prot_E-fasciculatus_F_contig12168.1684.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12168.1684.1
Unique Nameprot_E-fasciculatus_F_contig12168.1684.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length134
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12168.1684.1 vs. uniprot
Match: D8LCI6_ECTSI (zinc_ribbon_16 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI6_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 4.260e-67
Identity = 117/135 (86.67%), Postives = 121/135 (89.63%), Query Frame = 0 
Query:    1 HT-KPLPRCFICLQQIGTLNPETEARRRQFSQLKGGPAGARTSFRGGGSVGCG-HETPGGGXXXXXXXXXXXXALGQQGAPQAALDIWWSWCNVXXXXXXXXHLEDWFAEHDTCGMRGCDCKCTSHDFPIVSRIA 133
            HT KPLPRCFICLQQIGTLNPETEARRRQFSQLKGGPA ART+FRGG  VG G +E  GGGXXXXXXXX    ALGQQGAPQAALDIWWSWCNV XXXXXX HLEDWFAEHDTCG+RGCDCKCTSHDFPIVS+IA
Sbjct:   16 HTLKPLPRCFICLQQIGTLNPETEARRRQFSQLKGGPASARTNFRGGLGVGSGGYEASGGGXXXXXXXXAAAAALGQQGAPQAALDIWWSWCNVCXXXXXXGHLEDWFAEHDTCGVRGCDCKCTSHDFPIVSKIA 150
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BLAST of mRNA_E-fasciculatus_F_contig12168.1684.1 vs. uniprot
Match: A0A6H5KJL9_9PHAE (zinc_ribbon_16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL9_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 5.010e-59
Identity = 107/131 (81.68%), Postives = 110/131 (83.97%), Query Frame = 0 
Query:    4 PLPRCFICLQQIGTLNPETEARRRQFSQLKGGPAGARTSFRGGGSVGCG-HETPGGGXXXXXXXXXXXXALGQQGAPQAALDIWWSWCNVXXXXXXXXHLEDWFAEHDTCGMRGCDCKCTSHDFPIVSRIA 133
            PLPRCFICLQQIGTLNPETEARRRQFSQLK G AGARTS+RGG  VG G HE PG       XXXXXXXALGQQGAPQAALDIWWSWCNV    XX  HLEDWFAEHDTCG+RGCDCKCTSHD PIVS+IA
Sbjct:  352 PLPRCFICLQQIGTLNPETEARRRQFSQLKAGAAGARTSYRGGIGVGSGGHEAPG-------XXXXXXXALGQQGAPQAALDIWWSWCNVCNHGXXNGHLEDWFAEHDTCGVRGCDCKCTSHDLPIVSKIA 475
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12168.1684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCI6_ECTSI4.260e-6786.67zinc_ribbon_16 domain-containing protein n=1 Tax=E... [more]
A0A6H5KJL9_9PHAE5.010e-5981.68zinc_ribbon_16 domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031488WD repeat protein mio, zinc-ribbon like domainPFAMPF17034zinc_ribbon_16coord: 80..123
e-value: 3.9E-10
score: 40.0
IPR037593MIOS/Sea4PANTHERPTHR16453WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBERcoord: 3..127
NoneNo IPR availablePANTHERPTHR16453:SF9GATOR COMPLEX PROTEIN MIOScoord: 3..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12168contigE-fasciculatus_F_contig12168:1953..3216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12168.1684.1mRNA_E-fasciculatus_F_contig12168.1684.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12168 1953..3894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12168.1684.1 ID=prot_E-fasciculatus_F_contig12168.1684.1|Name=mRNA_E-fasciculatus_F_contig12168.1684.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=134bp
HTKPLPRCFICLQQIGTLNPETEARRRQFSQLKGGPAGARTSFRGGGSVG
CGHETPGGGGGRGGAGGGGGAALGQQGAPQAALDIWWSWCNVCNHGGHNG
HLEDWFAEHDTCGMRGCDCKCTSHDFPIVSRIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037593MIOS/Sea4
IPR031488Zn_ribbon_mio