mRNA_E-fasciculatus_F_contig124.1846.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig124.1846.1
Unique NamemRNA_E-fasciculatus_F_contig124.1846.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: D7FQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ19_ECTSI)

HSP 1 Score: 628 bits (1619), Expect = 1.360e-218
Identity = 315/351 (89.74%), Postives = 329/351 (93.73%), Query Frame = 2 
Query:  254 MSGGVALLVKPA-RRISASICRRLPREACLQPGLRPTTVITPQRYHRNNSSRSRRSGGWDSMPLAPGASILLTVALCSVSADSPAEAGWWPFSNRQPASPFSNTIPRKAKKQRAKAEVQMRKYLAKMRKPVQELMAGLRKGEVSREEYDRRMAVFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRRQRTAVGASSHQD 1303
            MSG    LV+PA R++ AS+CRRLP  A  QPGLR TT +TPQRYHRNNSSR R SGGWDSMPLAPGASILL VALCSVS DSPAEAGWWPFS RQP+SPFSNTIPR+AKKQRAKAEVQMR YLAKMR PVQELMAGLRKGEV+REEYD+RM+VFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRL+SALSPL+EIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNE GTTAG+PQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASD FFDGLDAEWDVE+ILDLDPFPQCFERLFLLRRRQRTAVGASS QD
Sbjct:    1 MSGA---LVRPALRQLPASMCRRLP-PAASQPGLRSTTAVTPQRYHRNNSSRRRPSGGWDSMPLAPGASILLAVALCSVSTDSPAEAGWWPFSKRQPSSPFSNTIPRQAKKQRAKAEVQMRNYLAKMRMPVQELMAGLRKGEVTREEYDKRMSVFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLMSALSPLVEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNERGTTAGMPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDEFFDGLDAEWDVENILDLDPFPQCFERLFLLRRRQRTAVGASSQQD 347
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A0A061SI58_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SI58_9CHLO)

HSP 1 Score: 184 bits (466), Expect = 2.790e-48
Identity = 98/193 (50.78%), Postives = 123/193 (63.73%), Query Frame = 2 
Query:  695 DRRMAVFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRRQR 1273
            +RR+  F DEV+  T  I++GV +   AR RY A++G   ++ EAIR V+  SPLIEIGAG+G WQ  LS  GA +I+FD  A  P           LP +G V  GD   LR HR +TLLL YP  G+MA +CL  Y G+ L+YVGEGRGG NA+D FF  L+AEW  E ++ L PFP  FERLF+LRRR R
Sbjct:  126 ERRLGAFRDEVDQETQIILYGVRER-GARARYMAKYGCAAWSEEAIRAVAGFSPLIEIGAGKGQWQAELSRRGADIIAFDNGAAVPC--------PELPAVGEVRHGDHRELRRHRGRTLLLCYPE-GEMAEQCLELYGGEWLLYVGEGRGGVNATDEFFRRLEAEWVCEQVIQLQPFPGNFERLFVLRRRNR 308
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: F2U2F6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2F6_SALR5)

HSP 1 Score: 177 bits (450), Expect = 2.390e-47
Identity = 89/204 (43.63%), Postives = 135/204 (66.18%), Query Frame = 2 
Query:  674 EVSREEYDRRMAVFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRR--QRTA 1279
            ++SREE+ +++    + + L +  II+G ++   AR++Y A++G  R+T +A+  +++ SPLIEIGAG+GHW + L + G  V++FD         N+S    G   + +V PGD   +  +  +TLLLVYPP  DMAL+C  E+RG+ L+YVGE RGG NA+DAFF+ +D ++D   I DLDPFP+C ERL++LRR+   RTA
Sbjct:   17 DMSREEFQQQLWALRERINLDSQIIIYGTAER-HARQKYLAKYGCARWTEDALNTIASFSPLIEIGAGQGHWAKALRKLGVDVMAFD---------NDSTEQPGTAPVSQVRPGDHTKIGWYPRRTLLLVYPPETDMALQCAQEFRGNYLIYVGEARGGVNANDAFFNHVDEQFDCVHIQDLDPFPRCHERLYVLRRKPEHRTA 210
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A0A250XG93_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XG93_9CHLO)

HSP 1 Score: 181 bits (458), Expect = 1.980e-46
Identity = 88/200 (44.00%), Postives = 127/200 (63.50%), Query Frame = 2 
Query:  671 GEVSREEYDRRMAVFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRRQ 1270
            GE   + +   +     EV+L + +IIFGV D P+AR+ Y   +G  R+T EA++++ + SPLIEIG G GHWQ+ L+  GA V++FD  +  P          G+  +G V  G+E  +R H  +TLLLVYP P DM L CL+EYRG  L+YVGE RGG N ++ FF+ L+ EW  E ++ LDPFP  +E+L++L+R+Q
Sbjct:  185 GERGEKWFQEELRKLEPEVDLQSQKIIFGV-DEPNARKSYLERYGCTRWTEEALQVIKSFSPLIEIGGGHGHWQKALTSIGADVLAFDDGSALP--------VLGMDNVGEVQKGNEKEIRRHPRRTLLLVYPGPTDMGLNCLNEYRGRYLLYVGEPRGGINGNEQFFNELEREWTCERVVPLDPFPDGYEQLYILKRKQ 375
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A0A835Z4B6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B6_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.060e-41
Identity = 96/215 (44.65%), Postives = 122/215 (56.74%), Query Frame = 2 
Query:  734 ATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIE---------IGAGRGHWQRGLSE------AGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTL--------LLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRRQRTAVGASSHQDAS 1309
            AT RI +GV+D   AR RYE + G  R+T  A+   +A SPLIE         + A       G         A A V++FD        G+     A LP +G+V PGDE AL  H D+TL        LLVYPPPGDMALRC+  Y GD +VYVGEGRGG NA +AFF  L+  W VE ++ L+PFP+CFER+F+LRR+ + A    S Q A+
Sbjct:  126 ATQRIAYGVTDD-GARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDN-------GSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPAT 332
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A0A7S1RWX2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWX2_ALECA)

HSP 1 Score: 159 bits (402), Expect = 7.660e-40
Identity = 82/181 (45.30%), Postives = 114/181 (62.98%), Query Frame = 2 
Query:  731 LATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRRQR 1273
            LA HR+++    P + RRR E E+G  ++T  A+    A+SPL+E+GAGRG WQR L+  GA V+++D  ++ PS      T  GL  IG+V  G E  +R H D+ +LLVYP PG MA  CL  Y GDTLVYVGEGRGG N  DAFFD + A+W +     +D  P  +E +++L+R ++
Sbjct:  127 LAAHRLLYPTLSPEELRRRRE-EYGAVKWTEAALHAAVAVSPLVEVGAGRGQWQRALAGLGADVLAYDDMSS-PS------TRLGL--IGQVSQGSEDVVRRHADRAMLLVYPNPGPMAYNCLGNYAGDTLVYVGEGRGGVNGDDAFFDAVSADWKLIRSEPVDRLPGGYEHMYILQRLKK 297
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A0A2R5GST6_9STRA (MFS_1_like domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GST6_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.090e-38
Identity = 93/249 (37.35%), Postives = 146/249 (58.63%), Query Frame = 2 
Query:  545 SPFSNTIPRKAKKQRAKAEVQMRKYLAKMRKPVQELMAGLRKGEVSREEYDRRMAVFNDEVELATHRIIFGVS-DPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGAT-VISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRRQRTAVG 1285
            SPF      K  K R   E ++    A+ R  +  L   + +GE+S  EY   +    + V     R+IFGVS +   AR  Y   +G  +++ +A++ ++AL P++E+GAG G W++ L++     +I++D ++       ++    G      VL G+E  LR HRD+TLLLV PPP +MA +C+  YRGD LVYVGEGRGGA+A   FF+ L+++W+VE I+D+ PF +C+E+ F+L+R+ R   G
Sbjct:  466 SPFMYPELEKGIKVREARERELLDLRARARNRIFLLQERVGRGELSEREYRMEIHKLKEAVNRDAQRLIFGVSPEQAHARDEYLQAYGCVKWSEQAMQKIAALGPIVELGAGYGQWRQELAQQHKVDIIAYDDYSQLYLPSEKAREETG------VLEGNETVLRKHRDRTLLLVCPPPNEMASKCMSAYRGDRLVYVGEGRGGAHADSDFFNTLESKWEVEEIIDVLPFSECYEKCFILKRKPRGWFG 708
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BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A9V137_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V137_MONBE)

HSP 1 Score: 154 bits (388), Expect = 5.090e-38
Identity = 81/196 (41.33%), Postives = 110/196 (56.12%), Query Frame = 2 
Query:  725 VELATHRIIFGVSDPPDARRR----------------YEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRR 1264
             E+    I  G S+P D +R                 Y   +G  R+T  A+ L+   SP++E+GAG+G WQR L+EAGA V++FD         NES        +G+V  GDE  L  +  +TLLLVYPP  DMA R L  Y+G  L+YVGE RGG NA++ FFD L+A+WD     +L PF +C+ERL++ RR
Sbjct:   89 AEMREKFIKLGASEPDDLKRAELYAKFREDVLRDTQAYLDTYGCARWTDSALELIKEFSPIVELGAGQGQWQRALTEAGANVVAFD---------NESSLQPSNQPVGKVYSGDEQKLGWYPYRTLLLVYPPDSDMAQRALDRYKGRYLIYVGEARGGVNANEEFFDTLEADWDCVHRENLAPFSRCYERLYVFRR 275
[Close]
BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A0A7S4Q4L8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q4L8_9DINO)

HSP 1 Score: 151 bits (382), Expect = 2.330e-37
Identity = 75/155 (48.39%), Postives = 100/155 (64.52%), Query Frame = 2 
Query:  731 LATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEW 1195
            L  HR+++    P + R R + EHG  ++T +A+++  A+SPL+E+GAGRG WQ+ L+E GA V+++D         + S  T  L  IG+V  G+E  +R H D+ LLLVYP PG MA +CL  Y GD LVYVGEGRGG N  DAFFD L AEW
Sbjct:  130 LEAHRLLYPGLSPEELRTRRQ-EHGAVKWTEKALQVAVAMSPLLEVGAGRGQWQKALTERGANVLAYD---------DMSSPTVRLGLIGQVNRGNEEVVRRHADRALLLVYPNPGPMARKCLENYAGDALVYVGEGRGGVNGDDAFFDLLSAEW 274
[Close]
BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Match: A0A812YUJ7_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812YUJ7_9DINO)

HSP 1 Score: 149 bits (376), Expect = 1.580e-36
Identity = 82/178 (46.07%), Postives = 107/178 (60.11%), Query Frame = 2 
Query:  740 HRIIFG--VSDPPDARRRYEAEHGNCRYTPEAIRLVSALSPLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGRVLPGD-EHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRR 1264
            HR+++     +  D RRR     GN ++T  A++LV   SPL+E+GAG G WQ  L   GA V +FD  ++ PS   E+ ++  +     V   D E ALR  R +TLLLVYPPPG MA+RCL  Y GD L+YVGEGRGG NA   FFD L   W +E  + LD  P  +E+L+LLRR
Sbjct:  104 HRVMYPSLTREEVDQRRR---TFGNVKWTEAALQLVERFSPLVEVGAGEGQWQSELRRRGADVTAFDDHSS-PSRFGEAKSSRLVVSGADVQQADAEEALRRSRGRTLLLVYPPPGPMAMRCLASYTGDVLLYVGEGRGGVNADGPFFDALSVGWTLEETIGLDTLPGSYEKLYLLRR 277
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig124.1846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ19_ECTSI1.360e-21889.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A061SI58_9CHLO2.790e-4850.78Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
F2U2F6_SALR52.390e-4743.63Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A250XG93_9CHLO1.980e-4644.00Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A835Z4B6_9STRA3.060e-4144.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1RWX2_ALECA7.660e-4045.30Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A2R5GST6_9STRA2.090e-3837.35MFS_1_like domain-containing protein n=1 Tax=Honda... [more]
A9V137_MONBE5.090e-3841.33Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S4Q4L8_9DINO2.330e-3748.39Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A812YUJ7_9DINO1.580e-3646.07Hypothetical protein n=3 Tax=Symbiodinium TaxID=29... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig124contigE-fasciculatus_F_contig124:26955..30719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.9
Seed ortholog evalue1.2e-24
Seed eggNOG ortholog157072.XP_008870195.1
EggNOG OGs2CY15@1,2S189@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_007820.1
Exons3
Model size2488
Cds size1092
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig124.1846.1prot_E-fasciculatus_F_contig124.1846.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig124 28098..30466 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927746.2604158-UTR-E-fasciculatus_F_contig124:26954..280971622927746.2604158-UTR-E-fasciculatus_F_contig124:26954..28097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig124 26955..28097 -
1695995677.0623808-UTR-E-fasciculatus_F_contig124:26954..280971695995677.0623808-UTR-E-fasciculatus_F_contig124:26954..28097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig124 26955..28097 -
1622927746.3047473-UTR-E-fasciculatus_F_contig124:30466..307191622927746.3047473-UTR-E-fasciculatus_F_contig124:30466..30719Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig124 30467..30719 -
1695995677.1095138-UTR-E-fasciculatus_F_contig124:30466..307191695995677.1095138-UTR-E-fasciculatus_F_contig124:30466..30719Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig124 30467..30719 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927746.2713497-CDS-E-fasciculatus_F_contig124:28097..283921622927746.2713497-CDS-E-fasciculatus_F_contig124:28097..28392Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig124 28098..28392 -
1695995677.0724137-CDS-E-fasciculatus_F_contig124:28097..283921695995677.0724137-CDS-E-fasciculatus_F_contig124:28097..28392Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig124 28098..28392 -
1622927746.2824805-CDS-E-fasciculatus_F_contig124:29094..294681622927746.2824805-CDS-E-fasciculatus_F_contig124:29094..29468Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig124 29095..29468 -
1695995677.0810146-CDS-E-fasciculatus_F_contig124:29094..294681695995677.0810146-CDS-E-fasciculatus_F_contig124:29094..29468Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig124 29095..29468 -
1622927746.2929978-CDS-E-fasciculatus_F_contig124:30043..304661622927746.2929978-CDS-E-fasciculatus_F_contig124:30043..30466Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig124 30044..30466 -
1695995677.096601-CDS-E-fasciculatus_F_contig124:30043..304661695995677.096601-CDS-E-fasciculatus_F_contig124:30043..30466Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig124 30044..30466 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig124.1846.1

>prot_E-fasciculatus_F_contig124.1846.1 ID=prot_E-fasciculatus_F_contig124.1846.1|Name=mRNA_E-fasciculatus_F_contig124.1846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=364bp
MSGGVALLVKPARRISASICRRLPREACLQPGLRPTTVITPQRYHRNNSS
RSRRSGGWDSMPLAPGASILLTVALCSVSADSPAEAGWWPFSNRQPASPF
SNTIPRKAKKQRAKAEVQMRKYLAKMRKPVQELMAGLRKGEVSREEYDRR
MAVFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLVSALS
PLIEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNESGTTAGLPQIGR
VLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGA
NASDAFFDGLDAEWDVESILDLDPFPQCFERLFLLRRRQRTAVGASSHQD
ASINLNVTGEANR*
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mRNA from alignment at E-fasciculatus_F_contig124:26955..30719-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig124.1846.1 ID=mRNA_E-fasciculatus_F_contig124.1846.1|Name=mRNA_E-fasciculatus_F_contig124.1846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3765bp|location=Sequence derived from alignment at E-fasciculatus_F_contig124:26955..30719- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGACGATGGGGGCACGCAAATCGCAACACGTGGAGAGGGAGGGAGGGGGT
GCAAAGCGTATGAATGCCAGTCACACAGCAGCACAGCAGTGACACAAACA
ACACAGTAGGCAGACAGAGCCAGGAAGGCTGACGCGGCCTGTGTTGAACC
CTTTCTCTATCCCTGAGACTACTGAGTGTGGGCGGAAGGACCAAGTGCGA
GTTTTTGGATCGGTGCAGGAGCATAAAGGGAGCAAAAAAAACGGCGCAAA
AACATGAGCGGCGGAGTTGCACTGCTGGTGAAACCAGCGCGGCGAATCTC
GGCGTCGATCTGCCGCAGGTTGCCTCGGGAAGCCTGCCTGCAGCCGGGCC
TGCGGCCGACTACGGTAATAACACCTCAACGTTATCATCGGAACAACAGC
AGTAGGAGCAGACGCTCTGGCGGCTGGGACTCGATGCCGCTTGCTCCGGG
AGCGTCCATCCTGCTAACAGTGGCCCTGTGCTCGGTCTCCGCGGATTCGC
CAGCGGAAGCGGGCTGGTGGCCCTTCAGCAACAGGCAGCCTGCGTCGCCG
TTCAGCAATACCATTCCACGGAAGGCAAAGAAGCAGAGAGCCAAGGCCGA
GGTACAGATGAGAAAGTACCTCGCCAAGATGCGAAAGCCGGTTCAAGAGC
TGATGGCCGGGCTTAGGAAGGGGGAGGTGAGAGTACGTGTACTCCTATTT
TTACAAGTAGTCTCGTAAGTCACCTACCACCAGAGATACACACCCCTACT
GGACCGGCTTTCAACGCTCGATTCTCTATACTACAGCGGGCGAGAGTAGC
GGTGCCGAAAGTGGCGGTGTTGGAACCGTCCCATCGAGGGCTTCCCGAGA
ACACATTGGGTTGTGGCATTCCCTCCGTAGTGCAGTAATCGTGCTTTGAA
ATTGGAAATTGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGCAGCT
ATTGAGACACAGCGCCAAGGCTTCTGTCCTACCTTAAAATAAGTGTTTCT
GACGAGGAGGCGGGCACTGCTGTTATATTAGCCTTGCGCTTGGATCCGCC
AAAGTCGGTGCATCAGTCTATACGGTTAGAAGCTCGGTCTCTGAAACCAC
CACAAAGTTGAACGACCATCTGATTCCGCCAGCCGCTGCTCCCGAGACCG
TAGGTGCGCTGCTGTGCCTAGACCAGCCGCCTCCTCCCGGGTTGCGGTCA
ACTTCACGGTTCAATGTTTGAACACCGGTTCACGTACATGCTTCCTCTTA
GGTGAGCCGAGAGGAGTACGACAGGCGAATGGCGGTCTTCAACGACGAGG
TCGAGCTGGCGACCCACCGGATCATCTTCGGCGTGTCTGACCCTCCCGAT
GCTCGTCGTCGATACGAAGCCGAGCACGGGAACTGCCGGTACACCCCGGA
GGCCATCCGGTTGGTGTCGGCATTGTCCCCGTTGATCGAGATCGGCGCGG
GCAGGGGTCACTGGCAGCGCGGGTTATCCGAAGCGGGAGCCACGGTGATC
TCCTTCGACAAGTGGGCGACGACCCCCTCCAGCGGCAACGAGAGTGGCAC
GACAGCAGGCCTGCCCCAAATCGGGAGAGTGCTACCTGGGGATGAGCATG
CCCTTCGCCTCCACCGTGACAAGACGTGAGTTGCTCAGTTCGCCTACACA
AGTACCAAAAAAAAATACGTTGAACATTTGCCGATAGTACATAGACGGCC
GCTAGATTGCCAGGAACGCGATTCGTACGTGTGTTTAGTTAATGGTGTCC
ACCTCCAGTCTCAACCGTGGCAGACGCTTTCCTGGAATATCGAGTGCGAT
TCAACAGCGACAACTTCGAGGTATCTGCGAATGTAGTGAATGGGCATGGG
CCTTGTCTCACGGAGGTATTGTACGTATTTTCAGCAAAGCATTGCAAGGA
TTTTACTTTTAATAGATGGCTGACTCAACCGAGGCAAGCCTTCGCATCAT
GCACATACTCCTGTTGAAGATATCAAGGTTTCTCGAGTTAATCTAACGCC
TCAACATTTTCGACGATGAAAAACTATTATAGTGCGGTGCACGCTCCAAC
TGTTCTCTATGTCTGCATGGATACTCTACAAGTGAACTGGCTTAAACCGG
AAAGACCGGGTATCCGGCTAAACCGAATCCGGTTAAACCGTTATTGCGGA
AGGGTGCCGGGCGTCATTGTGCATCATTTGGGCAGTACAAGCAATACTGG
AATCTATCCAAACCGCTCACGACCGCCGTGTATCTATGTTGAGTAGTTCC
CCTCTGCCCGACAGCACCCATTCATGTGTTTGACTAAACTTGAATCCGTT
GCCTACTTGCTGTTACACTGCAATCAGGCTGCTCCTGGTATACCCCCCGC
CTGGAGACATGGCCTTGCGCTGCCTACACGAGTATAGAGGAGATACCTTA
GTTTACGTTGGGGAGGGGAGGGGCGGAGCCAACGCAAGCGATGCCTTCTT
CGATGGCCTGGATGCGGAGTGGGACGTAGAAAGCATCCTCGACCTTGATC
CCTTCCCCCAGTGCTTCGAACGACTTTTCTTGCTGCGACGTCGACAAAGG
ACTGCTGTGGGGGCCTCATCGCATCAAGATGCATCGATCAACCTAAATGT
CACAGGGGAAGCAAATAGATAGAAGTTTTGTTCTTGCGAGGGTTGAGGGA
TTTCGTCTTTTGAGTTTGTGAAGGAACCTAGCTGCGTTTCCACGCCATTC
ATGGTGTAGGGGTGTCGAGGGTGTGAGTTCCCTGCTGGTGAGTTTCGGAA
GAAAGGAGAGCGCGCGGGTGAAATTCGCAACGTTTGTTTGATCGCAGTTT
CTTGACCTCTGTTTGTGCTTAGTCCAAACTCCCCTATTTAGTAGCGAGGG
CACCTATGCCAGGGACGTGGGTCTAACTCTGTGTGCCGCTGATGTAACGG
CACGCGCCTCCCAAGCCCGCATGAAAACGTGGGGCGAGTCACCGCGCAGC
AAGAACCAGACTTGAGTCGCTGTAGCGAATTTTTTCTGGCCAATACGTTC
ACCAACGGGCATTGGCAGAGTTCGAATAACGTTGTGATGGTTCGCGCGAG
AGTCCCGTTCACCGAAATTCTTCTTTCGGGAAGGAGTCGCCCTAGAAGTT
GCAGTCAGTACAGCGGTGCGTTTTTCTCAGGCAAGGATCAGCTCGGGTAT
CGTTGCCACTTTGCGGGTTGTGCGTGTTGGCCGTTTTTTCCGTCGAAACA
CGCGAAAACGAACCCCAACGCCGCCTCTTTTCTACAAGAGGAGCTCCTCG
CAACGCTTGTTGGCACTTTGTGTTCGGGTCGGCATTGTATTCGTGTTTCA
AAGTTGTTTTAACCTGACATGCCTTGGTTCCAAATACATCATTGGAGAGG
CTCATGCATGCGTGTGTCTTAGTTTGGTGGTTCTTGAGTACAGCAGTAGT
CTGTGATTCCGTGCGGAATGTACGTTAGTCTGATAGAGTAGGGAGGGGGT
GATAGCAGTTCAAGTGTAGTTAGGGGCACATCCTGGGATACACGTGTGTT
TCCGGTACCCTCACGCCGTTGCCCTTCAAGTCTCAAACAAAGAACGCAAG
ATTGTGTTCGAATACACACGCCTTGCCGTTTATTTCGAGAGGCTGTAGGG
TTGGTTATATAAAGTGTATGCAATTGAAAGAGTTTACAGCAGTATTTATT
GGCATTGCTTCCCCAGTCGGCCGGCAAGGAACAGACGCAATACATCAGAA
GAAAGATGTTTTCGCTACGTCGTCAGGAGGAAACGGTTTCAGTCATTGCC
GTTGATGAGATCTCG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig124:26955..30719-

>mRNA_E-fasciculatus_F_contig124.1846.1 ID=mRNA_E-fasciculatus_F_contig124.1846.1|Name=mRNA_E-fasciculatus_F_contig124.1846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2184bp|location=Sequence derived from alignment at E-fasciculatus_F_contig124:26955..30719- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCGGCGGAGTTGCACTGCTGGTGAAACCAGCGCGGCGAATCTCGGC
GTCGATCTGCCGCAGGTTGCCTCGGGAAGCCTGCCTGCAGCCGGGCCTGC
GGCCGACTACGGTAATAACACCTCAACGTTATCATCGGAACAACAGCAGT
AGGAGCAGACGCTCTGGCGGCTGGGACTCGATGCCGCTTGCTCCGGGAGC
GTCCATCCTGCTAACAGTGGCCCTGTGCTCGGTCTCCGCGGATTCGCCAG
CGGAAGCGGGCTGGTGGCCCTTCAGCAACAGGCAGCCTGCGTCGCCGTTC
AGCAATACCATTCCACGGAAGGCAAAGAAGCAGAGAGCCAAGGCCGAGGT
ACAGATGAGAAAGTACCTCGCCAAGATGCGAAAGCCGGTTCAAGAGCTGA
TGGCCGGGCTTAGGAAGGGGGAGATGAGCGGCGGAGTTGCACTGCTGGTG
AAACCAGCGCGGCGAATCTCGGCGTCGATCTGCCGCAGGTTGCCTCGGGA
AGCCTGCCTGCAGCCGGGCCTGCGGCCGACTACGGTAATAACACCTCAAC
GTTATCATCGGAACAACAGCAGTAGGAGCAGACGCTCTGGCGGCTGGGAC
TCGATGCCGCTTGCTCCGGGAGCGTCCATCCTGCTAACAGTGGCCCTGTG
CTCGGTCTCCGCGGATTCGCCAGCGGAAGCGGGCTGGTGGCCCTTCAGCA
ACAGGCAGCCTGCGTCGCCGTTCAGCAATACCATTCCACGGAAGGCAAAG
AAGCAGAGAGCCAAGGCCGAGGTACAGATGAGAAAGTACCTCGCCAAGAT
GCGAAAGCCGGTTCAAGAGCTGATGGCCGGGCTTAGGAAGGGGGAGGTGA
GCCGAGAGGAGTACGACAGGCGAATGGCGGTCTTCAACGACGAGGTCGAG
CTGGCGACCCACCGGATCATCTTCGGCGTGTCTGACCCTCCCGATGCTCG
TCGTCGATACGAAGCCGAGCACGGGAACTGCCGGTACACCCCGGAGGCCA
TCCGGTTGGTGTCGGCATTGTCCCCGTTGATCGAGATCGGCGCGGGCAGG
GGTCACTGGCAGCGCGGGTTATCCGAAGCGGGAGCCACGGTGATCTCCTT
CGACAAGTGGGCGACGACCCCCTCCAGCGGCAACGAGAGTGGCACGACAG
CAGGCCTGCCCCAAATCGGGAGAGTGCTACCTGGGGATGAGCATGCCCTT
CGCCTCCACCGTGACAAGACGTGAGCCGAGAGGAGTACGACAGGCGAATG
GCGGTCTTCAACGACGAGGTCGAGCTGGCGACCCACCGGATCATCTTCGG
CGTGTCTGACCCTCCCGATGCTCGTCGTCGATACGAAGCCGAGCACGGGA
ACTGCCGGTACACCCCGGAGGCCATCCGGTTGGTGTCGGCATTGTCCCCG
TTGATCGAGATCGGCGCGGGCAGGGGTCACTGGCAGCGCGGGTTATCCGA
AGCGGGAGCCACGGTGATCTCCTTCGACAAGTGGGCGACGACCCCCTCCA
GCGGCAACGAGAGTGGCACGACAGCAGGCCTGCCCCAAATCGGGAGAGTG
CTACCTGGGGATGAGCATGCCCTTCGCCTCCACCGTGACAAGACGCTGCT
CCTGGTATACCCCCCGCCTGGAGACATGGCCTTGCGCTGCCTACACGAGT
ATAGAGGAGATACCTTAGTTTACGTTGGGGAGGGGAGGGGCGGAGCCAAC
GCAAGCGATGCCTTCTTCGATGGCCTGGATGCGGAGTGGGACGTAGAAAG
CATCCTCGACCTTGATCCCTTCCCCCAGTGCTTCGAACGACTTTTCTTGC
TGCGACGTCGACAAAGGACTGCTGTGGGGGCCTCATCGCATCAAGATGCA
TCGATCAACCTAAATGTCACAGGGGAAGCAAATAGATAGGCTGCTCCTGG
TATACCCCCCGCCTGGAGACATGGCCTTGCGCTGCCTACACGAGTATAGA
GGAGATACCTTAGTTTACGTTGGGGAGGGGAGGGGCGGAGCCAACGCAAG
CGATGCCTTCTTCGATGGCCTGGATGCGGAGTGGGACGTAGAAAGCATCC
TCGACCTTGATCCCTTCCCCCAGTGCTTCGAACGACTTTTCTTGCTGCGA
CGTCGACAAAGGACTGCTGTGGGGGCCTCATCGCATCAAGATGCATCGAT
CAACCTAAATGTCACAGGGGAAGCAAATAGATAG
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