prot_E-fasciculatus_F_contig12191.1701.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12191.1701.1
Unique Nameprot_E-fasciculatus_F_contig12191.1701.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length165
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12191.1701.1 vs. uniprot
Match: D7G8E5_ECTSI (Putative retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.840e-22
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 
Query:   75 GAALSALSTAPHPHKPLVSHLPSQKMTDSKRVQDNVNVFLTTVSSPARRPS 125
            GAALSALSTAPHPHKPLVSHLPSQKMTDSKRVQDNVNVFLTTVSSPARRPS
Sbjct: 1141 GAALSALSTAPHPHKPLVSHLPSQKMTDSKRVQDNVNVFLTTVSSPARRPS 1191
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BLAST of mRNA_E-fasciculatus_F_contig12191.1701.1 vs. uniprot
Match: A0A6H5JHA1_9PHAE (RB_A domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 6.620e-20
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0 
Query:   75 GAALSALSTAPHPHKPLVSHLPSQKMTDSKRVQDNVNVFLTTVSSPARRPS 125
            GAALSALST PHP KPLVSHLPSQKMTDSKRVQ+NVNVFLTTVSSPARRPS
Sbjct: 1361 GAALSALSTVPHPLKPLVSHLPSQKMTDSKRVQENVNVFLTTVSSPARRPS 1411
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12191.1701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8E5_ECTSI1.840e-22100.00Putative retinoblastoma n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHA1_9PHAE6.620e-2094.12RB_A domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12191contigE-fasciculatus_F_contig12191:3620..4114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12191.1701.1mRNA_E-fasciculatus_F_contig12191.1701.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12191 3620..4114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12191.1701.1 ID=prot_E-fasciculatus_F_contig12191.1701.1|Name=mRNA_E-fasciculatus_F_contig12191.1701.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=165bp
EEGGNRHLKDEDDVDEGGGGGEKKGRRGRGGAAAGGGGGGKQPVSSSARE
EQASGGGGGGGAGGNGSEDDVVAAGAALSALSTAPHPHKPLVSHLPSQKM
TDSKRVQDNVNVFLTTVSSPARRPSPPPAAAGAVASPSSSRAADGGGGGG
VRGGVGGGRRASAGG
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