prot_E-fasciculatus_F_contig126.1988.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig126.1988.1
Unique Nameprot_E-fasciculatus_F_contig126.1988.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length443
Homology
BLAST of mRNA_E-fasciculatus_F_contig126.1988.1 vs. uniprot
Match: D7FYL8_ECTSI (Anaphase-promoting complex subunit 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL8_ECTSI)

HSP 1 Score: 801 bits (2069), Expect = 2.570e-284
Identity = 424/439 (96.58%), Postives = 427/439 (97.27%), Query Frame = 0
Query:    1 MLCVKVEQTLRDVQTSRSRLRFLLLWLEQMSPVVTDSNSADGAEEHEPPSPCLTLANSVLTILREPLPSDKPSPSSRSTAAGASPRSRVESMIGTRVPGLAVDENPVESLEGPPAPRGPSTGPNQKNRFIVLPEDPVLASRTLRGQVQRLGASVEEVFQAPRNRLSRAVANVTCARLCPCSEGGAGDLIRTRAAARAXXXXXXXAPPLVSMRACMCFQDKLPAGCVDVGERDRRESGGVVAVTVVPDNTRGGKGLDVMWVTVVPTPLPTLEGSNVAVAPRDSMWVTGVRSPPGFQVRQVAFYGSVPGVPTQNEGRLAIVLEPVADRHQATALYLLDLDELGFTKVGSLASFDDHGLASPARKARGGGGSKDVIGVARGQGADTPHLMELSSRSRELPAHVKGVAVALSGARGIACAVSSSKHLIVFDLEEDEDGDDEQD 439
            MLCVKVEQTLRDVQTSRSRLRFLLLWLEQMSPVVTDSNSADG EEHEPPSPCLTLANSVLTILREPLPSDKPS SSRSTAAGASPRSRVESMIGTRVPGLAVDENPVESLEGPPA RGP TGPNQKNRF+VLPEDPVLASRTLRGQVQRLGASVEEVFQAPRNRLSRAVANVTCARLCP SEGGAGDLIRTRAAAR XXXXXXXAPPLVSMRACM F DKLPAGCVDVGERDRRESGGVVAVTVVPDNTRGGKGLDV+WVTVVPTPLPTLEGSNVAVAPRDSMWVTGVRSPPGFQVRQVAFYGSVPGVPTQNEGRLAIVLEPVADRHQATAL+LLDLDELGFTKVGSLASFDDHGLASPARKARGGGGSKDVIG ARGQGAD PHL ELSSRSRELPAH KGVAVALSGARGIACAVSSSKHLIVFDLEEDEDGDDEQD
Sbjct:  471 MLCVKVEQTLRDVQTSRSRLRFLLLWLEQMSPVVTDSNSADGTEEHEPPSPCLTLANSVLTILREPLPSDKPSLSSRSTAAGASPRSRVESMIGTRVPGLAVDENPVESLEGPPAARGPLTGPNQKNRFVVLPEDPVLASRTLRGQVQRLGASVEEVFQAPRNRLSRAVANVTCARLCPSSEGGAGDLIRTRAAARXXXXXXXXAPPLVSMRACMGFHDKLPAGCVDVGERDRRESGGVVAVTVVPDNTRGGKGLDVVWVTVVPTPLPTLEGSNVAVAPRDSMWVTGVRSPPGFQVRQVAFYGSVPGVPTQNEGRLAIVLEPVADRHQATALHLLDLDELGFTKVGSLASFDDHGLASPARKARGGGGSKDVIGAARGQGADAPHLTELSSRSRELPAHAKGVAVALSGARGIACAVSSSKHLIVFDLEEDEDGDDEQD 909          
BLAST of mRNA_E-fasciculatus_F_contig126.1988.1 vs. uniprot
Match: W7TKH5_9STRA (Anaphase-promoting complex subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.680e-7
Identity = 114/446 (25.56%), Postives = 182/446 (40.81%), Query Frame = 0
Query:    2 LCVKVEQTLRDVQTSRSRLRFLLLWLEQMSPVVTDSNSADGAEEHEPPSPCLTLANS------VLTILREPLPSDKPSPSSRSTAA--GASPRSRVESMIGTRVPGLAVDENPVESLEGPPA----PRGPSTGPNQKNRFIVLPEDPV--LASRTLRGQVQRLGASVEEVFQAPRNRLSRAVANVTCARLCPCSEGGAGDLIRTRAAARAXXXXXXXAPPLVSMRACMCFQDKLPAGCVDVGERDRRESGGVVAVTVVPDNTRGGKGLDVMWVTVVPTPLPTLEGSNVAVAPRDSMWVTGVRSPPGFQVRQVAFYGSVPGVPTQN-EGRLAIVLEPVADRHQATALYLLDLDELGFTKVGSLASFDDHGLASPARKARGGGGSKDVIGVARGQGADTPHLMELSSRSRELPAHV-KGVAVALSGARGIACAVSSSKHLIVFDLEED 431
            L VK E+TLR+VQ +R  ++  +LWL      +  +    G EE    S  LT  +S      +L+ LR+P+ +  P+ S  +      A P    E++I   +     D+     L  PP+       P+  P   +      ++    LAS +LR QV+ + A  E VF+ P   ++  +++     L   S+G         A AR+        P  + M A                      SGG  A T+V     G     +      P  +P +E + +++            +P GF  +Q A YGS P +P+ N E  + +V E V      T   L  L          L S   H   +P  K    GG++  +   +G  +  P  M  + R+R++ A   + +A+A++G RGIAC  S S  L++ DLEED
Sbjct:  502 LSVKAEETLREVQRARQNIKVFVLWLLDTMQHLPPT----GTEEPPAASKRLTFRHSTKHTRMLLSFLRKPVAASAPTDSEDAPGEKRAAGPTGNTEAVIAVHISSYFKDQ----PLPMPPSRIMTTSAPARSPGSCDAVDGGAKEGAKGLASVSLRTQVKWVLARFEAVFRRPMEAITDRLSSPYVLLL---SQGPLASPPSLYAPARSD-------PSRILMAAV--------------------SSGG--ARTIVLSIEVGALASRMRLGAETPNGIPHVEVTGLSLD-----------APAGFSFQQAALYGSRPHIPSSNPESIVLLVRENVQPFEIRTPAELWKLP---------LTSLLTH--LNPVDKE---GGARACLLDGQGARSLLPWEMVSNVRTRQVAAVAPRKLALAVTGCRGIACVTSESNFLLLADLEED 882          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig126.1988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYL8_ECTSI2.570e-28496.58Anaphase-promoting complex subunit 4 n=2 Tax=Ectoc... [more]
W7TKH5_9STRA1.680e-725.56Anaphase-promoting complex subunit 4 n=2 Tax=Monod... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig126contigE-fasciculatus_F_contig126:14829..17099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig126.1988.1mRNA_E-fasciculatus_F_contig126.1988.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig126 10870..17401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig126.1988.1 ID=prot_E-fasciculatus_F_contig126.1988.1|Name=mRNA_E-fasciculatus_F_contig126.1988.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=443bp
MLCVKVEQTLRDVQTSRSRLRFLLLWLEQMSPVVTDSNSADGAEEHEPPS
PCLTLANSVLTILREPLPSDKPSPSSRSTAAGASPRSRVESMIGTRVPGL
AVDENPVESLEGPPAPRGPSTGPNQKNRFIVLPEDPVLASRTLRGQVQRL
GASVEEVFQAPRNRLSRAVANVTCARLCPCSEGGAGDLIRTRAAARAAAA
ASGGAPPLVSMRACMCFQDKLPAGCVDVGERDRRESGGVVAVTVVPDNTR
GGKGLDVMWVTVVPTPLPTLEGSNVAVAPRDSMWVTGVRSPPGFQVRQVA
FYGSVPGVPTQNEGRLAIVLEPVADRHQATALYLLDLDELGFTKVGSLAS
FDDHGLASPARKARGGGGSKDVIGVARGQGADTPHLMELSSRSRELPAHV
KGVAVALSGARGIACAVSSSKHLIVFDLEEDEDGDDEQDEEE*
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