALVGAKGNMATELGFMNKVKDEVKIIEKLVRCLRFTHKKNYKIIISIDDLDRCPHEKVKSVLEAVSILLSDRSSPFICLIALDSRVAVKCIEEDMGSALLKANVNGHEYLKKIINLPFCLPELGSRDK 262
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: H2YLT8_CIOSA (KAP NTPase domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YLT8_CIOSA) HSP 1 Score: 88.2 bits (217), Expect = 1.290e-17 Identity = 46/119 (38.66%), Postives = 80/119 (67.23%), Query Frame = 1
Query: 304 SSHLGFMAEVEEELQIMLDMIKD-KENDKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDD-LVRQQVSGSEYLDKIIHVPFCIPNGTKRER 654
++ LGFM +V++E++I+ +++ + + + +++SID+LDRCPH V VL+AV++LL + F+ ++ALD RV + IE M L++ V+G EYL KII++PFC+P R++
Sbjct: 38 AAELGFMNKVKDEVKIIEKLVRCLRFTHSKNYKIIISIDDLDRCPHEKVKSVLEAVNILLSDRSSPFVCLIALDSRVAVKCIEEDMGAALLKANVNGHEYLKKIINLPFCLPELGLRDK 156
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: A0A8J9ZDS5_BRALA (NKPD1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZDS5_BRALA) HSP 1 Score: 91.3 bits (225), Expect = 1.820e-17 Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 286 MGKSVGSSHLGFMAEVEEELQIMLDMIKDKEN-DKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDDLVRQQVSGSEYLDKIIHVPFCIPNGTKRERGSLKDDMLR 681
M K ++ LGFM+EV+ E+Q + +++ E+ ++ +++ +D+LD C VV VL+A+++LL GANF+ +LA+DP++V+ +E+ + D++ SG EYL +I+HVP C+P R L ++R
Sbjct: 278 MKKPDFANQLGFMSEVKAEVQTVTSLLRFLEHVTGVQYRVIIVVDDLDCCSGDRVVGVLEAMNILLSDNGANFVSVLAIDPKIVVNCLESRLTDIMINNSSGYEYLKRIVHVPVCLPEPNVGNRRELLRTVVR 410
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: A0A6P4YZH6_BRABE (uncharacterized protein LOC109468822 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YZH6_BRABE) HSP 1 Score: 90.9 bits (224), Expect = 2.690e-17 Identity = 50/151 (33.11%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 286 MGKSVGSSHLGFMAEVEEELQIMLDMIKDKEN-DKEKFALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDDLVRQQVSGSEYLDKIIHVPFCIPNGTKRERGSLKDDMLR-----------TCSSPGR 702
M K + LGFM++V+ E+Q + +++ E+ ++ +++ +D+LD CP VV VLQA+++LL ANF+ I+A+DP++V+ +E+ + + + SG EYL +I+HVP C+P R L +++R + +SPGR
Sbjct: 625 MKKPDFAEQLGFMSQVKGEVQTVTSLLRFLEHVTGVQYRVIIVVDDLDCCPGDRVVDVLQAMNILLSDQEANFVSIVAMDPKIVVNCLESHLTETIINNYSGYEYLKRIVHVPVCLPEPNVGNRRDLLREVVRGKPGIITSEYPSATSPGR 775
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: UPI0003F072B4 (uncharacterized protein LOC100371921 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F072B4) HSP 1 Score: 87.4 bits (215), Expect = 4.460e-16 Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 304 SSHLGFMAEVEEELQIMLDMIKDKENDKEK-FALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDDLVRQQ-VSGSEYLDKIIHVPFCIP---NGTKRE 651
SS LGFMA+++ E++I +I N K++ +V+++D+LDRCP VQV++A+++LL A FI I A+D RV++ AIE + L + +SG EYL K++ + FCIP N TKR+
Sbjct: 595 SSKLGFMADIKREVKIASGLINWMSNYKKRPIRIVITVDDLDRCPKQKAVQVVEALNILLSDEFAPFICIFAVDSRVIVEAIEESLGKLSKNAYLSGHEYLKKMLQLQFCIPTMTNKTKRK 715
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Match: A0A2R2MJF0_LINUN (kinase D-interacting substrate of 220 kDa n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MJF0_LINUN) HSP 1 Score: 87.0 bits (214), Expect = 5.580e-16 Identity = 56/158 (35.44%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 199 SLAVLY---IAIKALPLVFRGRGEKILAQARSMGKSVGSSHLGFMAEVEEELQIMLDMIKDKENDKEK-FALVVSIDNLDRCPHGDVVQVLQAVHLLLEKPGANFILILALDPRVVIAAIEAGMDD-LVRQQVSGSEYLDKIIHVPFCI----PNGTK 645
SL VLY + I+ + V+R + +I M ++ LGFM V++E++++ +I + K + V+ +D+LDRC +V++L+AV++LL P ++FI +LA+DPR+++ +IE D L VSG EYL KII +PF + P TK
Sbjct: 598 SLTVLYKLKVVIRLMRAVWRSQKSRIQRLQLRMTRANFDEELGFMYRVKKEVEVVTKLINYMQWLHGKMYRFVIFVDDLDRCEEKKIVKMLEAVNILLSDPNSSFISVLAIDPRLIVKSIEHSYGDRLTEANVSGYEYLKKIITLPFSLSPANPEDTK 755 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1275.2090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1275.2090.1 >prot_E-fasciculatus_F_contig1275.2090.1 ID=prot_E-fasciculatus_F_contig1275.2090.1|Name=mRNA_E-fasciculatus_F_contig1275.2090.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=234bp AKVEERFGTFSVRGARVRHAFRNRRVHMCTVAAPFLLLLIVGAVVETIADback to top mRNA from alignment at E-fasciculatus_F_contig1275:9515..11647- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1275.2090.1 ID=mRNA_E-fasciculatus_F_contig1275.2090.1|Name=mRNA_E-fasciculatus_F_contig1275.2090.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2133bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1275:9515..11647- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1275:9515..11647- >mRNA_E-fasciculatus_F_contig1275.2090.1 ID=mRNA_E-fasciculatus_F_contig1275.2090.1|Name=mRNA_E-fasciculatus_F_contig1275.2090.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1275:9515..11647- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |