prot_E-fasciculatus_F_contig12191.1700.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12191.1700.1
Unique Nameprot_E-fasciculatus_F_contig12191.1700.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length116
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12191.1700.1 vs. uniprot
Match: A0A6H5JHA1_9PHAE (RB_A domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.050e-16
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 
Query:    1 MKQFVLEFKNLAGQQQGVASITTAQDAARVAKRVQSKRSADGITP 45
            MKQFVLEFKNLAGQQQGVASITTAQDAARVAKRVQSKRS +GITP
Sbjct: 1166 MKQFVLEFKNLAGQQQGVASITTAQDAARVAKRVQSKRSGEGITP 1210
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12191.1700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHA1_9PHAE6.050e-1695.56RB_A domain-containing protein n=2 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12191contigE-fasciculatus_F_contig12191:2763..3574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12191.1700.1mRNA_E-fasciculatus_F_contig12191.1700.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12191 2746..3574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12191.1700.1 ID=prot_E-fasciculatus_F_contig12191.1700.1|Name=mRNA_E-fasciculatus_F_contig12191.1700.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=116bp
MKQFVLEFKNLAGQQQGVASITTAQDAARVAKRVQSKRSADGITPPPPPL
APEDAAVSRPTGSEGGGGDGGEEENDARQEAAPAPAPPAHRRSQRRRLTR
SSSTTTGGGGGGGGAS
back to top