mRNA_E-fasciculatus_F_contig1250.1925.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: D7FXR4_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR4_ECTSI) HSP 1 Score: 309 bits (792), Expect = 2.900e-101 Identity = 198/246 (80.49%), Postives = 211/246 (85.77%), Query Frame = 1
Query: 4 ELLRTARNRKGEEQWESATSDYQSYLNNVGVCHQTWHEAADELDECRQKVEEKRAKAAXXXXXXXXXXXXXELLRKARSHKCLGQWESAITDYLHYLNDVGDSHPTSHQVAEELDHCRQEQAKVRASEEKXXXXXXXXXXXXXXXXXXXXXREEGKWGGHYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYNRKLDGEQRTAHNRRYDDFMRRRTAS 741
ELLRTARN K EQWESA +DYQ YLN+VGV H TWHE ADELDECRQKVEEKR KAAXXXXXXXXXXXXXELLRKARSHK QWE AIT YL YLNDVGD HPTS +VA+ELD+CRQEQAKVRA+E XXXXXXXXXXXXXXXXXX R EG GGHYATLWVRSNA +IKEAYRKLALRHHPDKNPG+S+AAR+FRAIN+AYEVLKD+ RR YNRKLD E+R AHNRRYDDFMRRR S
Sbjct: 168 ELLRTARNHKCLEQWESAIADYQRYLNDVGVRHPTWHEVADELDECRQKVEEKRVKAAXXXXXXXXXXXXXELLRKARSHKSSEQWELAITHYLKYLNDVGDGHPTSVEVAQELDYCRQEQAKVRAAE-XXXXXXXXXXXXXXXXXXXEAVRAEGSGGGHYATLWVRSNAPRNKIKEAYRKLALRHHPDKNPGNSDAARQFRAINEAYEVLKDQGTRREYNRKLDDEERLAHNRRYDDFMRRRATS 412
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: D7G5Y3_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y3_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.710e-18 Identity = 74/202 (36.63%), Postives = 89/202 (44.06%), Query Frame = 1
Query: 220 LLRKARSHKCLGQWESAITDYLHYLNDVGDSHPTSHQVAEELDHCRQEQ-----------AKVRASE--------------------------EKXXXXXXXXXXXXXXXXXXXXXREEGKWG----------------GHYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYN 666
LLRKAR HK L QW+ AI DY Y N VG H T + A ELD CR Q A+ RA E + XXXX R G G GHY TL ++S A E+K+AYRKLAL+HHPDKN G+ +A F+ + AYEVL DE+ RR Y+
Sbjct: 217 LLRKARLHKRLSQWDLAIKDYETYRNSVGVLHSTWEEAASELDQCRLSQRRANDEERRREAEARAYERGDYFYGSXXXXXXXXXXXXXHGLFDDXXXXXDDHDPFKFFSGGSSWSRRGRGTGGRSNYDSPPPPGPVPTSGHYTTLGIKSTATTAEVKKAYRKLALQHHPDKNQGNEASANIFKDVTAAYEVLSDEKERRTYD 418
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: A0A1H7YJ09_9FIRM (Molecular chaperone DnaJ n=1 Tax=Candidatus Frackibacter sp. WG12 TaxID=2017977 RepID=A0A1H7YJ09_9FIRM) HSP 1 Score: 78.2 bits (191), Expect = 1.530e-14 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 475 GGHYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYNRKLDGE 684
G +Y+ L VR NA IK+AYRKLAL +HPDKNPGDS A R+F+ I +AYEVL +++R+ Y+ +L+ E
Sbjct: 2 GDYYSILGVRKNANKSTIKKAYRKLALEYHPDKNPGDSEAERKFKKIVKAYEVLSSKQSRKEYDEQLNQE 71
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: X1K1X7_9ZZZZ (J domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1K1X7_9ZZZZ) HSP 1 Score: 78.2 bits (191), Expect = 9.790e-14 Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 481 HYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYN 666
+Y+ L V NA REIK+AYR+LA +HHPD NPGD +A +F+ IN+AYEVL D+E RR Y+
Sbjct: 6 YYSVLGVNKNASQREIKQAYRRLARKHHPDVNPGDKSAEAKFKEINEAYEVLSDKEKRRKYD 67
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: A0A0D3CVD2_BRAOL (J domain-containing protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3CVD2_BRAOL) HSP 1 Score: 79.0 bits (193), Expect = 1.030e-13 Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 469 KWGGHYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYNR 669
+W +Y L V A IK AYRKLAL++HPDKNPG+ A R+F IN AYEVL DEE R +YN+
Sbjct: 4 RWKSYYDVLQVPKGASDEHIKRAYRKLALKYHPDKNPGNDEATRKFADINNAYEVLSDEEKREIYNK 70
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: A0A656KB26_CHLPS (DnaJ domain protein (Fragment) n=3 Tax=Chlamydia TaxID=810 RepID=A0A656KB26_CHLPS) HSP 1 Score: 74.3 bits (181), Expect = 1.340e-13 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 481 HYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYNR 669
+Y L V A P EIK++YRKLA+++HPDKNPGD+ A +RF+ +++AYEVL D + R Y+R
Sbjct: 3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDR 65
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: A0A7Z9H2X3_9BACT (Molecular chaperone DnaJ (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Z9H2X3_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 1.740e-13 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 481 HYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYN 666
+Y L V NA IK+AYRKLAL+HHPDKNPGDS A R+F+ +AY+VL+D E R++Y+
Sbjct: 6 YYDVLGVARNASEDVIKKAYRKLALQHHPDKNPGDSEAERKFKEAAEAYDVLRDAEKRQIYD 67
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: A0A0D6PIA3_9PROT (Chaperone protein DnaJ n=1 Tax=Acidocella aminolytica 101 = DSM 11237 TaxID=1120923 RepID=A0A0D6PIA3_9PROT) HSP 1 Score: 79.3 bits (194), Expect = 1.820e-13 Identity = 35/63 (55.56%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 481 HYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYNR 669
+YA L V +A E+K+AYRKLA++HHPD+NPGD+ A ++F+ IN+AY+VLKDE+ R Y+R
Sbjct: 6 YYAVLMVERSASADELKKAYRKLAMQHHPDRNPGDAKAEQKFKEINEAYDVLKDEDKRAAYDR 68
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: A0A5M6IRL6_9PROT (Chaperone protein DnaJ n=1 Tax=Rhodovastum atsumiense TaxID=504468 RepID=A0A5M6IRL6_9PROT) HSP 1 Score: 79.3 bits (194), Expect = 1.820e-13 Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 481 HYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYNR 669
+YATL V +A ++K+AYRKLA++HHPD+NPGD A RF+ IN+AY+VLKDE+ R Y+R
Sbjct: 6 YYATLGVARDASADDLKKAYRKLAMQHHPDRNPGDKKAEARFKEINEAYDVLKDEQKRAAYDR 68
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Match: A0A3M2EN31_9DEIN (Chaperone protein DnaJ n=2 Tax=Deinococcus-Thermus TaxID=1297 RepID=A0A3M2EN31_9DEIN) HSP 1 Score: 79.0 bits (193), Expect = 2.130e-13 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 481 HYATLWVRSNAQPREIKEAYRKLALRHHPDKNPGDSNAARRFRAINQAYEVLKDEEARRVYNR 669
+YA L V NA P EIK AYR+LAL++HPDKNPGD A RF+ IN+AY VL D E R Y+R
Sbjct: 4 YYAILGVERNASPEEIKRAYRRLALKYHPDKNPGDKEAEERFKQINEAYAVLSDPEKRAQYDR 66 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1250.1925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1250.1925.1 >prot_E-fasciculatus_F_contig1250.1925.1 ID=prot_E-fasciculatus_F_contig1250.1925.1|Name=mRNA_E-fasciculatus_F_contig1250.1925.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp QELLRTARNRKGEEQWESATSDYQSYLNNVGVCHQTWHEAADELDECRQKback to top mRNA from alignment at E-fasciculatus_F_contig1250:16770..19156- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1250.1925.1 ID=mRNA_E-fasciculatus_F_contig1250.1925.1|Name=mRNA_E-fasciculatus_F_contig1250.1925.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2387bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1250:16770..19156- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1250:16770..19156- >mRNA_E-fasciculatus_F_contig1250.1925.1 ID=mRNA_E-fasciculatus_F_contig1250.1925.1|Name=mRNA_E-fasciculatus_F_contig1250.1925.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1488bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1250:16770..19156- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |