mRNA_E-fasciculatus_F_contig11984.1541.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11984.1541.1
Unique NamemRNA_E-fasciculatus_F_contig11984.1541.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: D8LGJ4_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ4_ECTSI)

HSP 1 Score: 507 bits (1305), Expect = 3.790e-167
Identity = 252/264 (95.45%), Postives = 258/264 (97.73%), Query Frame = 1
Query:    1 LPLQTMTKWVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGNHASEFDRGFTSDTGLRRLDEIKARARAEELSPTPGGYTDVQEVPGPKRDDANHKWKMGPDTLRALNEGVNPGELASMGITEGSDAVPNRSSFAFDHVTAGFGPGASAAQEELRNLVAE 792
            L L+TMTKWVCQA+LDSLTVFFLPLAAY DATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVG+HA EFDRGFTS+TGL+RLDEIKARARAEELSPTPGGYTDVQEV GPKRDDANHKWKMGP+TLRALNEGVNPGELASMGIT GSDAVPNRSSFAFDHVTA FGPGASAAQEELRNLVAE
Sbjct: 1043 LNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGHHAREFDRGFTSETGLQRLDEIKARARAEELSPTPGGYTDVQEVLGPKRDDANHKWKMGPETLRALNEGVNPGELASMGITAGSDAVPNRSSFAFDHVTADFGPGASAAQEELRNLVAE 1306          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: A0A6H5JDL8_9PHAE (PhoLip_ATPase_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL8_9PHAE)

HSP 1 Score: 474 bits (1221), Expect = 3.050e-166
Identity = 237/268 (88.43%), Postives = 248/268 (92.54%), Query Frame = 1
Query:    1 LPLQTMTKWVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGNHASEFDRGFTSDTGLRRLDEIKARARAEELSPTPGGYTDVQEVPGPKRDDANHKWKMGPDTLRALNEGVNPGELASMGITEG----SDAVPNRSSFAFDHVTAGFGPGASAAQEELRNLVAE 792
            L L+TMTKWVCQA+LDSLT+FFLPLAAY DA+TVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFY VA+QLMSR AFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVG+HA EFDRGFTSDTG +RL E K RARAEELSPTPG YTDVQE+ GPKRD  NHKWKMGP+TLRAL+EG+NPGELASMGITEG    SDAVPNRSSFAFDHVTA FGPGAS  QEELRNLVAE
Sbjct:  120 LNLRTMTKWVCQAILDSLTIFFLPLAAYRDASTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYNVAIQLMSRCAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGHHAREFDRGFTSDTGQQRLKEFKDRARAEELSPTPGSYTDVQEISGPKRDVTNHKWKMGPETLRALSEGMNPGELASMGITEGITEGSDAVPNRSSFAFDHVTAAFGPGASTTQEELRNLVAE 387          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: A0A836CHZ9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.540e-47
Identity = 113/277 (40.79%), Postives = 158/277 (57.04%), Query Frame = 1
Query:   25 WVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGNHASEFDRGFTSDTGLRRL------------DEIKARARAEELSPTP-------GGYTDVQEVPGPKRDDANH-KWKMGPDTLRALNEGVNPGE-LASMGITEGSDAVPNRSSFAFDHVTAGFGPGASAAQEELRNLVAE 792
            W+ QAVLDS+ +FF+P+AAY  +  V++  G+ DGLYVFGTTVY+ L++ M++KV  +T TWN    F    S+ L+  F+ +YS  V+YAY+FY V   L+S +AFWL++IQV  V W +D  I  L+  F PTV +HA EF+RG TS  G   L              I++ + AE LS  P       GG     E+    R DA+  +  + PD LR LN+ V PGE L  +GI +G   VP RSS+A+DH     G      +E LR ++ +
Sbjct: 1148 WMAQAVLDSVLIFFIPVAAYGGSEAVFSAAGHHDGLYVFGTTVYSALVLCMLLKVVTITWTWNAVGAFCLAASLLLYVGFVLVYSCFVAYAYEFYGVGFALLSSAAFWLVVIQVAAVVWCVDLFITWLQSRFFPTVSHHAREFNRGLTSPEGKLMLAALATAHDDADLQRIRSASMAE-LSAEPSGNGAGGGGAAPELEISAQLRRDADTGRMVLSPDALRKLNDLV-PGEMLRQLGIEDGGLVVP-RSSYAYDHAETTTGVRTDVGEEVLRRVIVD 1421          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: A0A7S4D8B9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B9_HETAK)

HSP 1 Score: 146 bits (368), Expect = 1.760e-36
Identity = 94/264 (35.61%), Postives = 143/264 (54.17%), Query Frame = 1
Query:    7 LQTMTKWVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGNHASEFDRGFTSDTGLRRLDEIKARARAEELSPTPGGYTD---VQEVPGPKRDDANHKWKMGPDTLRALNEGVNPGELASMGITEGSDAV----------PNR---SSFAFDHVTAGFGPG 750
            L+ M  W+ Q +++S+ +FF+     +    +W   GY DGL+VFGTTVY+ LI  M+MK   +T++W   S FFW+GS+ALF+ FI +Y+     +YDFYYVA  +M R+ +WL+++ +P +T+  D  +  +   F     +HA EFDRG++ D      +E++ R R     P     T+    ++ P P   D   +  +    L+ LN+  +  E   MGIT+ S A           P R   SSFAFDH TA +GPG
Sbjct:  362 LKIMGGWLFQGLVESICLFFIAYGCAHIPVMIWGSDGYDDGLWVFGTTVYSCLIFGMLMKCGFLTSSWTGWSAFFWFGSLALFYLFIVVYTAFSYLSYDFYYVAYVMMERTIYWLLMLLLPAITFLFDAFVYAVRSQFFHNPIDHAMEFDRGYSDDA-----EELERRRRLSTYKPRDRVATEDLLERQTPFPNFFDFI-RVHVNLGALQQLNQTTSREEQKEMGITDTSRAAREASVSRGQSPLRRYDSSFAFDHPTAEYGPG 619          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: W7TGI1_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGI1_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.140e-17
Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 1
Query:    1 LPLQTMTKWVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGNHASEFDR 459
            L ++ M +W  QA+LDS+ +F   L A   A  +W   G   GLY+FGTTVY+ +++A+ +KV  +T TW   SWFF+ GS+ L+  FI  YS + + +  FY VA  +M  +  WL+++    V+ +LD  I  ++  F PT  + A E  R
Sbjct: 1020 LNIRLMVQWFVQALLDSVLIFCFSLFAARSAHEIWGWDGDVAGLYLFGTTVYSVMLLAVSLKVATITYTWTRVSWFFFIGSLLLYLIFIFSYSAMPA-STTFYNVAAHMMRMAPHWLLVLLGSVVSVALDHFIISVKLAFSPTPVDVAVEKSR 1171          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: A0A7R8YW41_HERIL (Phospholipid-transporting ATPase n=16 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8YW41_HERIL)

HSP 1 Score: 72.8 bits (177), Expect = 7.790e-11
Identity = 46/133 (34.59%), Postives = 77/133 (57.89%), Query Frame = 1
Query:   25 WVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLL---VSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEH 414
            W+  A++ S+ +F+LP+ AY + T +W   G   G  V G  VY  +++ + +K   +TN+W + +    WGSIAL+F FI++YS +   + +A  F  +   L S   FWL +I +P  T  LD L+K++E+
Sbjct:  905 WIINALIHSVLLFWLPMLAYKNET-IWGS-GRTGGFLVLGNIVYTYVVITVCLKAGLITNSWTWLTHCSIWGSIALWFIFIAVYSNIWPTLPFAAIFSGMDKILFSSPLFWLGLIIIPVATLLLDVLVKIVEN 1035          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: A0A6J2UDE3_DROLE (Phospholipid-transporting ATPase n=5 Tax=Drosophila lebanonensis TaxID=7225 RepID=A0A6J2UDE3_DROLE)

HSP 1 Score: 71.6 bits (174), Expect = 1.930e-10
Identity = 45/134 (33.58%), Postives = 78/134 (58.21%), Query Frame = 1
Query:   25 WVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLL---VSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHN 417
            W+C A+L S+ +F+LP+ AY  +  +W +    D L + G  VY  +++ + +K   +T++W + +    WGSIAL+FSF+ +YS      ++A +F  + +QL S   FWL +  VP  T  +D + K++ HN
Sbjct: 1069 WICNALLHSVFLFWLPIVAYK-SENIWGDGKTSDYL-MLGNIVYTYVVVTVCLKAGLITSSWTWLTHAAIWGSIALWFSFVLVYSHFWPTFNFATNFAGMDIQLFSTPVFWLGLPLVPITTLLIDVICKLI-HN 1199          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: A0A6J2UG67_DROLE (Phospholipid-transporting ATPase n=1 Tax=Drosophila lebanonensis TaxID=7225 RepID=A0A6J2UG67_DROLE)

HSP 1 Score: 71.6 bits (174), Expect = 1.960e-10
Identity = 45/134 (33.58%), Postives = 78/134 (58.21%), Query Frame = 1
Query:   25 WVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLL---VSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHN 417
            W+C A+L S+ +F+LP+ AY  +  +W +    D L + G  VY  +++ + +K   +T++W + +    WGSIAL+FSF+ +YS      ++A +F  + +QL S   FWL +  VP  T  +D + K++ HN
Sbjct: 1137 WICNALLHSVFLFWLPIVAYK-SENIWGDGKTSDYL-MLGNIVYTYVVVTVCLKAGLITSSWTWLTHAAIWGSIALWFSFVLVYSHFWPTFNFATNFAGMDIQLFSTPVFWLGLPLVPITTLLIDVICKLI-HN 1267          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: A0A0M4EUX7_DROBS (Phospholipid-transporting ATPase n=1 Tax=Drosophila busckii TaxID=30019 RepID=A0A0M4EUX7_DROBS)

HSP 1 Score: 69.7 bits (169), Expect = 8.590e-10
Identity = 44/134 (32.84%), Postives = 79/134 (58.96%), Query Frame = 1
Query:   25 WVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLL---VSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHN 417
            W+  A+L S+ +F+LP+AAY  +  +W++    D L + G  VY  +I+ + +K   +TN+W + +    WGSI L+F+F+ +YS     + +A +F  + +QL+S   FWL +  VP  +  +D + K++ HN
Sbjct: 1095 WIFNALLHSVFLFWLPMAAYQ-SEAIWSDGKTSDYL-LLGNMVYTYVIVTVCLKAGLITNSWTWLTHVAIWGSIVLWFTFVLIYSHFWPSLKFASNFAGMDIQLLSTPIFWLGLFLVPITSLLIDVICKLV-HN 1225          
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Match: UPI00083F3114 (probable phospholipid-transporting ATPase IA isoform X1 n=7 Tax=Drosophila busckii TaxID=30019 RepID=UPI00083F3114)

HSP 1 Score: 69.7 bits (169), Expect = 8.640e-10
Identity = 44/134 (32.84%), Postives = 79/134 (58.96%), Query Frame = 1
Query:   25 WVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLL---VSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHN 417
            W+  A+L S+ +F+LP+AAY  +  +W++    D L + G  VY  +I+ + +K   +TN+W + +    WGSI L+F+F+ +YS     + +A +F  + +QL+S   FWL +  VP  +  +D + K++ HN
Sbjct: 1057 WIFNALLHSVFLFWLPMAAYQ-SEAIWSDGKTSDYL-LLGNMVYTYVIVTVCLKAGLITNSWTWLTHVAIWGSIVLWFTFVLIYSHFWPSLKFASNFAGMDIQLLSTPIFWLGLFLVPITSLLIDVICKLV-HN 1187          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11984.1541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGJ4_ECTSI3.790e-16795.45Phospholipid-transporting ATPase n=1 Tax=Ectocarpu... [more]
A0A6H5JDL8_9PHAE3.050e-16688.43PhoLip_ATPase_C domain-containing protein n=1 Tax=... [more]
A0A836CHZ9_9STRA1.540e-4740.79Phospholipid-transporting ATPase n=1 Tax=Tribonema... [more]
A0A7S4D8B9_HETAK1.760e-3635.61Phospholipid-transporting ATPase (Fragment) n=1 Ta... [more]
W7TGI1_9STRA3.140e-1737.25Phospholipid-transporting ATPase n=2 Tax=Monodopsi... [more]
A0A7R8YW41_HERIL7.790e-1134.59Phospholipid-transporting ATPase n=16 Tax=Hermetia... [more]
A0A6J2UDE3_DROLE1.930e-1033.58Phospholipid-transporting ATPase n=5 Tax=Drosophil... [more]
A0A6J2UG67_DROLE1.960e-1033.58Phospholipid-transporting ATPase n=1 Tax=Drosophil... [more]
A0A0M4EUX7_DROBS8.590e-1032.84Phospholipid-transporting ATPase n=1 Tax=Drosophil... [more]
UPI00083F31148.640e-1032.84probable phospholipid-transporting ATPase IA isofo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11984contigE-fasciculatus_F_contig11984:512..3640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score508.4
Seed ortholog evalue1.9e-141
Seed eggNOG ortholog2880.D8LGJ4
Preferred nameDNF3
KEGG rclassRC00002
KEGG koko:K01509,ko:K01530,ko:K14802
KEGG TC3.A.3.8
KEGG ReactionR00086
KEGG Pathwayko00230,ko04742,map00230,map04742
GOsGO:0000749,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005798,GO:0005802,GO:0005886,GO:0005937,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006886,GO:0006892,GO:0006900,GO:0006996,GO:0008104,GO:0008150,GO:0009987,GO:0010033,GO:0010876,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015914,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019236,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030427,GO:0031136,GO:0031137,GO:0031139,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032456,GO:0033036,GO:0034204,GO:0034613,GO:0042221,GO:0042623,GO:0042886,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043332,GO:0043492,GO:0043900,GO:0043902,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045332,GO:0046907,GO:0046999,GO:0048193,GO:0048194,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051286,GO:0051641,GO:0051649,GO:0051716,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0070867,GO:0070887,GO:0071310,GO:0071444,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:0097708,GO:0098791,GO:0120025,GO:0120038,GO:2000241,GO:2000243
EggNOG free text desc.phospholipid-translocating ATPase activity
EggNOG OGsCOG0474@1,KOG0206@2759
EC3.6.1.3,3.6.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionP-type ATPase, subfamily IV
Ec32 orthologEc-10_001840.1
Exons5
Model size792
Cds size777
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11984.1541.1prot_E-fasciculatus_F_contig11984.1541.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11984 512..3625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927706.6686172-CDS-E-fasciculatus_F_contig11984:511..7061622927706.6686172-CDS-E-fasciculatus_F_contig11984:511..706Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 512..706 -
1695995659.1626887-CDS-E-fasciculatus_F_contig11984:511..7061695995659.1626887-CDS-E-fasciculatus_F_contig11984:511..706Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 512..706 -
1622927706.7117624-CDS-E-fasciculatus_F_contig11984:1347..14961622927706.7117624-CDS-E-fasciculatus_F_contig11984:1347..1496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 1348..1496 -
1695995659.1816523-CDS-E-fasciculatus_F_contig11984:1347..14961695995659.1816523-CDS-E-fasciculatus_F_contig11984:1347..1496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 1348..1496 -
1622927706.7249002-CDS-E-fasciculatus_F_contig11984:2088..21731622927706.7249002-CDS-E-fasciculatus_F_contig11984:2088..2173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 2089..2173 -
1695995659.1916618-CDS-E-fasciculatus_F_contig11984:2088..21731695995659.1916618-CDS-E-fasciculatus_F_contig11984:2088..2173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 2089..2173 -
1622927706.7398558-CDS-E-fasciculatus_F_contig11984:2922..30811622927706.7398558-CDS-E-fasciculatus_F_contig11984:2922..3081Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 2923..3081 -
1695995659.203787-CDS-E-fasciculatus_F_contig11984:2922..30811695995659.203787-CDS-E-fasciculatus_F_contig11984:2922..3081Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 2923..3081 -
1622927706.7575321-CDS-E-fasciculatus_F_contig11984:3436..36251622927706.7575321-CDS-E-fasciculatus_F_contig11984:3436..3625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 3437..3625 -
1695995659.212515-CDS-E-fasciculatus_F_contig11984:3436..36251695995659.212515-CDS-E-fasciculatus_F_contig11984:3436..3625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11984 3437..3625 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927706.7747395-UTR-E-fasciculatus_F_contig11984:3625..36401622927706.7747395-UTR-E-fasciculatus_F_contig11984:3625..3640Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11984 3626..3640 -
1695995659.2243066-UTR-E-fasciculatus_F_contig11984:3625..36401695995659.2243066-UTR-E-fasciculatus_F_contig11984:3625..3640Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11984 3626..3640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11984.1541.1

>prot_E-fasciculatus_F_contig11984.1541.1 ID=prot_E-fasciculatus_F_contig11984.1541.1|Name=mRNA_E-fasciculatus_F_contig11984.1541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=259bp
MTKWVCQAVLDSLTVFFLPLAAYNDATTVWAERGYGDGLYVFGTTVYAGL
IMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYV
AMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGNHASEFDRGF
TSDTGLRRLDEIKARARAEELSPTPGGYTDVQEVPGPKRDDANHKWKMGP
DTLRALNEGVNPGELASMGITEGSDAVPNRSSFAFDHVTAGFGPGASAAQ
EELRNLVAE
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mRNA from alignment at E-fasciculatus_F_contig11984:512..3640-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11984.1541.1 ID=mRNA_E-fasciculatus_F_contig11984.1541.1|Name=mRNA_E-fasciculatus_F_contig11984.1541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3129bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11984:512..3640- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTCCTTTGCAGACGATGACGAAGTGGGTGTGCCAGGCCGTCCTGGACTC GCTGACGGTCTTCTTCCTGCCGCTGGCGGCCTACAACGACGCCACAACGG TGTGGGCGGAGAGGGGGTACGGCGACGGTCTATACGTGTTCGGCACGACC GTATACGCCGGGCTGATCATGGCCATGATGATGAAGGTCTTCAACATGAC CAACGTGAGATTTGTCGCCGATACTGTGTGTGTGCTTCATTATTTCCGGA TGTTTTTGTTTTGCAATTTGTGTTCGTCTGTGTTTGAAAATGGATTGTCT TTGCCGACGTTTTTCGCCCATCTCGCAGCACTCCCCGACCGTTTTTGTTT TTCGTATGGTTTGTGTTTTGTAGCCTGTGATCCCTGCTTCGGGACGATTA TTGCCGTTGTGGGGTACTGGTTGGGTCGATGCCTGTGAACGAAACAAACG CAACAACAACAATACCTGCTCCTGACCACTCACTCCCCTTCCCGATTTTT GTGCGGAACTCCGATCACGGAAACGTGAATGGTATGGTTTTTTCTTTGGC GGAACACAGACATGGAATTATCAGAGCTGGTTCTTCTGGTGGGGATCGAT AGCCCTCTTCTTCTCGTTCATCTCTCTCTACTCTCTCTTGGTGTCATACG CCTACGACTTCTACTACGTGGCCATGCAGCTCATGAGCCGCAGCGCGTTC TGGCTCATCATCATACAGGTGTGTGTATGTGTGTCTTGTGGTGATGTTGA TATTTTTTGTAGCGTTGGGATTGGTGCGGCTGCTGCTACTGCTGCTGCCG CTGCTGCTCCTCCTGATGTTGTCGTTGTTTTCTGGTGCAGCGATAGCAGC CGGTTGTGGTCGAAGGTGCGGTTACTGCGGTTGCTGTTGTTATTTTTGCT TACTGCTGTATGTTGTGTCTGCCGCGCTGCTGCTACTGCTGCTGCTGCTG CTACTGCTGCTGCTGTTTCTGCTACCGTAACCCCGGCTGCGGATGCCGAT GTCGTCGTTTGTTCTCGCTGTAGTCTACTTCGTTTATAGGTGCTGTCGTC GCATAACGACGCAGACAGGCACGTAGGATGTGATTGCGGCTTTTTTTATC CTTTTTTTTTTCTGAGTCGCGTGCGTGGGTAGCGACCGTGTCCTAGTACC ACTCTGATGTCGTTCCGTGTTGGACTGTTTTTTTTTTCATTTCTTCGTGT CCCCCCCTGTCTCTCCATCTTGGTGCACTGCTGTTGTCATGTTCAATCGT TTCCGTCTCTGTCTTTCCCCTCATTCGGCGCTCTTGTTTTTTTTTCAACC TCTCCATCTCTCTGTCCCTCTCTACCTACCCTCCACGTGCGTTCTATCTA CTCGCTTGTTCTGGTAAACGAAGTATTTCGTTATTCGTTGGTTTACCCCC ATCTTGTTTGTCTTGCTCTATCCCCGGCCCTGACGTTTTTTTTTTTGTAT TTTGGTTTTCCGAATAGGTGCCGTGCGTGACATGGTCTTTGGACACCCTC ATCAAGATGCTGGAGCACAACTTCCGCCCAACCGTTGGCAACCACGCCTC AGGTATTACAGCAAACAACGAGAGAACAGCGGACGTACCTTGATACCTCT CGGTTGCTTTCGCTACAATATCTGGCCATTGCTTTGGGTGACTCACCTCG ACCCCCCTCGGAACAGGGCGTTGCTTTGTGCTTTGTACTCATGGCAAGGT AAATGGGCCTCGTTATTTTGACTTTATTTTTTCGCGCAGGGAGCCGACCC AGAAACGAAATTCTCCTAAGGCTGTGGAGTGCGTGTGTTTCTGTGTGTTA TTGCCCCATATTTTGTTTGTGCCGGTCTACACGCCCTGTAGTTGTCTCTC TCTGTACGACTCGCGTTTCGATCAGCAGCGAGAGATCGACCCCCCTGCTT GTGGAACAAGGATGCTACTCCCTATCGGACAAAATATCAATTGTGATGTT GTCCATCTACTGAACGAAGCACACAAAAAATAAAAATTATCGTTGCATGC GCTTGTTGCGTATGAACACATGCAACGCACACGACTCAACTACTGCTGTA CTGCACATTTTTTTGGTTGCCGGTCTTCGTCACACTCCACGTTTTTCTGT TGTTGTGGTGTTGTTGTTGTTGTTGCTGCTGTCTTTGTGTGCAGAGTTCG ACCGGGGCTTCACCTCGGATACCGGGCTGCGGCGGCTCGACGAGATCAAG GCGAGGGCGAGGGCCGAAGAGTTGTCCCCGACCCCCGGCGGTTACACGGA CGTTCAGGAGGTCCCCGGCCCCAAGAGGGATGATGCCAACCATGTCAGTC AGTCAGTCACTCACTCACTCACTCCCGCGGAGCTATTGGCGTGTGCGCCG CTGCTTTTCAAGCAGAGTTGGCGTGTAATCGTGGCGGTTTTGGCAATGGT GCCACATATTATAGCGCTCTTTGCTATAGCGGCAGTCGGTCCGGTTAATG GTCCTTGTGTTGTTGTTGTGATTGTAGTAAAGGGGTTCGGCCGTTAGTGG GGTTTGGTTGAGAGCGGGCGTAATTTTTGAACCGTCTTCAGATGACAGCG GCCCGCGAAGCAAAGATGATGCGTCTTGTTTGTCGTTGTATGGGCAATTG ATGTTGCTGCCGCTTAAATGCGAATGCTAGTATTGTGCAACGTGTGGCGA ACTTAACGACTGCTGTGCTTGTGTATAAGTGTTGTTGGAACGTGACGGAC GGACTGACGCACGATTTTCCACTCACTTCACAATAAACTGATGCGCCAAT GCCTTCCACAAAGTCGAAGCCTTACATCATTACACGGCCAATCGCCGAAC GTACCCACTCACTCATTTTTATCGTACGATTTACTACAATGCACGGTTTG TCAGAAATATTAGACGGCCAATCACGGAACGGATTTTTGTCTTAGTATCC CCCCCCCACCTCCCATCATGGTACGGTTTCTCAGAAATGGAAGATGGGCC CGGATACACTGCGCGCTCTGAACGAGGGCGTGAACCCGGGGGAGCTTGCC TCGATGGGCATCACGGAAGGGTCGGACGCTGTCCCGAACCGCTCTTCCTT CGCCTTCGACCACGTTACTGCGGGCTTCGGGCCCGGCGCCAGCGCTGCCC AGGAGGAGCTCCGCAACCTTGTCGCCGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11984:512..3640-

>mRNA_E-fasciculatus_F_contig11984.1541.1 ID=mRNA_E-fasciculatus_F_contig11984.1541.1|Name=mRNA_E-fasciculatus_F_contig11984.1541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1554bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11984:512..3640- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACGAAGTGGGTGTGCCAGGCCGTCCTGGACTCGCTGACGGTCTTCTT
CCTGCCGCTGGCGGCCTACAACGACGCCACAACGGTGTGGGCGGAGAGGG
GGTACGGCGACGGTCTATACGTGTTCGGCACGACCGTATACGCCGGGCTG
ATCATGGCCATGATGATGAAGGTCTTCAACATGACCAACATGACGAAGTG
GGTGTGCCAGGCCGTCCTGGACTCGCTGACGGTCTTCTTCCTGCCGCTGG
CGGCCTACAACGACGCCACAACGGTGTGGGCGGAGAGGGGGTACGGCGAC
GGTCTATACGTGTTCGGCACGACCGTATACGCCGGGCTGATCATGGCCAT
GATGATGAAGGTCTTCAACATGACCAACACATGGAATTATCAGAGCTGGT
TCTTCTGGTGGGGATCGATAGCCCTCTTCTTCTCGTTCATCTCTCTCTAC
TCTCTCTTGGTGTCATACGCCTACGACTTCTACTACGTGGCCATGCAGCT
CATGAGCCGCAGCGCGTTCTGGCTCATCATCATACAGACATGGAATTATC
AGAGCTGGTTCTTCTGGTGGGGATCGATAGCCCTCTTCTTCTCGTTCATC
TCTCTCTACTCTCTCTTGGTGTCATACGCCTACGACTTCTACTACGTGGC
CATGCAGCTCATGAGCCGCAGCGCGTTCTGGCTCATCATCATACAGGTGC
CGTGCGTGACATGGTCTTTGGACACCCTCATCAAGATGCTGGAGCACAAC
TTCCGCCCAACCGTTGGCAACCACGCCTCAGGTGCCGTGCGTGACATGGT
CTTTGGACACCCTCATCAAGATGCTGGAGCACAACTTCCGCCCAACCGTT
GGCAACCACGCCTCAGAGTTCGACCGGGGCTTCACCTCGGATACCGGGCT
GCGGCGGCTCGACGAGATCAAGGCGAGGGCGAGGGCCGAAGAGTTGTCCC
CGACCCCCGGCGGTTACACGGACGTTCAGGAGGTCCCCGGCCCCAAGAGG
GATGATGCCAACCATAGTTCGACCGGGGCTTCACCTCGGATACCGGGCTG
CGGCGGCTCGACGAGATCAAGGCGAGGGCGAGGGCCGAAGAGTTGTCCCC
GACCCCCGGCGGTTACACGGACGTTCAGGAGGTCCCCGGCCCCAAGAGGG
ATGATGCCAACCATAAATGGAAGATGGGCCCGGATACACTGCGCGCTCTG
AACGAGGGCGTGAACCCGGGGGAGCTTGCCTCGATGGGCATCACGGAAGG
GTCGGACGCTGTCCCGAACCGCTCTTCCTTCGCCTTCGACCACGTTACTG
CGGGCTTCGGGCCCGGCGCCAGCGCTGCCCAGGAGGAGCTCCGCAACCTT
GTCGCCGAGAAATGGAAGATGGGCCCGGATACACTGCGCGCTCTGAACGA
GGGCGTGAACCCGGGGGAGCTTGCCTCGATGGGCATCACGGAAGGGTCGG
ACGCTGTCCCGAACCGCTCTTCCTTCGCCTTCGACCACGTTACTGCGGGC
TTCGGGCCCGGCGCCAGCGCTGCCCAGGAGGAGCTCCGCAACCTTGTCGC
CGAG
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