mRNA_E-fasciculatus_F_contig12264.1750.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: D7FNR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR0_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.800e-99 Identity = 163/171 (95.32%), Postives = 169/171 (98.83%), Query Frame = 1
Query: 121 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSEQG 633
SSAVVTYNVESLVLYLLESGDFQEPTTRRPFS+VQLADLDALAAKAGAKVKGSLV+SYHEGQEKY ERRERREMLVGADRCLGDIVSEML+TIEDNDESHE+AHIYLCTLFPQF+HIFSEMKEADEE+ARQCLEQHIALLRGPPNRPTAKSLSSEQ DLLTACVDFLSEQG
Sbjct: 210 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAAKAGAKVKGSLVQSYHEGQEKYVERRERREMLVGADRCLGDIVSEMLATIEDNDESHEDAHIYLCTLFPQFSHIFSEMKEADEEYARQCLEQHIALLRGPPNRPTAKSLSSEQGDLLTACVDFLSEQG 380
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A6H5L333_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L333_9PHAE) HSP 1 Score: 186 bits (472), Expect = 5.420e-51 Identity = 95/113 (84.07%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 340 MLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKE---------------ADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSEQG 633
MLVG DRCLGDIVSEMLSTIEDND+SHEEAHIYLCTLFPQFAHIFSEMKE ADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQ DLLTACVDFLSEQG
Sbjct: 1 MLVGTDRCLGDIVSEMLSTIEDNDKSHEEAHIYLCTLFPQFAHIFSEMKEVGVPKLGRAGCGYGVADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQGDLLTACVDFLSEQG 113
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A024UQM2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQM2_9STRA) HSP 1 Score: 118 bits (296), Expect = 5.860e-26 Identity = 65/166 (39.16%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 130 VVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSE 627
VV YNV++LV Y+L +G F EP TR PFS L LD+ A AG K + +G K+ + + +R+ L+G +RC G++V+EML IED+D E + + +FP FA +F ++K D E+A QC + ++ LRGPPNRPT + + L +DF+ +
Sbjct: 114 VVVYNVDTLVQYILATGSFAEPETRIPFSDEVLKQLDSAATAAGFKFASVVAAQQQKG--KFEQEKIKRDGLLGLERCTGEVVTEMLHIIEDDDAEEGEMRLVM-DVFPSFADMFGQLKSNDPEYAAQCHKHYMEYLRGPPNRPTV-----DASGLFDVVLDFMKQ 271
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A6G0XFD0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFD0_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.030e-25 Identity = 64/169 (37.87%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 121 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSE 627
+ VV YNV++LV Y+L +GDF EP TR FS L ++D+ A AG K GS+++++ + + K+ + + +R+ L+G +RC G++V+EML IED D E + + +FP FA +F ++K D E+A QC + +I L GPPNRPT +++ L ++F+ +
Sbjct: 109 NGTVVLYNVDTLVQYILATGDFSEPETRLAFSEDILKEIDSTAKAAGFKC-GSVLEAFQQ-KAKFDQMKIKRDGLLGLERCAGEVVTEMLHIIEDEDSEEGEMRLVM-EVFPSFADLFGQLKSNDPEYASQCHKHYIEYLHGPPNRPTV-----DESGLFEVVLEFMKQ 269
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A067CQT9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQT9_SAPPC) HSP 1 Score: 117 bits (293), Expect = 1.290e-25 Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 121 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSE 627
+ +V YN+ESLV Y+L +GDF EP TR PF LA LDA A AG ++ GS V + + + + + + +R+ L+G +RC G++V+EML IED+D E + + +FP FA ++S++K D +A QC + + L+GPPNRPT +++ L +DF+++
Sbjct: 105 NGTIVVYNIESLVQYILATGDFSEPETRLPFPDAMLAQLDAEAKAAGLEL-GS-VAAAKQDKAAFEQLKIKRDGLLGLERCAGEVVTEMLEVIEDDDGEEGEMRLVM-EIFPNFADLYSQLKMNDAAYAAQCHKHFVEYLQGPPNRPTI-----DESGLYHIVLDFMAQ 265
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A6A4ZLR0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZLR0_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.430e-25 Identity = 64/172 (37.21%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 121 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSEQGG 636
+ VV YN+++LV Y+L +G+F EP TR FS L LD A AG K + V + + + + + R +R+ L+G +RC+G++V+EML IED+D E + + +FP FA +FS++K D E+A C + ++ LRGPPNRPT +++ L +DF+ + G
Sbjct: 95 NGTVVVYNIDTLVQYILATGNFSEPETRIAFSDDVLKQLDNAATAAGFKF--ASVVTAQQQRAVFEQERIKRDGLLGLERCMGEVVTEMLHIIEDDDGEEGEMRLVM-DVFPSFADLFSQLKSNDREYASHCHKHYVEYLRGPPNRPTV-----DESGLFGVVLDFMKQMAG 258
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A2D4BJA5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJA5_PYTIN) HSP 1 Score: 117 bits (294), Expect = 1.660e-25 Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 121 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCT-LFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSE 627
+ +VV YNV++LV Y+L +GDF EP TR PF+ L +DA A +A + L Y+ + + E++ +R+ L+G +RC G+ V++ML +ED D EE I L T LFP F+ IF +++ AD+E+A+QC+ A LRGP NRPT ++ + LL + FL +
Sbjct: 130 NGSVVVYNVDTLVQYILATGDFSEPETRIPFTDEDLRRIDAEAKRAKLDERSVLEAKYN--KHVFDEQKVKRDGLLGLERCAGEYVTKMLGVVEDEDA--EEGEIELITVLFPSFSSIFEQIRAADKEYAKQCMNHFKAFLRGPKNRPT-----TDHSGLLPVILSFLED 290
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A1V9ZM66_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM66_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.220e-25 Identity = 63/169 (37.28%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 121 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSE 627
+ VV YN++SLV Y+L +GDF EP TR PF L LD A AG ++ GS+V + + + + + + +R+ L+G +RC G++V+EML IED+D E + + +FP FA ++S++K D ++A QC + +I L+GPPNRPT +++ L ++F+++
Sbjct: 104 NGTVVVYNIDSLVQYILATGDFSEPETRIPFPDEMLRQLDTEATAAGLEL-GSVVAAKQD-KATFEQLKIKRDGLLGLERCAGEVVTEMLQVIEDDDGEDGELRLVM-EIFPNFADLYSQLKMNDPDYAAQCHKHYIEYLQGPPNRPTV-----DESGLYQVVLEFMAQ 264
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A485KK40_9STRA (Aste57867_8354 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK40_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.850e-24 Identity = 63/172 (36.63%), Postives = 100/172 (58.14%), Query Frame = 1
Query: 121 SSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSEQGG 636
+ VV YNV++LV Y+L +G+F EP TR PFS L +DA +G ++ + V + + K+ + +R+ L+G +RC G++V+EMLS IED D E + + +FP FA +F ++K D E+A QC + + L GPPNRPT +++ L +DF+ + G
Sbjct: 101 NGTVVLYNVDTLVQYILATGNFSEPETRIPFSDDILKQIDAEVKSSGLEL--ASVFEAQQQKAKFEALKVKRDGLLGLERCAGEVVTEMLSIIEDEDSEEGEMRLVM-EVFPSFADLFGQLKSNDFEYASQCHKHFVEYLHGPPNRPTV-----DESGLFEVVLDFMKQTAG 264
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Match: A0A8K1CDI6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDI6_PYTOL) HSP 1 Score: 112 bits (280), Expect = 1.380e-23 Identity = 62/170 (36.47%), Postives = 106/170 (62.35%), Query Frame = 1
Query: 118 TSSAVVTYNVESLVLYLLESGDFQEPTTRRPFSVVQLADLDALAAKAGAKVKGSLVKSYHEGQEKYRERRERREMLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEADEEFARQCLEQHIALLRGPPNRPTAKSLSSEQADLLTACVDFLSE 627
++ ++V YNV+SLV Y+L +GDF EP TR PFS L +DA A +A + S++++ H + + E++ +R+ L+G +RC G+ +++ML +E++D E + + TLFP F+ IF +++ AD+E+A+ + A LRGP NRPT + + LL+ + FL +
Sbjct: 137 SNGSIVVYNVDSLVQYILATGDFSEPETRIPFSDDDLRRIDAEAKRAKLDER-SVLEAKH-NKHLFDEQKVKRDGLLGLERCAGEFITQMLEVVENDDPEEGEMQL-IMTLFPSFSSIFEQIRSADKEYAKHSMNHFKAYLRGPKNRPTV-----DNSGLLSVILGFLDD 298 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12264.1750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12264.1750.1 >prot_E-fasciculatus_F_contig12264.1750.1 ID=prot_E-fasciculatus_F_contig12264.1750.1|Name=mRNA_E-fasciculatus_F_contig12264.1750.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=204bp MLVGADRCLGDIVSEMLSTIEDNDESHEEAHIYLCTLFPQFAHIFSEMKEback to top mRNA from alignment at E-fasciculatus_F_contig12264:11..4088- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12264.1750.1 ID=mRNA_E-fasciculatus_F_contig12264.1750.1|Name=mRNA_E-fasciculatus_F_contig12264.1750.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4078bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12264:11..4088- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12264:11..4088- >mRNA_E-fasciculatus_F_contig12264.1750.1 ID=mRNA_E-fasciculatus_F_contig12264.1750.1|Name=mRNA_E-fasciculatus_F_contig12264.1750.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1224bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12264:11..4088- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |