prot_E-fasciculatus_F_contig12018.1575.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig12018.1575.1
Unique Name	prot_E-fasciculatus_F_contig12018.1575.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	230

Homology

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: D7FQT7_ECTSI (RNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQT7_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 1.020e-135
Identity = 225/232 (96.98%), Postives = 227/232 (97.84%), Query Frame = 0

Query:    1 MVTDEDPANGATAEAEADTNGTXXXXXXXXXXXXXXXXXXXXXXKAKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDRNSA--RGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            MVTDEDPANGATAEAEA+TNGTXXXXXXXXXXXXXXXXXXXXXXKAKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQ STSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRA  DRNSA  RGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPD+VRKV
Sbjct:    1 MVTDEDPANGATAEAEAETNGTXXXXXXXXXXXXXXXXXXXXXXKAKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSANARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKV 232

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: A0A7S3UWI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWI8_HETAK)

HSP 1 Score: 174 bits (440), Expect = 5.490e-51
Identity = 87/183 (47.54%), Postives = 121/183 (66.12%), Query Frame = 0

Query:   49 LSHEEQQKA-DVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDRNSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            +S E  +++ DV GK+FLGG++WQTTED LK +F K+G L D  +M++K TG+PRGFGFVQF+ +++ D  L EEH IDGR +D+K+A+ R+ AP  RA +++   +                   KIFVGGL+Q V + DF+ YF KFG + DAVVM D+ T RSRGFGF+TY   + V +V
Sbjct:    1 MSDERPERSNDVTGKLFLGGVSWQTTEDGLKFYFEKFGKLKDCAVMKDKFTGQPRGFGFVQFEDASAVDKVLAEEHTIDGRVLDIKKAISREHAP--RAISEKIDVK-------------------KIFVGGLEQAVTEGDFKDYFGKFGDITDAVVMMDRNTNRSRGFGFVTYADAESVNRV 162

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: A0A7S3XN27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN27_HETAK)

HSP 1 Score: 171 bits (434), Expect = 3.260e-50
Identity = 88/181 (48.62%), Postives = 120/181 (66.30%), Query Frame = 0

Query:   49 LSHEEQQKA-DVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDRNSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVR 228
            +S E  +++ DV GK+FLGG++WQTTED LK +F K+G L D  +M++K TG+PRGFGFVQF+ +++ D  L EEH IDGR +D+K+A+ R+ AP  RA +++   +                   KIFVGGL+Q V + DF+ YF KFG + DAVVM D+ T RSRGFGF+TY   D VR
Sbjct:    1 MSDERPERSNDVTGKLFLGGVSWQTTEDGLKFYFEKFGKLKDCAVMKDKFTGQPRGFGFVQFEDASAVDKVLAEEHTIDGRVLDIKKAISREHAP--RAISEKIDVK-------------------KIFVGGLEQAVTEGDFKDYFGKFGDITDAVVMMDRNTNRSRGFGFVTY--ADAVR 158

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: A0A2D4CBA9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBA9_PYTIN)

HSP 1 Score: 174 bits (441), Expect = 1.860e-49
Identity = 88/166 (53.01%), Postives = 117/166 (70.48%), Query Frame = 0

Query:   61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDR-APLPRATTDRNSARGGSQVGGRHGGMNDAPL---TNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYD 222
            GK+F+GG++W+TTED L++HFGK+GAL D  LM++K TG+PRGFGFV F  ++  D  L+E HVIDGRT++VKRA+PRD+ AP P      +  RGG   GG HGG   +     + K FVGGL   V + DFR YF ++GK+ DAVVM D+ T RSRGFG +T++
Sbjct:  126 GKLFIGGVSWETTEDGLRSHFGKYGALTDAALMKDKFTGQPRGFGFVTFADASVIDRVLEEAHVIDGRTVEVKRAIPRDKTAPAP------SEHRGGGSGGG-HGGYGRSGTFMESKKXFVGGLAPSVTEQDFRQYFEEYGKITDAVVMIDRDTQRSRGFGXVTFE 284

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: D7FW71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW71_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 7.970e-49
Identity = 89/185 (48.11%), Postives = 120/185 (64.86%), Query Frame = 0

Query:   46 AKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDRNSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            A  ++H++    DVEGK+F+GG++WQTTE+ L+ HFGK+G L D+ LM++K TG PRGFGF++F+  T  D  L +EH IDG+ +DVKRAVP+  AP P + + R +                   TNKIFVGGL   V  A+FR YF  FG V DAVVM+D++T RSRGFGF+T+    VV  +
Sbjct:  135 AGSVAHDKDN--DVEGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAE------------------TNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDI 299

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: A0A8K1C8M2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8M2_PYTOL)

HSP 1 Score: 175 bits (444), Expect = 1.120e-48
Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 0

Query:   61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDR-APLPRATTDRNSARGGSQVGGRHGGMNDAPL---------TNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            GK+F+GG++W+TTED L+ HFGK+GAL D  LM++K TG+PRGFGFV F  +T+ D  L+E HVIDGRT++VKRA+PRD+ AP P             + GG +G                + KIFVGGL   V + DFR YF +FGK+ DAVVM D+ T RSRGFGF+T+D    V +V
Sbjct:   99 GKLFIGGVSWETTEDSLRGHFGKYGALTDAALMKDKFTGQPRGFGFVTFADATAIDRVLEESHVIDGRTVEVKRAIPRDKTAPGP----------SDGRFGGGYGRXXXXXXXXXXXGYTESKKIFVGGLAPSVTEQDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFVTFDEEGAVAEV 268

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: F0XVG7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVG7_AURAN)

HSP 1 Score: 165 bits (418), Expect = 1.600e-48
Identity = 81/174 (46.55%), Postives = 107/174 (61.49%), Query Frame = 0

Query:   57 ADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDRNSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            A  +GK+FLGG+ W T E+ L+ +FG++G + DV +MRNK TG  RGFGFV +      DA L  +HV+DGR +D+K AVPRDRAP                          APL+NK FVGGL   V D +FRGYF +FG++ D++VM D+ T RSRGFGF+TY  P+   +V
Sbjct:    2 AGAQGKLFLGGIAWTTDEEALRHYFGQFGEIIDVAVMRNKATGVSRGFGFVTYARPGCVDAVLGRDHVLDGRRVDIKLAVPRDRAP--------------------------APLSNKFFVGGLPSAVADPEFRGYFEQFGQLTDSIVMVDRGTNRSRGFGFVTYADPEAANRV 149

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: A0A0P1AWA8_PLAHL (Heterogeneous nuclear ribonucleoprotein 1-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWA8_PLAHL)

HSP 1 Score: 171 bits (434), Expect = 1.770e-48
Identity = 84/170 (49.41%), Postives = 118/170 (69.41%), Query Frame = 0

Query:   61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDRNSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            GK+F+GG++W+TTED L+ HFGK+GAL D  LM++K TG+PRGFGFV F  +++ D  L+E H +DGR+++VKRA+PR+R   P ++  R +  G S  G    G+     + KIFVGGL   + + DFR YF +FG++ DAVVM D+ T RSRGFGFIT++    V +V
Sbjct:  127 GKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADASAIDRVLEETHTLDGRSVEVKRAIPRERT-APGSSEFRGARSGYSSNGXXXXGI--FTESKKIFVGGLAPTIAEQDFRHYFEEFGRITDAVVMIDRDTQRSRGFGFITFEDESSVAEV 293

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: A0A7S2XZ50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ50_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.130e-48
Identity = 86/171 (50.29%), Postives = 112/171 (65.50%), Query Frame = 0

Query:   60 EGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDRNSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            EGK+F+GG++WQTTED L+ +F K+G L DV +M++K TG+PRGFGFV F+ ++  +  L + H +DGR +D KRAV R+ +  PR              GG +GG      + KIFVGGL   V + DFRGYF KFG + DAVVM D+ TGRSRGFGF+TYD    VR V
Sbjct:    4 EGKVFIGGVSWQTTEDGLRYYFEKFGELTDVAVMKDKFTGQPRGFGFVTFKDTSVVEKVLGQTHTLDGRQVDCKRAVRREESSAPR--------------GGGYGGE-----SKKIFVGGLAPSVEEDDFRGYFDKFGTITDAVVMMDRNTGRSRGFGFVTYDDESSVRDV 155

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BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Match: A0A225W0H2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W0H2_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.830e-48
Identity = 89/171 (52.05%), Postives = 119/171 (69.59%), Query Frame = 0

Query:   61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDR-APLPRATTDRNSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDVVRKV 230
            GK+F+GG++W+TTED L+ HFGK+G+L D  LM++K TG+PRGFGFV F  +++ D  L E H +DGR+++VKRA+PR+R AP    ++D  S R G   GG  GG  +     KIFVGGL   V + DFR YF +FGK+ DAVVM D+ T RSRGFGFIT++    V +V
Sbjct:  104 GKLFIGGVSWETTEDTLRQHFGKYGSLTDAALMKDKYTGQPRGFGFVTFADASAIDRVLDEAHTLDGRSVEVKRAIPRERTAP---GSSDFRSGRSGFGFGGG-GGFTEQ---KKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEV 267

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig12018.1575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQT7_ECTSI	1.020e-135	96.98	RNA-binding protein, putative n=2 Tax=Ectocarpus T...	[more]
A0A7S3UWI8_HETAK	5.490e-51	47.54	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S3XN27_HETAK	3.260e-50	48.62	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A2D4CBA9_PYTIN	1.860e-49	53.01	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
D7FW71_ECTSI	7.970e-49	48.11	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A8K1C8M2_PYTOL	1.120e-48	50.00	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
F0XVG7_AURAN	1.600e-48	46.55	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A0P1AWA8_PLAHL	1.770e-48	49.41	Heterogeneous nuclear ribonucleoprotein 1-like iso...	[more]
A0A7S2XZ50_9STRA	2.130e-48	50.29	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A225W0H2_9STRA	2.830e-48	52.05	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 174..229 e-value: 7.6E-8 score: 42.1 coord: 62..133 e-value: 8.6E-22 score: 88.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 63..130 e-value: 3.9E-16 score: 58.6 coord: 175..228 e-value: 2.7E-14 score: 52.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 173..230 score: 15.323
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 61..137 score: 17.063
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 142..230 e-value: 1.2E-19 score: 72.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 47..141 e-value: 1.0E-26 score: 95.0
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 162..230 coord: 54..151
None	No IPR available	PANTHER	PTHR11176:SF13	GENE 17190-RELATED	coord: 162..230 coord: 54..151
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 61..165
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 165..229

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig12018	contig	E-fasciculatus_F_contig12018:138..3146 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig12018.1575.1	mRNA_E-fasciculatus_F_contig12018.1575.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig12018 138..3146 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig12018.1575.1 ID=prot_E-fasciculatus_F_contig12018.1575.1|Name=mRNA_E-fasciculatus_F_contig12018.1575.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=230bp
MVTDEDPANGATAEAEADTNGTAETNGTADVTAAADGAPAVEGEKAKELS
HEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGE
PRGFGFVQFQSSTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRATTDR
NSARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVE
DAVVMYDKKTGRSRGFGFITYDSPDVVRKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR037366	BOULE/DAZ
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom