mRNA_E-fasciculatus_F_contig1260.1994.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1260.1994.1
Unique NamemRNA_E-fasciculatus_F_contig1260.1994.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: A0A7S1Z6N7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z6N7_TRICV)

HSP 1 Score: 102 bits (255), Expect = 3.530e-22
Identity = 68/178 (38.20%), Postives = 100/178 (56.18%), Query Frame = 1 
Query:  247 LEDESVPLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSLSGDEIDSPDGKGILGGVNG---------------GAGGFVNKGGHKPHTQGMHIWSKP-FTKRTG--RGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            ++D    + +VSV  G      +  FH++ L  V+++VP G  V+++SV GAFR+GKS LLSWF+R LS       D +G +G   G               G  GF  +GG + +T G+ IWS P F +R+    G+   +AV+LVDTQG FDH+T+  L  S+FGLST +S   ++
Sbjct:   39 VDDAPQAVQIVSV--GNESDAYAFTFHEERLNSVLQKVPPGWKVSVVSVVGAFRTGKSFLLSWFLRYLS----YHSDSRGKVGADKGKDGEEKKWYDHFHTLGNDGFDWRGGAERNTTGIWIWSHPSFLRRSNPQTGEDENVAVVLVDTQGMFDHETTMALTASIFGLSTLLSSYQIY 210
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: A0A7S2R5N0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5N0_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.430e-21
Identity = 73/187 (39.04%), Postives = 105/187 (56.15%), Query Frame = 1 
Query:  208 STEEMAKLETRTILEDESVPLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSLS-----------GDEIDSPDGKGILGGVNG-GAGGFVNKGGHKPHTQGMHIWSKP-FTKRT-GRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            +TEE   LE     +  + P+ + SV  G  +   +  FH + L  +M+++P G  V+++SV GAFR+GKS LLSWF+R L+           GD+ D  DGK      +  G  GF  +GG K  T G+ +WS P F KR    G   ++AV+L+DTQG FDHDT+  L  S+FGLST +S   ++
Sbjct:   14 NTEEDEILEEEIGPDSVAQPVQICSV--GTIEDKYAFTFHDERLNMIMQKIPPGWKVSVVSVVGAFRTGKSFLLSWFLRYLNYHSSSASSKIQGDQKDD-DGKMWYDQFDSLGQDGFHWRGGFKRDTTGLWMWSHPYFLKRNLPDGSTEDIAVVLLDTQGMFDHDTTMKLAASIFGLSTLLSSYQIY 197
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: A0A7S2NXQ9_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NXQ9_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.080e-21
Identity = 64/169 (37.87%), Postives = 98/169 (57.99%), Query Frame = 1 
Query:  259 SVPLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSLSGDEID--SPDGKGILGGVNGGAG-----------GFVNKGGHKPHTQGMHIWSKPFTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            + P+ +VS+  G  +   +  FHKD L  ++ +VP    VA++SV GAFR+GKS LLSWF++ L  D     + D       + GG G           GF  +GG + +T G+ +WS+PF++    G K  ++VLLVDTQG FDH+T+  L  ++FGLST +S + ++
Sbjct:   59 AAPVQIVSI--GNEEDAYAFTFHKDALNEILNKVPEKEHVAVVSVVGAFRTGKSFLLSWFLKYLHSDANGDAAKDWYTKFDKLGGGPGSNPDDTDAETHGFDWRGGSERNTTGIWMWSEPFSRTRADGSK--ISVLLVDTQGMFDHETTMALTAAIFGLSTLLSSHQIY 223
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: A0A7S0XL21_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XL21_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.190e-20
Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 1 
Query:  208 STEEMAKLETRTILEDESV-------PLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSL-------SGDEIDSPDGKGI--LGGVNGGAGGFVNKGGHKPHTQGMHIWSKP-FTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            +TEE A      + +DE         PL +VSV  G  D   + EFH++ L  +MR++P G  VA++SV GAFR+GKS LL+WF+  L       S  ++DS D K    +  +   A  F  +GG + +T G+ +WS+P F K+   G +N MAVL+VD+QG FD++T+  L  S+FGLST +S   ++
Sbjct:   23 TTEETATTTVPAVSDDEESVDMDRPRPLQIVSV--GTEDDKFAFEFHEEQLNTIMRRIPPGWKVAVVSVVGAFRTGKSFLLTWFLAYLRQLKESGSTADLDSGDKKWFEKIESIENDA--FHWRGGAERNTTGIWMWSQPHFVKK---GDEN-MAVLIVDSQGMFDNETTMSLTASIFGLSTLLSSYQIY 204
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: A0A1E7ELI6_9STRA (GBP-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ELI6_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.020e-20
Identity = 62/170 (36.47%), Postives = 99/170 (58.24%), Query Frame = 1 
Query:  238 RTILEDESVPLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSL-------SGDEIDSPDGKGILGGVNGGAGGFVNKGGHKPHTQGMHIWSKPFTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            +T   D++ P+ +VS+  G  D   + +FH++ L  +MR++P G  V++ISV GAFR+GKS LL+WF+  L       S + ID  D K      + G   F  KGG    T G+ +WS+P   +   G+   +A++LVD+QG FD++T+  L  ++FGLST +S   ++
Sbjct:   36 KTTRNDDAEPIQIVSI--GTEDDKYAFDFHEEKLNSIMRKIPPGWKVSVISVVGAFRTGKSFLLTWFLTYLNELKKRGSAELIDDEDQKWFERIESIGNDAFHWKGGADRDTTGIWMWSQPHFVKMKNGES--LAIILVDSQGMFDNETTMSLTSAIFGLSTLLSSYQIY 201
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: A0A7S1VPD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPD5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.150e-20
Identity = 66/176 (37.50%), Postives = 100/176 (56.82%), Query Frame = 1 
Query:  247 LEDESVPLTL----VSVVK-GGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSLSGDEIDSPDGKGILGGVNG----------GAGGFVNKGGHKPHTQGMHIWSKP-FTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            +++E+ P T     + +VK G  +   +  F ++ L  ++ ++P G  VAI+SV GAFR+GKS LLSWF+R LS         K +  G +           G  GF  +GG + +T G+ +WS+P F K+   G+  + AVLLVDTQG FDH+T+  L  S+FGLST +S   ++
Sbjct:   42 VKEETAPKTTGPEALQIVKIGNEEDAYAFHFKEEALNSILSKIPPGWKVAIVSVVGAFRTGKSFLLSWFLRYLSHLSSSDEAKKLVDEGDDAKKWYHQFDTLGKDGFDWRGGSERNTTGIWMWSEPHFCKKPSTGE--QFAVLLVDTQGMFDHETTMALTASIFGLSTLLSSYQIY 215
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: A0A6H5K346_9PHAE (GB1/RHD3-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K346_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.140e-19
Identity = 76/186 (40.86%), Postives = 104/186 (55.91%), Query Frame = 1 
Query:  250 EDESVPLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSL-SGDEIDSP------DGKGILGG-------VNGGAGG-------------FVNKGGHKPHTQGMHIWSKPFTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            E ES PL LVS   G  +   S +  ++NL RV+ +VP G  V+++SV GAFR+GKS LLS+F+R L SG E D+       DG  +  G       V GGA G             F  +GG +  T G+ IWS+PF +R   GK  E+AVL+VDTQG FD++TS  L   +F +ST +S   ++
Sbjct:   14 ERESCPLQLVST--GDAENDYSFKLCEENLDRVLSKVPDGMEVSVVSVVGAFRTGKSFLLSFFLRYLNSGSEDDTSEAWMTADGPSLREGNRNSVKPVGGGAQGVQEEEGEGSSLRSFEWRGGVERMTTGIWIWSEPFVRRMEGGK--EVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIY 195
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: B7G313_PHATC (Anti-viral guanylate-binding protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G313_PHATC)

HSP 1 Score: 99.0 bits (245), Expect = 2.550e-19
Identity = 63/164 (38.41%), Postives = 94/164 (57.32%), Query Frame = 1 
Query:  250 EDESVPLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSL----SGDEIDSPDGKGILGGVNG-GAGGFVNKGGHKPHTQGMHIWSKPFTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            +DE+ P  L  V  G      + +F ++ L  ++ +VP+G  V+I+SV GAFR+GKS LLSWF+R L    +  + D+ + +     +   G  GF  K G   +T G+ +WS P    TG  K++  AVLLVDTQG FDH+T+  L  S+FG ST +S   ++
Sbjct:   57 DDEAKPQALQIVSIGSEKDAYAFKFEEEKLQAILSRVPVGWDVSIVSVVGAFRTGKSFLLSWFLRYLYQVQADQKSDATNTEPWYERIESLGNEGFEWKAGSDRNTTGIWMWSHPHFIETG--KEHPTAVLLVDTQGMFDHETTMSLTASIFGFSTLLSSYQIY 218
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BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: K0TPQ6_THAOC (GB1/RHD3-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPQ6_THAOC)

HSP 1 Score: 99.0 bits (245), Expect = 3.260e-19
Identity = 63/168 (37.50%), Postives = 93/168 (55.36%), Query Frame = 1 
Query:  262 VPLTLVSVVKGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSLSGD----------EIDSPDGKGI---LGGVNGGAGGFVNKGGHKPHTQGMHIWSKPFTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            VP     V  G  +   +  FH+D L  ++ +VP G  V ++SV GAFR+GKS LLSWF+R L  +            D  DGK     +  +N   G F  +GG + +T G+ +WS P+  +   G+  ++AVLLVDTQG FDH+T+  L  ++FGLST +S   ++
Sbjct:  461 VPSARQIVSIGNSENEYAFTFHEDELNGILSKVPAGWKVCVVSVVGAFRTGKSFLLSWFLRYLEANCTMRAKDDTAGSDGSDGKPWHQRVQTLNQHEGSFDWRGGKERNTTGIWMWSDPYYLKRDGGE--DVAVLLVDTQGMFDHETTVGLTAAIFGLSTLLSSYQIY 626
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Match: B8C0C1_THAPS (GB1/RHD3-type G domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0C1_THAPS)

HSP 1 Score: 97.1 bits (240), Expect = 1.230e-18
Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 1 
Query:  322 FHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWFVRSLSGDEIDSPDGKGILGGVNGGA-------------GGFVNKGGHKPHTQGMHIWSKP-FTKRTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVW 726
            FH++ L  ++ +VP G  V+++SV GAFR+GKS LLSWF+R L G    +  G G      GG              G F  +GG + +T GM +WS P F  R+  G+  E+AVLLVDTQG FDH+T+  L  ++FGLST +S   ++
Sbjct:  105 FHEEELNTILAKVPPGWKVSVVSVVGAFRTGKSFLLSWFLRYLEGH--CTRRGAGAANKDEGGKKWYERVQTLNQHEGSFDWRGGTERNTTGMWMWSDPYFLPRSENGE--EVAVLLVDTQGMFDHETTVGLTAAIFGLSTLLSSYQIY 249
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1260.1994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1Z6N7_TRICV3.530e-2238.20Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2R5N0_9STRA1.430e-2139.04Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2NXQ9_9STRA2.080e-2137.87Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S0XL21_9STRA1.190e-2038.95Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A1E7ELI6_9STRA4.020e-2036.47GBP-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A7S1VPD5_9STRA4.150e-2037.50Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A6H5K346_9PHAE1.140e-1940.86GB1/RHD3-type G domain-containing protein n=2 Tax=... [more]
B7G313_PHATC2.550e-1938.41Anti-viral guanylate-binding protein n=2 Tax=Phaeo... [more]
K0TPQ6_THAOC3.260e-1937.50GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
B8C0C1_THAPS1.230e-1841.61GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1260contigE-fasciculatus_F_contig1260:520..4218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.7
Seed ortholog evalue4.1e-19
Seed eggNOG ortholog159749.K0TPQ6
KEGG koko:K17339
EggNOG free text desc.Guanylate-binding protein, N-terminal domain
EggNOG OGs2XAHQ@2836,KOG2037@1,KOG2037@2759
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categorysignal peptide
Exons4
Model size962
Cds size594
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1260.1994.1prot_E-fasciculatus_F_contig1260.1994.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1260 2217..3988 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927768.843662-UTR-E-fasciculatus_F_contig1260:519..6251622927768.843662-UTR-E-fasciculatus_F_contig1260:519..625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1260 520..625 +
1695995685.7318504-UTR-E-fasciculatus_F_contig1260:519..6251695995685.7318504-UTR-E-fasciculatus_F_contig1260:519..625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1260 520..625 +
1622927768.8612146-UTR-E-fasciculatus_F_contig1260:2184..22161622927768.8612146-UTR-E-fasciculatus_F_contig1260:2184..2216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1260 2185..2216 +
1695995685.7455087-UTR-E-fasciculatus_F_contig1260:2184..22161695995685.7455087-UTR-E-fasciculatus_F_contig1260:2184..2216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1260 2185..2216 +
1622927768.9254634-UTR-E-fasciculatus_F_contig1260:3988..42181622927768.9254634-UTR-E-fasciculatus_F_contig1260:3988..4218Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1260 3989..4218 +
1695995685.7858634-UTR-E-fasciculatus_F_contig1260:3988..42181695995685.7858634-UTR-E-fasciculatus_F_contig1260:3988..4218Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1260 3989..4218 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927768.8740659-CDS-E-fasciculatus_F_contig1260:2216..23301622927768.8740659-CDS-E-fasciculatus_F_contig1260:2216..2330Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1260 2217..2330 +
1695995685.7566073-CDS-E-fasciculatus_F_contig1260:2216..23301695995685.7566073-CDS-E-fasciculatus_F_contig1260:2216..2330Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1260 2217..2330 +
1622927768.894056-CDS-E-fasciculatus_F_contig1260:3152..33641622927768.894056-CDS-E-fasciculatus_F_contig1260:3152..3364Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1260 3153..3364 +
1695995685.7663436-CDS-E-fasciculatus_F_contig1260:3152..33641695995685.7663436-CDS-E-fasciculatus_F_contig1260:3152..3364Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1260 3153..3364 +
1622927768.9101572-CDS-E-fasciculatus_F_contig1260:3720..39881622927768.9101572-CDS-E-fasciculatus_F_contig1260:3720..3988Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1260 3721..3988 +
1695995685.776148-CDS-E-fasciculatus_F_contig1260:3720..39881695995685.776148-CDS-E-fasciculatus_F_contig1260:3720..3988Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1260 3721..3988 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1260.1994.1

>prot_E-fasciculatus_F_contig1260.1994.1 ID=prot_E-fasciculatus_F_contig1260.1994.1|Name=mRNA_E-fasciculatus_F_contig1260.1994.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=198bp
MRFFGLKVAAVLAAGCTVGVAVVSTEEMAKLETRTILEDESVPLTLVSVV
KGGPDGVDSLEFHKDNLTRVMRQVPLGTPVAIISVAGAFRSGKSSLLSWF
VRSLSGDEIDSPDGKGILGGVNGGAGGFVNKGGHKPHTQGMHIWSKPFTK
RTGRGKKNEMAVLLVDTQGTFDHDTSTLLQGSLFGLSTTVSMNAVWG*
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mRNA from alignment at E-fasciculatus_F_contig1260:520..4218+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1260.1994.1 ID=mRNA_E-fasciculatus_F_contig1260.1994.1|Name=mRNA_E-fasciculatus_F_contig1260.1994.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3699bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1260:520..4218+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCTCATCTCCTAGAAAGCGTTCTACCGGATCAAAACACGGCTGCGCGAA
GATATACACACCAACACCTGGCCCGCACAGCAAGCACACGATCCTGGGGT
TGTAAGGTGAGGAGAGATCTAGCCCACCCTGCCGACCGCCCCCTGCACCA
AAGTCACAGAAAGACTACCCTTTCGAACATGTCGCCCCGGTGGTCTGGTT
GGGCGTAACCCTCTAGCTCCAGGTAGGTCATGGGTTCGACACCCGGCGTG
AGTGAGCTTTTCTTACAACGTGAGTTTTTCTCTCGCTTGCGTGTGTACAT
AGGGAAGAGAGAGCCTAACTCTTATCGTAGGCAAAAGTACCGCAGGAGAG
GAGAGGGAGAGGAGCTCTCCTGTGCGACCACGGGTTGGAAGTAAAATCGG
AATAATGGGAGCTCTGGTTTAAAGTGATGGAAAAAAAAAAAAAAAAAACA
CTGCGGGTGTGTTGAAGTCTTTTTCAGTGAGCGGTGAAACCGGCTGGTTA
TTGATGCGGATAGCGTCCCACATCATTGGGGGTACGAATAGAAAGCCCAG
CCCCCGTGCAGTAGCGTACGCTGTAGCTCTGCCCATGCACAGCAGTACTG
TAGTTAGATACACACATGTATCCGCCTACCGAGAGAGCCTCGGTTCAATT
ACTTCAAGTAGACGGCGATGGGCCCGCCCGGGCAGGACGAACTTGCACCC
ATTCGCCCACCCACCCCCGTACCAAAGGACCACGTTCCCCATTCGCCCCG
CCTACCCCCTGCACCAGACGAGCAACGACGAGGCACACAGGCCCCAATAA
GCAAGATACAGACCGGACCGGCTTGAGCTCAATGAGGCCCGACTTATTTG
AGGACTTTTGTATTCGATCATCTGGTTTTCCTTTCAGAAAAAGCCTCCCA
CACGCACACCCTCCTCCTCTCCCTCATCATCTCAAGCCTACTGCTGTCGG
TGACTAGACTAATACTCCAGGTACCTCTGGAAGAGCTCCTCCTTACTATA
GTGTAGTGCGTCGGCTAGTCTATATATATGGGTCAGCACAAAGATGGATA
GTACTGAATTGTCAACACGGTGTTAAGTCGACACAGAGCCACCTGTTGCA
AATCAACGCACGTCGATCGCGGCGATGCGGTACATAGACAATTTTTGCCA
GACGCCCGTACAAAGGTCACGTTCTCACCATGAAATCCACACAACTCATC
ACCTTAAACAACCCGTTTCCCAAACACGGTAAAGGGCGATCAGGACAGCA
AATATTTCTTCATCCAATGGAGAGAGGCAGGGGAGAGCTTGAGAGAGAGC
TTGAGAGAGAGCTTGAGAGAGAGAGAGAGAGGGAGCTTGAGACAGAGACA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGTCTAAACTTTGCGTGA
CATTTGGGAATATCTTCCTCGCGAAGCTTCATGGAGCTCAACCATGTAGT
TCATGATGCATCTCCTTACTCCTTACAACGCGAATCCCCCCAATATCATT
GTTGGAGCGATCCGAGTCTGCAGCCAACCTGTTCGCGAGTAGACTAGCCT
AGGTTCGAAATATTTCCTCGTATATGCAGCTTCTTGATAACTAAACTATC
AAGCCGCTACCGCAAGCTATTGTATATAAACGCGCGCTACCCCGTTTTTG
GCCTCGCGGTAACAGGTAAAAGCGGCAGCTGATTGCCTACTACAGTCATG
AGGTTCTTCGGACTCAAAGTAGCGGCCGTTCTGGCTGCCGGATGCACCGT
GGGAGTCGCGGTCGTAAGCACCGAGGAGATGGCCAAATTGGAGACCAGGA
CAATTCTCGAGGTACTTTTCTGTGCCCAACGTAGCAACCTTGACCCGGAA
AGAATTGCGACGCATGCAGACAGTGCGATACGGTTTGAAGGGGGTGGTTA
GGCTTTTCACACAAAATCCAGTAGAATAAGGCCAACAAAACGACGCGTGC
CTTCCCGTTGGGGGACTTTTTCGTTTTGTTTTTGTCTTCACATTACACCA
GTGCTCACAGCACCCTGCCAGTGAAGAGCTCCGACCCGTGGTCACACAGG
AGGGCTCCTCTCCTGCGGTGCTTTCGCCTAGAAGTACGACGAACAGTACG
GATGCTTTCTCGCTTTTTCCAACTAGGATCTTGGTGGTTCAAGATAGATA
GGTGTGTAAGGGATCAATCACGCACAGATTCATTTTTTTCTCTCAGAAAA
GGAAGAAATACCCAGGGCGGGGATCGAGCCCACGACAGGAGCCGCTACCC
GATCCTACAGCTCCGAACACCACACGCTCCTAAGCGTGCGTACTTGTTCC
ATCCATCGCACCAGGAATATTTTCGGTAGCTCTCTTGCAGTCTCTTCGGG
ATACGGGGGGGAAAGACTGGGGTCGCACAAAACGGCTTCTCTCCCGCCTC
ATCACGTTTGAGTGTGCAGCGCCGTGAACTGGTTTGATCAGAAGGCCGTC
CTAGTGTGTACGTCGGTTGTGTTTCAAAAACATTGTATGGAATCATCGAA
CATCGTTGCTGAGACTCGAAATGAAATCTGGTCGTCCGGACACACTCGAG
GACAGCATTGATACGCGCGGTAATTCTCATATCACTTCTGGATCACCCAT
TTGCTGTGTGGTGCACAAACTGCGTCTCCACAGGATGAATCTGTCCCGCT
GACGCTTGTGAGTGTGGTTAAAGGAGGTCCCGATGGCGTGGACTCGTTGG
AGTTTCACAAGGACAACCTCACTCGTGTAATGAGACAAGTTCCTCTTGGC
ACTCCGGTAGCCATCATTTCTGTGGCGGGTGCCTTCCGATCCGGGAAATC
TTCTCTCTTGTCTTGGTTCGTGCGGAGCCTCAGCGGTGACGAGATGTAAG
TTCGGGTCTTGATTGAGTCCTTTAGTTGGCTGAGAAAACCTTGGGCACAA
CTCCTACCCCGGCGGATGTACTTCTTGTAGGTTCCGAGGAAAACCACAAC
CAGCGTCGTTCCCACCGTTGTGTGGAGCGAAAATGCGCGTTTCAGCTGTA
GATGGTTGAAATTTGCAAAATCTCCATCACCACAGCATCTATGACCCGGC
GAGGGCAGTTTCGTTGGGAAATACTGGTGGTGGATGCACTCACTGCTGTT
GACGGTTATTTGCTGTTGATGACCGAGAACGAATGCCGGCAACATTTCAA
GCTTTGCGTATGTATCCCGTGTGATGACTTGACGCGGTTATCTATGTGCA
GCGACAGCCCCGACGGCAAGGGTATACTTGGGGGTGTTAATGGCGGCGCT
GGCGGGTTTGTCAACAAAGGAGGCCACAAGCCCCATACGCAAGGCATGCA
CATATGGTCCAAGCCGTTCACCAAAAGAACGGGCCGCGGGAAGAAGAATG
AAATGGCGGTGCTTCTGGTCGATACACAGGGTACGTTCGATCACGACACT
TCCACGCTTCTACAGGGAAGCCTATTCGGGCTCAGCACCACCGTAAGTAT
GAATGCCGTGTGGGGATAGGCGCGTTGAGAGGTGTACTACACTGCAGGAC
CGGGACGTAATGGTGGTCTCGGGAACGACACCTACCCCGATAAATAATTG
CAGAATCAGTCACAAAACACGCCATGCCCATATATATGCTACACGTTAGT
TCGATCCGAGACGCAAATATCCAAGCACTTTCATCATCTACACAGAGATT
TCTGACGTTTTTCTACATACATCAACATCGATATTTTATCTCTAGCAGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1260:520..4218+

>mRNA_E-fasciculatus_F_contig1260.1994.1 ID=mRNA_E-fasciculatus_F_contig1260.1994.1|Name=mRNA_E-fasciculatus_F_contig1260.1994.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1188bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1260:520..4218+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGGTTCTTCGGACTCAAAGTAGCGGCCGTTCTGGCTGCCGGATGCAC
CGTGGGAGTCGCGGTCGTAAGCACCGAGGAGATGGCCAAATTGGAGACCA
GGACAATTCTCGAGATGAGGTTCTTCGGACTCAAAGTAGCGGCCGTTCTG
GCTGCCGGATGCACCGTGGGAGTCGCGGTCGTAAGCACCGAGGAGATGGC
CAAATTGGAGACCAGGACAATTCTCGAGGATGAATCTGTCCCGCTGACGC
TTGTGAGTGTGGTTAAAGGAGGTCCCGATGGCGTGGACTCGTTGGAGTTT
CACAAGGACAACCTCACTCGTGTAATGAGACAAGTTCCTCTTGGCACTCC
GGTAGCCATCATTTCTGTGGCGGGTGCCTTCCGATCCGGGAAATCTTCTC
TCTTGTCTTGGTTCGTGCGGAGCCTCAGCGGTGACGAGATGATGAATCTG
TCCCGCTGACGCTTGTGAGTGTGGTTAAAGGAGGTCCCGATGGCGTGGAC
TCGTTGGAGTTTCACAAGGACAACCTCACTCGTGTAATGAGACAAGTTCC
TCTTGGCACTCCGGTAGCCATCATTTCTGTGGCGGGTGCCTTCCGATCCG
GGAAATCTTCTCTCTTGTCTTGGTTCGTGCGGAGCCTCAGCGGTGACGAG
ATCGACAGCCCCGACGGCAAGGGTATACTTGGGGGTGTTAATGGCGGCGC
TGGCGGGTTTGTCAACAAAGGAGGCCACAAGCCCCATACGCAAGGCATGC
ACATATGGTCCAAGCCGTTCACCAAAAGAACGGGCCGCGGGAAGAAGAAT
GAAATGGCGGTGCTTCTGGTCGATACACAGGGTACGTTCGATCACGACAC
TTCCACGCTTCTACAGGGAAGCCTATTCGGGCTCAGCACCACCGTAAGTA
TGAATGCCGTGTGGGGATAGCGACAGCCCCGACGGCAAGGGTATACTTGG
GGGTGTTAATGGCGGCGCTGGCGGGTTTGTCAACAAAGGAGGCCACAAGC
CCCATACGCAAGGCATGCACATATGGTCCAAGCCGTTCACCAAAAGAACG
GGCCGCGGGAAGAAGAATGAAATGGCGGTGCTTCTGGTCGATACACAGGG
TACGTTCGATCACGACACTTCCACGCTTCTACAGGGAAGCCTATTCGGGC
TCAGCACCACCGTAAGTATGAATGCCGTGTGGGGATAG
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