mRNA_E-fasciculatus_F_contig12520.1940.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12520.1940.1 vs. uniprot
Match: A0A6H5JCZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ2_9PHAE) HSP 1 Score: 268 bits (685), Expect = 2.300e-81 Identity = 142/192 (73.96%), Postives = 153/192 (79.69%), Query Frame = 1
Query: 1 GYGRTRSLMVMASSPEDTIRANRGDSEDFGRRRRGGKKMXXXXXXXXXXXXXXXXXXXXXXXXAAGMGADGGEAEKAEGPADLDSSNRSSTYSYSLRSDGGDSLTESEKRSRREGATRLLGSVKKGASVVWSKVTSDHPEPLPIDKSLTKEEWRAKHFQLEAARRNDWRTNTMGEQHVYTQILKQQEEKVWN 576
GYGRTRSL +ASSPED IRANRGD EDFGRRR G++ GADGGE EKA PADLDSS+RSSTYS+SLRSDGGDSLTESEKRSRREGATRLLGSVKKGASVVWSKVTSDHPEPLPIDKSLTKEEW+AKH+Q+E ARRNDWRTNTMGEQHVYT++LKQ+EEKVWN
Sbjct: 675 GYGRTRSLTAVASSPEDIIRANRGDIEDFGRRRGRGREKSTKRVFPPIFAAVARRP----------RGADGGEEEKARRPADLDSSSRSSTYSFSLRSDGGDSLTESEKRSRREGATRLLGSVKKGASVVWSKVTSDHPEPLPIDKSLTKEEWKAKHYQMEVARRNDWRTNTMGEQHVYTKVLKQEEEKVWN 856
BLAST of mRNA_E-fasciculatus_F_contig12520.1940.1 vs. uniprot
Match: D7FIS9_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS9_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.450e-51 Identity = 106/146 (72.60%), Postives = 109/146 (74.66%), Query Frame = 1
Query: 1 GYGRTRSLMVMASSPEDTIRANRGDSEDFGRRRRGGKKMXXXXXXXXXXXXXXXXXXXXXXXXAAGMGADGGEAEKAEGPADLDSSNRSSTYSYSLRSDGGDSLTESEKRSRREGATRLLGSVKKGASVVWSKVTSDHPEPLPIDK 438
GYGRTRSL ASSPEDTIRANRGDSEDFGRRR G++ GMGADGGE EKA GPADLDSS+RSS S SLRSDGGDSLTESEKRSRREGATRLLGSVKKGASVVWSKVTSDHPEPLPIDK
Sbjct: 976 GYGRTRSLTAEASSPEDTIRANRGDSEDFGRRR--GREKSMAGRKLGGWRLGKPMTGSRKRGATTGMGADGGEEEKARGPADLDSSSRSSACSCSLRSDGGDSLTESEKRSRREGATRLLGSVKKGASVVWSKVTSDHPEPLPIDK 1119
BLAST of mRNA_E-fasciculatus_F_contig12520.1940.1 vs. uniprot
Match: A0A6H5KT97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT97_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.160e-21 Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 313 TESEKRSRREGATRLLGSVKKGASVVWSKVTSDHPEPLPIDKSLTKEEWRAKHFQLEAARRNDWRTNTMGEQHVYTQILKQQEEKV 570
T SE+R R LLG +KKG VVW K+++DHP+PLPIDK+LTKE+ R KH +LE RRN+W+TN++ EQHV +L+QQEEK+
Sbjct: 478 TGSERRRR-----GLLGGLKKGMGVVWEKISADHPQPLPIDKTLTKEQQRQKHLRLERQRRNEWQTNSVAEQHVLRSVLQQQEEKI 558
BLAST of mRNA_E-fasciculatus_F_contig12520.1940.1 vs. uniprot
Match: D7G224_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G224_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 9.930e-21 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 283 SLRSDGGDSLTESEKRSRREGATR----LLGSVKKGASVVWSKVTSDHPEPLPIDKSLTKEEWRAKHFQLEAARRNDWRTNTMGEQHVYTQILKQQEEKV 570
SL GG ++S + G+ R L G +KKG VVW K+ +DHP+PLPIDK+LTKE+ R KH +LE RRN+W+TN++ EQHV +L+Q+EEKV
Sbjct: 446 SLADTGGSGRSKSYRPQDSTGSERRRRGLFGGLKKGMGVVWEKIAADHPQPLPIDKTLTKEQQRQKHLRLERQRRNEWQTNSVAEQHVLRSVLQQEEEKV 545 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12520.1940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12520.1940.1 >prot_E-fasciculatus_F_contig12520.1940.1 ID=prot_E-fasciculatus_F_contig12520.1940.1|Name=mRNA_E-fasciculatus_F_contig12520.1940.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp MVMASSPEDTIRANRGDSEDFGRRRRGGKKMAGRKLGGWRLGKSMTGARKback to top mRNA from alignment at E-fasciculatus_F_contig12520:248..3921+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12520.1940.1 ID=mRNA_E-fasciculatus_F_contig12520.1940.1|Name=mRNA_E-fasciculatus_F_contig12520.1940.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3674bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12520:248..3921+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12520:248..3921+ >mRNA_E-fasciculatus_F_contig12520.1940.1 ID=mRNA_E-fasciculatus_F_contig12520.1940.1|Name=mRNA_E-fasciculatus_F_contig12520.1940.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1110bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12520:248..3921+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |