prot_E-fasciculatus_F_contig12420.1863.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12420.1863.1
Unique Nameprot_E-fasciculatus_F_contig12420.1863.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length188
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12420.1863.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 5.110e-89
Identity = 159/164 (96.95%), Postives = 160/164 (97.56%), Query Frame = 0 
Query:    6 LTEAVLPAGEGLDTSSATTGGTGGEGESAKSRPFSPRSDFMASRVRLCSAGSDVTIGTDASRNLHDSGSTSTTAMLTNFAEVTACTANFCFKLDAVSAPGIPEVERQRMEEKLEHYQFKLRIAERKGREAKVAKMHKKIDRMRRQLAGETLGSGDEGEETGMSE 169
            LTEAVLPAGEGLDTSSATTGG  GEGESAKSRPFSPRSDFMASRVRLCSAGSDVTIGTDASRNLHDSGSTSTTA+LTNFAEVTACTANFCFKLDAVSAPGIPEVERQRMEEKLE YQFKLRIAERKGRE KVAKMHKKIDRMRRQLAGETLGSGDEGEETGMSE
Sbjct: 1537 LTEAVLPAGEGLDTSSATTGGXXGEGESAKSRPFSPRSDFMASRVRLCSAGSDVTIGTDASRNLHDSGSTSTTAVLTNFAEVTACTANFCFKLDAVSAPGIPEVERQRMEEKLERYQFKLRIAERKGRETKVAKMHKKIDRMRRQLAGETLGSGDEGEETGMSE 1700
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12420.1863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHH6_ECTSI5.110e-8996.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12420contigE-fasciculatus_F_contig12420:351..3784 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12420.1863.1mRNA_E-fasciculatus_F_contig12420.1863.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12420 351..3786 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12420.1863.1 ID=prot_E-fasciculatus_F_contig12420.1863.1|Name=mRNA_E-fasciculatus_F_contig12420.1863.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=188bp
TTSAALTEAVLPAGEGLDTSSATTGGTGGEGESAKSRPFSPRSDFMASRV
RLCSAGSDVTIGTDASRNLHDSGSTSTTAMLTNFAEVTACTANFCFKLDA
VSAPGIPEVERQRMEEKLEHYQFKLRIAERKGREAKVAKMHKKIDRMRRQ
LAGETLGSGDEGEETGMSESESDSDAELQLRQRTGAGW
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