prot_E-fasciculatus_F_contig12251.1743.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12251.1743.1
Unique Nameprot_E-fasciculatus_F_contig12251.1743.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length170
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12251.1743.1 vs. uniprot
Match: D8LSQ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSQ4_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 5.510e-24
Identity = 87/173 (50.29%), Postives = 89/173 (51.45%), Query Frame = 0 
Query:    1 TGSASGCSLEDMPCYSGNSSTAQRPTVPSPSPTEAATTAPVQFDSGREMEGFFTASPTGAPTAYDHRGSSLAGTASPTPAAPIASADGGVEEAPEETRSPVADNDDTESG---AGSGFNSAGTSSGGGDFDGAAE-AGDSAACVAWSAATPVPRAVVTLGVALLLAARNAAAR 169
            TG A GCSLEDMPCYSGNSS AQ                           G                                        EAP  TRSPVA NDDT SG   AGSGFNSAGTSSGGGDFDGAAE AGD AA VAWS AT VPRAVVTLGV L LAAR+AAA+
Sbjct:  180 TGPAFGCSLEDMPCYSGNSSAAQTQPXXXXXXXXXXXXXXXXXXXXXXXXG----------------------------------------EAPAATRSPVAGNDDTGSGGIGAGSGFNSAGTSSGGGDFDGAAEEAGDGAARVAWSTATAVPRAVVTLGVTLFLAARHAAAK 312
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12251.1743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSQ4_ECTSI5.510e-2450.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12251contigE-fasciculatus_F_contig12251:2..511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12251.1743.1mRNA_E-fasciculatus_F_contig12251.1743.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12251 2..511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12251.1743.1 ID=prot_E-fasciculatus_F_contig12251.1743.1|Name=mRNA_E-fasciculatus_F_contig12251.1743.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=170bp
TGSASGCSLEDMPCYSGNSSTAQRPTVPSPSPTEAATTAPVQFDSGREME
GFFTASPTGAPTAYDHRGSSLAGTASPTPAAPIASADGGVEEAPEETRSP
VADNDDTESGAGSGFNSAGTSSGGGDFDGAAEAGDSAACVAWSAATPVPR
AVVTLGVALLLAARNAAAR*
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