prot_E-fasciculatus_F_contig12590.1980.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12590.1980.1
Unique Nameprot_E-fasciculatus_F_contig12590.1980.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length121
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12590.1980.1 vs. uniprot
Match: A0A6H5JVK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK9_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 8.970e-19
Identity = 72/107 (67.29%), Postives = 74/107 (69.16%), Query Frame = 0 
Query:    1 GDAAAAAXXXGGDASVGTGASGFEGSGEGRRERKSGRSSRKDDAKSADSGGG---GSRHSVSRGXXXXXXXXXXXXVXXXXXXXXXXXXXGVDQNSEKKKRSSSLRK 104
            GDAAAA    GGDASVGTGASGFEGSGEGRR+RKSGRSSRKDDAKS D        S+HSVSR             V     XXXXXX  GVDQNSEKKKRSSSLRK
Sbjct:  381 GDAAAA----GGDASVGTGASGFEGSGEGRRDRKSGRSSRKDDAKSGDGXXXXXXSSKHSVSRAGSRERGSTGASGVMAGSGXXXXXXSSGVDQNSEKKKRSSSLRK 483
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BLAST of mRNA_E-fasciculatus_F_contig12590.1980.1 vs. uniprot
Match: D7FX80_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX80_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 2.120e-5
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 0 
Query:   88 GVDQNSEKKKRSSSLRKMYDSLTGGFSGS 116
            GVDQNSEK   SSSLRKMYDSLTGGFSGS
Sbjct:   14 GVDQNSEKXXXSSSLRKMYDSLTGGFSGS 42
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12590.1980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVK9_9PHAE8.970e-1967.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX80_ECTSI2.120e-589.66Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12590contigE-fasciculatus_F_contig12590:53..3892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12590.1980.1mRNA_E-fasciculatus_F_contig12590.1980.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12590 53..3894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12590.1980.1 ID=prot_E-fasciculatus_F_contig12590.1980.1|Name=mRNA_E-fasciculatus_F_contig12590.1980.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=121bp
GDAAAAAAAAGGDASVGTGASGFEGSGEGRRERKSGRSSRKDDAKSADSG
GGGSRHSVSRGGSRERGSTGASGVMAGSGGSAAGASSGVDQNSEKKKRSS
SLRKMYDSLTGGFSGSAAQNS
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