prot_E-fasciculatus_F_contig1206.1607.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1206.1607.1
Unique Nameprot_E-fasciculatus_F_contig1206.1607.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length239
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1206.1607.1 vs. uniprot
Match: D7FGQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGQ0_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 1.910e-119
Identity = 204/239 (85.36%), Postives = 204/239 (85.36%), Query Frame = 0 
Query:    1 MPKRRSFAMVACTTXXXXXXXXXXXXXXXXXXXXXVSPPATALHSSSA-VGRSRGHVSQFQPGSGSFGYKVGLERRGAPAQLLSRTQRRPSRRSQATAMVFGXXXXXXXXXXGFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFLTITVGPILFSAGLNLYNRINLVDAPCPVCGVDLQGLKNKQNQCPSCGAMLLAKDGKFEAVGSGYVRDEAGTQREFSRMGDSGVIDVDAIDVDD 238
            MPKRRSFAMVACTT                      SPPA ALHSS   VGRSRGHVSQFQPGS   GYKVGLERR APA  LSR  RR SRRSQATAMVFGXXXXXXXXXXGFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFLTITVGPILFSAGLNLYNRINLVDAPCPVCGVDLQGLKNKQNQCPSCGAMLLAKDGKFEAVGSGYVRDEAGTQREFSRMGDSGVIDVDAIDVDD
Sbjct:    1 MPKRRSFAMVACTTAVAALMSMQSSTAFVPTTTL-ASPPA-ALHSSRIPVGRSRGHVSQFQPGSDPIGYKVGLERR-APALPLSRAGRRSSRRSQATAMVFGXXXXXXXXXXGFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFLTITVGPILFSAGLNLYNRINLVDAPCPVCGVDLQGLKNKQNQCPSCGAMLLAKDGKFEAVGSGYVRDEAGTQREFSRMGDSGVIDVDAIDVDD 236
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1206.1607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGQ0_ECTSI1.910e-11985.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..238
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.588
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1206contigE-fasciculatus_F_contig1206:7448..10655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1206.1607.1mRNA_E-fasciculatus_F_contig1206.1607.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1206 7313..11504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1206.1607.1 ID=prot_E-fasciculatus_F_contig1206.1607.1|Name=mRNA_E-fasciculatus_F_contig1206.1607.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=239bp
MPKRRSFAMVACTTAAAALMSMQSSTAFVPPTTTLVSPPATALHSSSAVG
RSRGHVSQFQPGSGSFGYKVGLERRGAPAQLLSRTQRRPSRRSQATAMVF
GGGGGGGRGGGGFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFLTITVG
PILFSAGLNLYNRINLVDAPCPVCGVDLQGLKNKQNQCPSCGAMLLAKDG
KFEAVGSGYVRDEAGTQREFSRMGDSGVIDVDAIDVDD*
back to top