mRNA_E-fasciculatus_F_contig12532.1947.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: A0A6H5KNT1_9PHAE (Carrier domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNT1_9PHAE) HSP 1 Score: 221 bits (564), Expect = 5.370e-65 Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 1
Query: 1 SALPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGSVR 330
SALPEGNVGEIWVTSKSRAAGYWS+PEKTAEAFGGRLANDGDGPAP AEGS+GH AP DGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGS+R
Sbjct: 420 SALPEGNVGEIWVTSKSRAAGYWSQPEKTAEAFGGRLANDGDGPAPAAEGSVGHGAPVDGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGSLR 529
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: A0A7S1C448_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C448_9STRA) HSP 1 Score: 133 bits (334), Expect = 6.980e-34 Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 7 LPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAE 306
LP+G VGEIW+ S S+A GYW +PEK+A F G LA G ++G G A ADGYL+TGDLGF+++GEL++CGR KDLIIVRGRNHYPQD+ER E
Sbjct: 435 LPDGRVGEIWIDSPSKADGYWGQPEKSAADFHGALAAAGGDGGGESKGGEGRPAAADGYLRTGDLGFVYKGELFVCGRAKDLIIVRGRNHYPQDIERCIE 534
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: F0YID9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YID9_AURAN) HSP 1 Score: 122 bits (307), Expect = 3.160e-30 Identity = 60/110 (54.55%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 1 SALPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGSVR 330
+A +G VGEIW+ S SRA GYW PEK+A FG D G V PA G+L+TGDLGF EGEL++CGR+KDL+IVRG+NHYPQDLE+T E A G+ R
Sbjct: 223 AAAADGAVGEIWLRSPSRARGYWKCPEKSAADFGASRPGDAAATFVPGRARFGDVEPA-GWLRTGDLGFFHEGELFVCGRLKDLLIVRGKNHYPQDLEKTWEDAARGAFR 331
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: A0A7S3GWC0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWC0_9STRA) HSP 1 Score: 121 bits (303), Expect = 7.860e-30 Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 7 LPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGSVR 330
L EG VGEIW+ S S+A GYW++P + F + D P+A A ADGYL+TGDLGFL+ EL+ICGR+KDLIIVRG NHYPQD+ERTAE A A +R
Sbjct: 486 LEEGVVGEIWIASHSKAKGYWNQPVLSLHEFHAHVDRDTANLTPMAA-----AAVADGYLRTGDLGFLYNSELFICGRMKDLIIVRGSNHYPQDIERTAEAAQADYLR 588
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: A0A7S2MW75_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MW75_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.150e-28 Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 7 LPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRL---ANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAV 315
+ GNVGEIWV S S+AAGY+++P++T E F ++ A+D DG AE YLKTGDLGF+++ EL+ICGRIKDLIIV GRN+YPQD+E TA+ AV
Sbjct: 90 VDNGNVGEIWVRSASKAAGYYNKPDETTEDFHAKISKAADDDDGEEGDAE-----------YLKTGDLGFMYKEELFICGRIKDLIIVGGRNYYPQDIEETAQEAV 184
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: UPI001AC8BC9B (Nonribosomal peptide synthetase DhbF n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AC8BC9B) HSP 1 Score: 116 bits (291), Expect = 4.720e-28 Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 22 VGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAE 306
VGEIWV S GYW++PEKTAE FG LA GDGP +L+TGDLGFL EGEL++ GR+KDLII+RGRNHYPQD+E+T E
Sbjct: 410 VGEIWVAGPSVVQGYWNQPEKTAETFGAHLAGTGDGP----------------FLRTGDLGFLHEGELFVTGRLKDLIIIRGRNHYPQDIEQTVE 488
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: A0A7S2HQ97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQ97_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.450e-28 Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 4 ALPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLAN-DGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGSVR 330
AL + VGEIWV S+SRA GYW EKTAE FGG+L + + DG V +G +L+TGDLGF+ EL+ICGR+KDLII+RGRN +PQD+ER E A G +R
Sbjct: 423 ALAQDEVGEIWVRSRSRAEGYWGLEEKTAEDFGGQLVDKEPDGFLEVGSNPMG-------FLRTGDLGFMHNDELFICGRMKDLIIIRGRNIFPQDIERAVEDAFVGKLR 525
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: A0A7S2HQA0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQA0_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.610e-28 Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 4 ALPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLAN-DGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGSVR 330
AL + VGEIWV S+SRA GYW EKTAE FGG+L + + DG V +G +L+TGDLGF+ EL+ICGR+KDLII+RGRN +PQD+ER E A G +R
Sbjct: 423 ALAQDEVGEIWVRSRSRAEGYWGLEEKTAEDFGGQLVDKEPDGFLEVGSNPMG-------FLRTGDLGFMHNDELFICGRMKDLIIIRGRNIFPQDIERAVEDAFVGKLR 525
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: UPI00167AB38C (non-ribosomal peptide synthetase n=1 Tax=Streptomyces finlayi TaxID=67296 RepID=UPI00167AB38C) HSP 1 Score: 115 bits (289), Expect = 8.780e-28 Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 7 LPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERT 300
+P G VGEIW++ +S A GYW+ P KTA+ FG RLA + G A G+L+TGDLG L EGELY+ GR+KDLIIVRGRNHYPQD+E+T
Sbjct: 392 VPAGAVGEIWLSGQSVAQGYWNRPRKTADTFGVRLATEATG-----------AASGTGFLRTGDLGLLHEGELYVTGRLKDLIIVRGRNHYPQDIEQT 478
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Match: A0A5C2CWQ6_9BACT (AMP-dependent synthetase and ligase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A5C2CWQ6_9BACT) HSP 1 Score: 115 bits (288), Expect = 1.210e-27 Identity = 55/102 (53.92%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 16 GNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGSLGHVAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAG 321
G VGEIWV+S+S A GYW PE+T FG RLA G+GP +L+TGDLG++ +GEL++ GR+KDLII+RGRNHYPQD+E TAE + AG
Sbjct: 406 GEVGEIWVSSQSVAGGYWGRPEETERTFGARLAGTGEGP----------------FLRTGDLGYMRDGELFVTGRLKDLIILRGRNHYPQDIELTAERSHAG 491 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12532.1947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12532.1947.1 >prot_E-fasciculatus_F_contig12532.1947.1 ID=prot_E-fasciculatus_F_contig12532.1947.1|Name=mRNA_E-fasciculatus_F_contig12532.1947.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp SALPEGNVGEIWVTSKSRAAGYWSEPEKTAEAFGGRLANDGDGPAPVAEGback to top mRNA from alignment at E-fasciculatus_F_contig12532:2809..3615+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12532.1947.1 ID=mRNA_E-fasciculatus_F_contig12532.1947.1|Name=mRNA_E-fasciculatus_F_contig12532.1947.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=807bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12532:2809..3615+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12532:2809..3615+ >mRNA_E-fasciculatus_F_contig12532.1947.1 ID=mRNA_E-fasciculatus_F_contig12532.1947.1|Name=mRNA_E-fasciculatus_F_contig12532.1947.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12532:2809..3615+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |