mRNA_E-fasciculatus_F_contig12427.1867.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A6H5K4F8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4F8_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.050e-41 Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1
Query: 1 MERTIPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
MER IPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGR LLVAANVPYKRPEDFLCEMVKTDAHMDK++
Sbjct: 99 MERAIPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRRLLVAANVPYKRPEDFLCEMVKTDAHMDKIK 174
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A836C931_9STRA (Eukaryotic rRNA processing n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C931_9STRA) HSP 1 Score: 108 bits (270), Expect = 8.860e-27 Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 7 RTIPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
R +PW ETLT++ +PLELEDVHDDL+REV+FYNNALEAV + + L A +PYKRP DF CEMVK+DAHM K++
Sbjct: 72 RELPWPETLTITGIPLELEDVHDDLQREVAFYNNALEAVNQAKDKLKAEGLPYKRPADFFCEMVKSDAHMAKIK 145
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A7S4DKQ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKQ0_HETAK) HSP 1 Score: 100 bits (250), Expect = 1.400e-24 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 10 TIPWEETLTVSDVPLELE-DVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
T+PW ETL V D+P++ E DVHDDL RE++FY NAL+ VK GR L ANVPY+RPEDF EM+K+DAHMDK++
Sbjct: 69 TLPWPETLIVDDIPVDFEGDVHDDLAREMAFYQNALDGVKLGRKKLRDANVPYQRPEDFFAEMIKSDAHMDKIK 142
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A662Y5X2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5X2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.590e-20 Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 13 IPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
+PW ETL VPLELE VHDDLKREV+FYNNAL +V+ ++ L V YKRP D+ EM+K+DAHM KV+
Sbjct: 101 LPWVETLDTCAVPLELESVHDDLKREVAFYNNALASVRLAKARLAREGVAYKRPGDYFAEMLKSDAHMAKVK 172
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A662X897_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X897_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.960e-20 Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 13 IPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
+PW ETL VPLELE VHDDLKREV+FYNNAL +V+ ++ L V YKRP+D+ EM+K+DAHM KV+
Sbjct: 101 LPWVETLDTCAVPLELESVHDDLKREVAFYNNALASVRLAKARLAREGVAYKRPDDYFAEMLKSDAHMAKVK 172
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A8H7PSK7_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PSK7_MORIS) HSP 1 Score: 90.5 bits (223), Expect = 5.140e-20 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 7 RTIPWEETLTV-SDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
+ +PW E ++V S P+ELEDVHDDLKRE++FY ALEA K GR + AA VP+ RP+DF EMVK+D HM+K++
Sbjct: 67 KDLPWIEIMSVTSSEPIELEDVHDDLKRELAFYQQALEAAKIGREKVKAAGVPFSRPDDFFAEMVKSDEHMEKIR 141
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A8H7PM50_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PM50_9FUNG) HSP 1 Score: 87.8 bits (216), Expect = 5.560e-19 Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 7 RTIPWEETLTVSDV-PLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
+ +PW ET+ V+ P+ELEDVHDDLKRE++FY ALEA K GR + A +P+ RP+D+ EMVK+D HM+K++
Sbjct: 68 KDLPWIETMAVTSTEPIELEDVHDDLKRELAFYQQALEAAKIGREKVKATGLPFTRPDDYFAEMVKSDEHMEKIR 142
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A6A4DK08_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DK08_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 7.000e-19 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 7 RTIPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
+ +PW ETL VPLELE VHDDLKREV+FYNN L +V+ + L V YKRP+D+ EM+K+DAHM KV+
Sbjct: 99 KPLPWVETLDTCAVPLELESVHDDLKREVAFYNNTLASVRLAKDRLKKDGVAYKRPDDYFAEMLKSDAHMAKVK 172
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A3R7JZ98_9STRA (ABC1 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JZ98_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 7.360e-19 Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 4 ERTIPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
++ +PW ETL +V LELE VHDDLKREV+FYNN L AV+ ++ L V YKRP+D+ EM+K+DAHM KV+
Sbjct: 99 DKKLPWVETLDTCEVSLELESVHDDLKREVAFYNNTLAAVRIAKARLAKEGVAYKRPDDYFAEMLKSDAHMAKVK 173
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Match: A0A2P4WVP2_9STRA (rRNA-processing protein EBP2 (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVP2_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.140e-18 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 7 RTIPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKVQ 228
+ +PW ETL V LELE VHDDLKREV+FYNN L V+ ++ L V YKRP+D+ EM+K+DAHM KV+
Sbjct: 97 KPLPWVETLDTCTVSLELESVHDDLKREVAFYNNTLAMVRVAKNRLKKEGVAYKRPDDYFAEMLKSDAHMAKVK 170 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12427.1867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12427.1867.1 >prot_E-fasciculatus_F_contig12427.1867.1 ID=prot_E-fasciculatus_F_contig12427.1867.1|Name=mRNA_E-fasciculatus_F_contig12427.1867.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=88bp MERTIPWEETLTVSDVPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAback to top mRNA from alignment at E-fasciculatus_F_contig12427:60..991- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12427.1867.1 ID=mRNA_E-fasciculatus_F_contig12427.1867.1|Name=mRNA_E-fasciculatus_F_contig12427.1867.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=932bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12427:60..991- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12427:60..991- >mRNA_E-fasciculatus_F_contig12427.1867.1 ID=mRNA_E-fasciculatus_F_contig12427.1867.1|Name=mRNA_E-fasciculatus_F_contig12427.1867.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=528bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12427:60..991- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |