mRNA_E-fasciculatus_F_contig12592.1981.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: D8LFI7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI7_ECTSI) HSP 1 Score: 213 bits (543), Expect = 1.800e-61 Identity = 181/216 (83.80%), Postives = 184/216 (85.19%), Query Frame = 2
Query: 2 PMFTFGVQDGVDAADGEKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSSVGSLXXXXXXXXXXXXXXXXXXSIDGLKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGLARLGALTSLDLRENKLTEVPPLPEGGCLAQASCG 649
P F + DGVDAADGEKFWEACELQRLDLSFNQITELPAAVSNLS+LVSLKLRKNRLS+VPPE RELPEE LG AVALKGLLLSGNRLSRLPSSV XXXXXXXXXXXXXXXXXXSIDGLKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGLARLGALTSLDLRENKLTEVPPLPEGG LAQ G
Sbjct: 92 PGQVFNLLDGVDAADGEKFWEACELQRLDLSFNQITELPAAVSNLSVLVSLKLRKNRLSSVPPELFSLESLSLLDLTGNAIRELPEEGLGAAVALKGLLLSGNRLSRLPSSVXXXXXXXXXXXXXXXXXXXXXSIDGLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGLARLGALTSLDLRENKLTEVPPLPEGGRLAQVFLG 307
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A6H5KJH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH4_9PHAE) HSP 1 Score: 100 bits (248), Expect = 9.400e-21 Identity = 77/100 (77.00%), Postives = 78/100 (78.00%), Query Frame = 2
Query: 125 VSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSSVGSLXXXXXXXXXXXXXXXXXXSIDGLKRL 424
VSNLS+LVSLKLRKNRLSAVPPE RELPEE L AVALKGLLLSGNRLSRLPSSVGSL XXXXXXXXXXXXXXXX SIDGLKRL
Sbjct: 27 VSNLSVLVSLKLRKNRLSAVPPELFSLESLSLLDLTGNAIRELPEEGLCAAVALKGLLLSGNRLSRLPSSVGSLHXXXXXXXXXXXXXXXXESIDGLKRL 126
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: W2QZW8_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QZW8_PHYPN) HSP 1 Score: 61.6 bits (148), Expect = 1.660e-7 Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 2
Query: 50 EKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSSV 337
EK WE +L R+DLS N I + + L+ + S+KL KN + +P + E+ G V+LK L+LSGN+LSRLP+S+
Sbjct: 62 EKKWECIDLVRIDLSHNAIPSISDEIGGLTSITSIKLTKNAIQILPEGFFELQALTYLDLSHNQLEQDLSESFGALVSLKELVLSGNKLSRLPNSI 157
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A6G0PK55_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PK55_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 4.090e-7 Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 2
Query: 50 EKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSSV 337
EK WE +L ++DLS N I + ++ L+ + S+KL KN L +P + E+ G V LK L+LSGN+LSRLP S+
Sbjct: 63 EKKWECVDLVKVDLSHNAIPSISDEIAGLTSVTSIKLTKNALQVLPEGFFELQALTYLDLSHNQLEQDLSESFGALVGLKELVLSGNKLSRLPDSI 158
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A329S1P8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1P8_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 5.530e-7 Identity = 33/96 (34.38%), Postives = 48/96 (50.00%), Query Frame = 2
Query: 50 EKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSSV 337
EK WE +L ++DLS N I + + L+ + S+KL KN L +P + E+ G LK L+LSGN+LSRLP+S+
Sbjct: 62 EKKWECIDLVKIDLSHNAIPSISDEIGGLTSVTSIKLTKNALQVLPERFFELQTLTYLDLSYNRLEQDLSESFGALAGLKELVLSGNKLSRLPNSI 157
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A2P4Y438_9STRA (Leucine-rich repeat-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y438_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 6.590e-7 Identity = 33/96 (34.38%), Postives = 50/96 (52.08%), Query Frame = 2
Query: 50 EKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSSV 337
EK WE +L ++DLS N I + ++ L+ ++S+KL KN L +P + E +G LK L+LSGN+LSRLP+S+
Sbjct: 62 EKKWECIDLVKIDLSHNAIQSISDEIAGLTSVMSIKLTKNALQVLPEGFFELKALTYLDLSHNQLEQDLSENIGALTGLKELVLSGNKLSRLPNSI 157
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A6G0WJS3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJS3_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 7.420e-7 Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 2
Query: 50 EKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSSV 337
EK WE +L ++DLS N I E+P+ + L ++S K+ +N++SA+P E LG ALK L+LS N+LS LP S+
Sbjct: 68 EKGWECVDLLKIDLSHNDIPEIPSQIGTLKSVISFKICQNKISAIPQELFSLNLLAYLDLSNNCLVGEISPNLGQLQALKELVLSSNKLSALPESL 163
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A0P1ADJ8_PLAHL (Leucine-rich repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADJ8_PLAHL) HSP 1 Score: 58.9 bits (141), Expect = 1.380e-6 Identity = 35/108 (32.41%), Postives = 53/108 (49.07%), Query Frame = 2
Query: 2 PMFTFGVQDGVDAADGEKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRL 325
P F + D +D + E WE L++LDLS+N+I E+P+ V L LV+ K+R N L +P E LG+ + L+ L L GN+L++L
Sbjct: 50 PDEIFRLYDELD--EDENSWECVALKKLDLSYNEIAEIPSQVETLKYLVNFKIRHNLLRQLPTTIWNLEMLTSLDLSSNELEGALPEQLGILIKLRELGLGGNKLTQL 155
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A2P4XSH0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSH0_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.500e-6 Identity = 36/109 (33.03%), Postives = 52/109 (47.71%), Query Frame = 2
Query: 2 PMFTFGVQDGVDAADGEKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLP 328
P F + + +D + E WE LQ+LDLS+N+I E+P+ V L L+S K+R N L +P E LG L+ L L GN+L++LP
Sbjct: 49 PEEVFRLYETLD--EDEHSWECAVLQKLDLSYNEIAEIPSQVETLKYLLSFKIRHNHLRQLPMALWNLETLTSLDLSNNELEGCLSEQLGKLDKLRELGLEGNKLTQLP 155
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Match: A0A3M6VHJ9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHJ9_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.850e-6 Identity = 34/97 (35.05%), Postives = 46/97 (47.42%), Query Frame = 2
Query: 44 DGEKFWEACELQRLDLSFNQITELPAAVSNLSLLVSLKLRKNRLSAVPPEXXXXXXXXXXXXXXXXXRELPEEALGVAVALKGLLLSGNRLSRLPSS 334
+ E WE L++LDLS+N+I ELP+ V L L+S K+R N L +P E LG L+ L L GN L++LP S
Sbjct: 60 EDEHSWECAVLRKLDLSYNEIAELPSQVETLKYLISFKMRHNHLQQLPLALWNLETLTSLDLSNNKLEGCLSEQLGKLYKLRELGLEGNMLTKLPDS 156 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12592.1981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12592.1981.1 >prot_E-fasciculatus_F_contig12592.1981.1 ID=prot_E-fasciculatus_F_contig12592.1981.1|Name=mRNA_E-fasciculatus_F_contig12592.1981.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=139bp PYVYVRGSRWRRRRRRGEVLGGVRAAAARPQLQPDHRAARRGFQPVAPGVback to top mRNA from alignment at E-fasciculatus_F_contig12592:183..2631+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12592.1981.1 ID=mRNA_E-fasciculatus_F_contig12592.1981.1|Name=mRNA_E-fasciculatus_F_contig12592.1981.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2449bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12592:183..2631+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12592:183..2631+ >mRNA_E-fasciculatus_F_contig12592.1981.1 ID=mRNA_E-fasciculatus_F_contig12592.1981.1|Name=mRNA_E-fasciculatus_F_contig12592.1981.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=834bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12592:183..2631+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |