prot_E-fasciculatus_F_contig12066.1612.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12066.1612.1
Unique Nameprot_E-fasciculatus_F_contig12066.1612.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length302
Homology
BLAST of mRNA_E-fasciculatus_F_contig12066.1612.1 vs. uniprot
Match: A0A6H5L9D3_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9D3_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 1.500e-103
Identity = 182/247 (73.68%), Postives = 193/247 (78.14%), Query Frame = 0
Query:    1 MRRLDEGVKAFQRQEAVHGIAPLVFWGEGGVLLPVVPPAQVEARTAPPAIDSNSTDGAMELEREVERQLEEAGKLMRQQNLHLVTAVAVSSHALLRPADVYPPLFHASGNQDDAPASQHTTANALLRPDAFAGAFQPQEEGKADSAPSGFSSRPFAPPLFHTNGNQDDAPALQHTTATALLRPDTFAGASQSQEEGNVDSAPPDFSSRPFAPPLSDTNGNQDDAPALQHTTATALLRPDAFAGVLQS 247
            MRRLD+GVKAFQRQE   G+APLVFWGEGGVLLPVVPPAQV+ART+PPA  SNSTD A+E EREVERQLEEAGKL+RQQN HLVTAVAV S  LLRP  VYPPLFH + +QDDAP SQH    ALLRPDAFAG F+ QEEG  DSAP G S R F PP F TNG+QDDAPA QH  ATALLRPD F GA Q QEE N DSAPP  S R F P L  TNG QDDAPA QHTTATALL  +AFAG  QS
Sbjct:  804 MRRLDDGVKAFQRQENKQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPA--SNSTDDAIEWEREVERQLEEAGKLLRQQNFHLVTAVAVGSCTLLRPGKVYPPLFHTNDHQDDAPTSQHAVTTALLRPDAFAGTFRSQEEGNTDSAPPGLSRRGFYPPPFDTNGSQDDAPASQHA-ATALLRPDAFTGAFQCQEEVNADSAPPGSSRRTFYPLLFHTNGRQDDAPASQHTTATALLGSNAFAGAFQS 1047          
BLAST of mRNA_E-fasciculatus_F_contig12066.1612.1 vs. uniprot
Match: D7FHG2_ECTSI (Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG2_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 2.700e-93
Identity = 156/192 (81.25%), Postives = 166/192 (86.46%), Query Frame = 0
Query:    1 MRRLDEGVKAFQRQEAVHGIAPLVFWGEGGVLLPVVPPAQVEARTAPPAIDSNSTDGAMELEREVERQLEEAGKLMRQQNLHLVTAVAVSSHALLRPADVYPPLFHASGNQDDAPASQHTTANALLRPDAFAGAFQPQEEGKADSAPSGFSSRPFAPPLFHTNGNQDDAPALQHTTATALLRPDTFAGASQS 192
            MRRLD+GVKAFQRQE   G+APLVFWGEGGVLLPVVPPAQV+ART+PPA+DSNSTD  +E +REVERQLEEAGKL+RQQNLHLVTAVAV SHALLRP DVYPPLFH +GNQDDAPASQH    ALLRPDAF GAFQ QEEG ADSAP G S R F P LFHTNG+QDDAPA QHTTATALLRPD FAG  QS
Sbjct:  745 MRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWKREVERQLEEAGKLLRQQNLHLVTAVAVGSHALLRPEDVYPPLFHTNGNQDDAPASQHAATTALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDAPASQHTTATALLRPDAFAGEFQS 936          
BLAST of mRNA_E-fasciculatus_F_contig12066.1612.1 vs. uniprot
Match: A0A6H5JNX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX6_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 1.490e-55
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 0
Query:    1 MRRLDEGVKAFQRQEAVHGIAPLVFWGEGGVLLPVVPPAQVEARTAPPAIDSNSTDGAMELEREVERQLEEAGKLMRQQNLHLVTAVAVSSHALLRPADVYPPLFHASGNQDDAPASQHTTANALLRPDAFAGAFQ 136
            MRRLD+GVKAFQRQE   G+APLVF G GGVLLP VPPA+V+ART+PPA+DSNSTD  +E E EVE QLEEAGKL+RQQNL LVTAVAV S  LLRP +VYPPLFHA+GNQDDA ASQHTTA ALL PD FAGAFQ
Sbjct:  721 MRRLDDGVKAFQRQEKKQGVAPLVFCGGGGVLLPAVPPAEVDARTSPPAVDSNSTDDTIEWEHEVEPQLEEAGKLLRQQNLRLVTAVAVGSCTLLRPGNVYPPLFHANGNQDDATASQHTTAIALLGPDVFAGAFQ 856          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12066.1612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L9D3_9PHAE1.500e-10373.68Cyclin N-terminal domain-containing protein n=1 Ta... [more]
D7FHG2_ECTSI2.700e-9381.25Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JNX6_9PHAE1.490e-5577.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12066contigE-fasciculatus_F_contig12066:3188..4093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12066.1612.1mRNA_E-fasciculatus_F_contig12066.1612.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12066 3188..4093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12066.1612.1 ID=prot_E-fasciculatus_F_contig12066.1612.1|Name=mRNA_E-fasciculatus_F_contig12066.1612.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=302bp
MRRLDEGVKAFQRQEAVHGIAPLVFWGEGGVLLPVVPPAQVEARTAPPAI
DSNSTDGAMELEREVERQLEEAGKLMRQQNLHLVTAVAVSSHALLRPADV
YPPLFHASGNQDDAPASQHTTANALLRPDAFAGAFQPQEEGKADSAPSGF
SSRPFAPPLFHTNGNQDDAPALQHTTATALLRPDTFAGASQSQEEGNVDS
APPDFSSRPFAPPLSDTNGNQDDAPALQHTTATALLRPDAFAGVLQSQEE
GNADSAPSGFSRRTFYPLLFDTNGSQDDAPASQHTTATALLRPDAFAGAF
RS
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