prot_E-fasciculatus_F_contig12042.1590.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12042.1590.1
Unique Nameprot_E-fasciculatus_F_contig12042.1590.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length86
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12042.1590.1 vs. uniprot
Match: D7G8G9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8G9_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 4.720e-29
Identity = 57/68 (83.82%), Postives = 60/68 (88.24%), Query Frame = 0 
Query:    1 MEYEYIMSSVAAVLVCVALPVLFGFHNR-VEAAPTTAQEIHWRRRLQHATCGVAVTCGYKWVIRDAWT 67
            M+YEY  SSVAAVLVCV LPVLFG+HNR VE APT AQ +HWRRRLQHATCGVAVTCGYKWVIRDA T
Sbjct:    1 MQYEYNTSSVAAVLVCVGLPVLFGYHNRQVETAPT-AQSVHWRRRLQHATCGVAVTCGYKWVIRDART 67
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12042.1590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8G9_ECTSI4.720e-2983.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..85
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12042contigE-fasciculatus_F_contig12042:2861..3118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12042.1590.1mRNA_E-fasciculatus_F_contig12042.1590.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12042 2768..3608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12042.1590.1 ID=prot_E-fasciculatus_F_contig12042.1590.1|Name=mRNA_E-fasciculatus_F_contig12042.1590.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=86bp
MEYEYIMSSVAAVLVCVALPVLFGFHNRVEAAPTTAQEIHWRRRLQHATC
GVAVTCGYKWVIRDAWTGDTRVYLDWEPLLWLLYE*
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