mRNA_E-fasciculatus_F_contig12684.2050.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE) HSP 1 Score: 377 bits (969), Expect = 3.100e-122 Identity = 292/348 (83.91%), Postives = 294/348 (84.48%), Query Frame = 1
Query: 1 MSGSSPISTPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYHLELTPQQQHDADQAAIKAAXXXXXXVHXXXXXXXXXXXXXXXXXXXXXSSIPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFGDLGNPTSPLAASSGVQXXXXXXXXXXXXXXXXXDGAYGPDIQAMEEAAXXXXXXXXXXXXXXAAQSPYGMPPHMSMAGMGMGYSPYVHMA 1044
MSGSSPISTPT XXXXXXXXX PY LELTPQQQHDADQAAIKAAXXXX VHXXXXXXXXXXXXXXXXXXXXX IPGLEDKRAKRGFSKRVTLRDLERYFEYPIE+VSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTG XXXXXXXXXXXXXXXXXXXXX EFGDLGNPTSPLA + GV DGAYGPDIQAMEEAA XXXXXXXXXXXXXAAQSPYGMPPHMSMAGMGMGYSPYVHMA
Sbjct: 1 MSGSSPISTPTALPPAAAESVEPSATDQQXXXXXXXXXAHPYDLELTPQQQHDADQAAIKAAXXXXEAVHXXXXXXXXXXXXXXXXXXXXX--IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTGGXXXXXXXXXXXXXXXXXXXXXAT-----EFGDLGNPTSPLAEAPGVPQEEAGPAGVGEASAGG-DGAYGPDIQAMEEAAAXXXXXXXXXXXXXAAQSPYGMPPHMSMAGMGMGYSPYVHMA 340
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI) HSP 1 Score: 322 bits (824), Expect = 6.420e-102 Identity = 255/301 (84.72%), Postives = 256/301 (85.05%), Query Frame = 1
Query: 1 MSGSSPISTPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYHLELTPQQQHDADQAAIKAAXXXXXXVHXXXXXXXXXXXXXXXXXXXXXSSIPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFGDLGNPTSPLAASSGVQXXXXXXXXXXXXXXXXXDGAYGPDIQA 903
MSGSSPISTPT XXXXXXXXPYHLELTPQQQHDADQAAIKAAXXXX VHXXXXXXXXXXXXXXXXXXXXX IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTGXXXXXXXXXXXXXXXXXXXXXXXXXXX EFGDLGNPTSPLAA+ GVQ DGAYGPDIQA
Sbjct: 1 MSGSSPISTPT--ALPPAAAEREGPSATDQQHXXXXXXXXPYHLELTPQQQHDADQAAIKAAXXXXEAVHXXXXXXXXXXXXXXXXXXXXX--IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXT-EFGDLGNPTSPLAAAPGVQQEEAGSAGGGEASAGG-DGAYGPDIQA 295
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.280e-17 Identity = 48/132 (36.36%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 286 GLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI-KYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTG 678
G++ ++ R +R+TL LE + P+ ++ +GVS T++K+LCR+YGI+RWP+RQIRS+ K + K+++ A+ VD E++ L K+ ++ + A+ G +A +R +I RP ELDA+ L +G
Sbjct: 86 GVKIRQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSSG 217
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.160e-16 Identity = 43/114 (37.72%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 328 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYV-ELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETL 666
+TL L+ ++ P+ E++K +G+S T++K++CRKYGI+RWP+RQIRS+NKS + + E + +R LQ QL L KK+L+ + A++G + +R ++ PE+L+ + +
Sbjct: 14 ITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAV 127
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.430e-15 Identity = 41/114 (35.96%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 328 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQ-RLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETL 666
+TL L+ Y+ P+ E++K +G+S T++K++CRK+GI+RWP+RQIRS+NK+ + ++ A+ A + ++ QL L KK+L+ + A++G + +R ++ PE+L+ E++
Sbjct: 11 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEESV 124
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI) HSP 1 Score: 84.3 bits (207), Expect = 1.690e-14 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 328 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQ-RLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETL 666
+TL L+ Y+ P+ E++K +G+S T++K++CRK+GI+RWP+RQIRS+NK+I+ + + D L+ Q+ L K++L+ + A++G +R +I PE L E++
Sbjct: 14 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQEESM 127
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: A0A2D4BXJ0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXJ0_PYTIN) HSP 1 Score: 82.0 bits (201), Expect = 2.170e-13 Identity = 39/96 (40.62%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 292 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLI 579
E R K +K +T+ +L +F+ PI +V+K G+ T++K++CR+ GIKRWP+RQIRS++KSI +E +AQG +R + ++Q++SL K+ +
Sbjct: 151 ESNRVKSLVTKHITIDELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAQGPERDKYRDQIISLKLKRDAV 246
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: G4ZYN2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZYN2_PHYSP) HSP 1 Score: 80.9 bits (198), Expect = 5.280e-13 Identity = 42/120 (35.00%), Postives = 76/120 (63.33%), Query Frame = 1
Query: 292 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKS---ILQMRP 642
E R K +K +++ +L +F+ PI +V+K G+ T++K++CR+ GIKRWP+RQIRS++KSI +E +A G +R++ ++Q+V+L K++ + +S + + S +L RP
Sbjct: 141 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESVIADPNKDSSMRPKTSPPSLLTPRP 260
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: A0A024FU44_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FU44_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 8.580e-13 Identity = 37/96 (38.54%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 292 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLI 579
E R+K +K+++L +L +F+ PI EV+K G+ T++K++CR+ GIKRWP+RQIRS+ KSI +E +A +++R Q+Q+++L +++ +
Sbjct: 97 ESGRSKNSLTKQISLDELRAHFDRPIIEVAKKFGICITLMKKICRRNGIKRWPHRQIRSLTKSIAALEAAMLSANETEQERYQDQIMNLRRRRESV 192
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Match: D0NKH4_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NKH4_PHYIT) HSP 1 Score: 79.7 bits (195), Expect = 1.120e-12 Identity = 37/96 (38.54%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 292 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLI 579
E R K +K +++ +L +F+ PI +V+K G+ T++K++CR+ GIKRWP+RQIRS++KSI +E +A G +R++ ++Q+V+L K++ +
Sbjct: 128 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESV 223 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12684.2050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12684.2050.1 >prot_E-fasciculatus_F_contig12684.2050.1 ID=prot_E-fasciculatus_F_contig12684.2050.1|Name=mRNA_E-fasciculatus_F_contig12684.2050.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=370bp MSGSSPISTPTPSPPEAAEASVGPAASDQQQQQQQQQHAHPYHLELTPQQback to top mRNA from alignment at E-fasciculatus_F_contig12684:2..3745- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12684.2050.1 ID=mRNA_E-fasciculatus_F_contig12684.2050.1|Name=mRNA_E-fasciculatus_F_contig12684.2050.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3744bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12684:2..3745- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12684:2..3745- >mRNA_E-fasciculatus_F_contig12684.2050.1 ID=mRNA_E-fasciculatus_F_contig12684.2050.1|Name=mRNA_E-fasciculatus_F_contig12684.2050.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2220bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12684:2..3745- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |