mRNA_E-fasciculatus_F_contig11955.1525.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11955.1525.1
Unique NamemRNA_E-fasciculatus_F_contig11955.1525.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A150GRG5_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GRG5_GONPE)

HSP 1 Score: 58.9 bits (141), Expect = 4.170e-7
Identity = 43/130 (33.08%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  109 AFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGE-GHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADV 495
            A R +L+ G D N+ D   +  +   +H  T+ N  +++G L+ AGA + AV E G  SPLH +   +A+     L+R GA  +A D    TPLH +A+ +G   +V +LL +G+    ++A+G+  +D+
Sbjct:    3 AIRELLENGVDPNIRDGAPNQGKTPLMHAVTWDNP-ELIGALLGAGASVCAVNEAGGLSPLHYARSATAV---GLLVRAGAPVDAKDERGNTPLH-LAAGKGQFEVVSVLLRAGASENRRNADGKRPSDL 127          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: W6KKL4_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KKL4_9TRYP)

HSP 1 Score: 58.9 bits (141), Expect = 1.040e-6
Identity = 45/150 (30.00%), Postives = 70/150 (46.67%), Query Frame = 1
Query:   67 RPALGVAAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKA----GACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVVGA 504
            +P +  A   G+  A RV+    + G+V+D      R T LH   +    D+   ++ A     A L A   G  +PLH + ++  LE    LL  GA++NA D  ++TPLH  +   G   +V +LL +G+    K+A   T  D   A
Sbjct:   31 KPTIFDACRRGD-GAARVLEYIAKGGSVTDGDEL--RMTMLHHVAYAGNLDLAQAIIAAFPAESAGLDAPDAGGWTPLHYAVDQGHLEMTMLLLEAGANANARDESKRTPLHLASLRGGGTSLVEVLLSNGASKNSKNAANMTPKDCARA 177          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A0B7ABT5_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7ABT5_9EUPU)

HSP 1 Score: 60.5 bits (145), Expect = 1.490e-6
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1
Query:  181 TALHWA---TFTNKADVVGVLVKAGACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVV 498
            +ALH A    +  +  VV +LV+ GA L    + + +PLH++A+++  +    LL+HGA  NA D   QT LHRV   QG +    LL+    DP I    G TAA + 
Sbjct:  226 SALHCAGASPYPKRKQVVELLVRKGANLNDKNKDYLAPLHIAADKAHYDVMDVLLKHGAKVNALDGLGQTALHRVGQ-QGNMQACRLLMSYSIDPSIVSLQGYTAAQLA 333          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A8J5AM61_9DIPT (FYVE-type domain-containing protein n=4 Tax=Bradysia TaxID=35571 RepID=A0A8J5AM61_9DIPT)

HSP 1 Score: 60.8 bits (146), Expect = 1.900e-6
Identity = 46/150 (30.67%), Postives = 65/150 (43.33%), Query Frame = 1
Query:   70 PALGVAAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAV------GEGHE------SPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQT 483
            P L  A +S + D   V++  G D +   P      +T LH A   NK      L+K+   L +       GEG E      SPLH+  E       + L+ HGA+ NA D  ++TPLH          + +LL     D  ++D NGQT
Sbjct:  438 PPLWAALDSDQEDIANVLVKHGVDTDCWSPGPDGCLQTLLHRAIDENKESAAVFLIKSACDLDSPRQLGPNGEGSEEVKSKSSPLHLCCEWGLTRVLQTLIDHGANVNAVDCDKKTPLHVAIENHHDDLITILLCHPSIDLKLRDKNGQT 587          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A6B1AE49_9BACT (Uncharacterized protein n=9 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B1AE49_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 2.150e-6
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query:   85 AAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGE-GHESPLHVSAERSALEAARALLRHGADSNA 360
            AA  G++DA R +L  G D N +         TALHWA    + DV GVL++AGA L+A    G  +PLHV++  +      ALL  GAD+ A
Sbjct:   39 AAMRGDLDAVRSLLAAGADVNAA----RGDGMTALHWAAMKGRPDVAGVLLEAGAALEAGTRLGGHTPLHVASRAAHAPLVEALLAAGADARA 127          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: H2TMD5_TAKRU (SOCS box domain-containing protein n=4 Tax=Takifugu TaxID=31032 RepID=H2TMD5_TAKRU)

HSP 1 Score: 60.1 bits (144), Expect = 2.340e-6
Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 1
Query:   73 ALGVAAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGEGHES-PLHVSAERSA-LEAARALLRHGADSNATDAFRQTPL-HRVASTQGAV----GMVVLLLDSGSDPGIKDANGQTAADVV 498
            AL   AE G + A  ++L  G D N  DP +  +    LH A   N+  +V +LV  GA ++     HES PL +++E S  L     LL  GAD NA D  R+TPL H +AS+ G      G + LLL  G+D      +G+T   ++
Sbjct:   69 ALFKVAERGLLYAAEILLRYGADLNFEDPVSYYN---PLHVAVLRNRPTMVRLLVSHGADIEKRDRIHESSPLDLASEESERLLCLLTLLDMGADVNAGDKHRKTPLLHALASSDGLTVHNTGNIQLLLQRGADISAATQDGETVESLL 214          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A2C9JDF7_BIOGL (Poly [ADP-ribose] polymerase n=3 Tax=Euthyneura TaxID=216307 RepID=A0A2C9JDF7_BIOGL)

HSP 1 Score: 60.1 bits (144), Expect = 3.550e-6
Identity = 40/109 (36.70%), Postives = 57/109 (52.29%), Query Frame = 1
Query:  181 TALHWAT---FTNKADVVGVLVKAGACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVV 498
            TALH A    +  +  VV  L++ GA L    + + +PLH++A+++  +    LL+H A  NA D   QT LHRVA  QG +    LL+    DP I    G TAA + 
Sbjct:  363 TALHCAAASPYPKRKQVVEALLRKGANLNDKNKDYLAPLHIAADKAHYDVMDVLLKHNAKVNALDGLGQTALHRVAQ-QGNMQACRLLMSYAIDPSIVSLQGYTAAQLA 470          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A8J4ZZI8_9CHEL (Palmitoyltransferase n=3 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZZI8_9CHEL)

HSP 1 Score: 59.7 bits (143), Expect = 3.600e-6
Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 1
Query:   85 AAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVG-EGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQT 483
            A + G  +  R ++D G D N  DP       T LHWA+  N+ +VV   +  GA + A+G E   +PLH +  +  L     LL++G D +  D    + +H +A+  G   +V   +  G +  + D NG T
Sbjct:   59 ATQYGIYERCRELIDNGYDVNCRDPENV----TLLHWASINNRKEVVRYYISKGAIIDAIGGELQSTPLHWATRQGHLGVVVILLQYGGDPSIRDGEGCSCIH-LAAQFGHTALVAYFVAKGQNVNLLDRNGMT 187          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A7Y3I6N1_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3I6N1_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 3.900e-6
Identity = 56/184 (30.43%), Postives = 82/184 (44.57%), Query Frame = 1
Query:   85 AAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGE-GHESPLHVSAERSALEAARALLRHGADSNAT---------------------------------DAFR-QTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVVGADVEEDDRSK 531
            AAE G+++A R +L  G D N S         +ALHWA     AD++ VLV AGA L+     G  +PLH+++ R    A +AL+  GA + A                                  D +R +TPL   AS  G +  V +LL +G+DPG   A  Q       A+ + +DR++
Sbjct:   49 AAERGDLEAVRALLRDGADVNASQ----GDGMSALHWAAMNGDADMIEVLVYAGATLEGTTRLGGYTPLHLASHRGLSAAVQALVAAGASTGAMATTXXXXXXXXXXXXXXXXXXXXXXXXGEADVRDGYRGRTPLMFAASA-GHLHAVEILLAAGADPG---ATTQVVDFSARAEADREDRAR 224          
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: UPI001BE749F1 (ankyrin repeat domain-containing protein n=1 Tax=Rhodoferax sp. U11-2br TaxID=2838878 RepID=UPI001BE749F1)

HSP 1 Score: 58.5 bits (140), Expect = 3.960e-6
Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 1
Query:   73 ALGVAAESGEIDAFRVMLDRGED----GNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANG 477
            AL + A  GE+D+ R +L    D    G V  P         L  A       +V +L++ GA + AVG   ++ L  + + + L AA+ALL+ GA + ATD      L  V  T+G   M+ LLLD+G+DP + D NG
Sbjct:  105 ALLMGAREGEMDSARALLRARADVDGRGGVMTP---------LAAAALRGHTQMVQLLLRFGADVNAVGLNEQTALMNAVKLNRLGAAQALLKAGASTRATDRMGDNLLV-VCITEGYPEMLSLLLDNGADPDLADVNG 233          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A150GRG5_GONPE4.170e-733.08Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
W6KKL4_9TRYP1.040e-630.00Uncharacterized protein n=1 Tax=Phytomonas sp. iso... [more]
A0A0B7ABT5_9EUPU1.490e-636.70Uncharacterized protein (Fragment) n=1 Tax=Arion v... [more]
A0A8J5AM61_9DIPT1.900e-630.67FYVE-type domain-containing protein n=4 Tax=Bradys... [more]
A0A6B1AE49_9BACT2.150e-640.86Uncharacterized protein n=9 Tax=Gemmatimonadales b... [more]
H2TMD5_TAKRU2.340e-635.57SOCS box domain-containing protein n=4 Tax=Takifug... [more]
A0A2C9JDF7_BIOGL3.550e-636.70Poly [ADP-ribose] polymerase n=3 Tax=Euthyneura Ta... [more]
A0A8J4ZZI8_9CHEL3.600e-629.85Palmitoyltransferase n=3 Tax=Nymphon striatum TaxI... [more]
A0A7Y3I6N1_9BACT3.900e-630.43Uncharacterized protein n=2 Tax=Gemmatimonadetes b... [more]
UPI001BE749F13.960e-634.53ankyrin repeat domain-containing protein n=1 Tax=R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11955contigE-fasciculatus_F_contig11955:1193..2230 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score78.2
Seed ortholog evalue3.7e-12
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons1
Model size1038
Cds size456
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11955.1525.1prot_E-fasciculatus_F_contig11955.1525.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11955 1313..1768 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927704.824881-UTR-E-fasciculatus_F_contig11955:1192..13121622927704.824881-UTR-E-fasciculatus_F_contig11955:1192..1312Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11955 1193..1312 +
1695995658.2343524-UTR-E-fasciculatus_F_contig11955:1192..13121695995658.2343524-UTR-E-fasciculatus_F_contig11955:1192..1312Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11955 1193..1312 +
1622927704.8504293-UTR-E-fasciculatus_F_contig11955:1768..22301622927704.8504293-UTR-E-fasciculatus_F_contig11955:1768..2230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11955 1769..2230 +
1695995658.253303-UTR-E-fasciculatus_F_contig11955:1768..22301695995658.253303-UTR-E-fasciculatus_F_contig11955:1768..2230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11955 1769..2230 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927704.8374126-CDS-E-fasciculatus_F_contig11955:1312..17681622927704.8374126-CDS-E-fasciculatus_F_contig11955:1312..1768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11955 1313..1768 +
1695995658.2450726-CDS-E-fasciculatus_F_contig11955:1312..17681695995658.2450726-CDS-E-fasciculatus_F_contig11955:1312..1768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11955 1313..1768 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11955.1525.1

>prot_E-fasciculatus_F_contig11955.1525.1 ID=prot_E-fasciculatus_F_contig11955.1525.1|Name=mRNA_E-fasciculatus_F_contig11955.1525.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=152bp
MLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGE
GHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVG
MVVLLLDSGSDPGIKDANGQTAADVVGADVEEDDRSKEEMDVLGRLLASA
P*
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mRNA from alignment at E-fasciculatus_F_contig11955:1193..2230+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11955.1525.1 ID=mRNA_E-fasciculatus_F_contig11955.1525.1|Name=mRNA_E-fasciculatus_F_contig11955.1525.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1038bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11955:1193..2230+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGACAACCGACGAAGCCACCTCGGCTAGAATCAAGGCCACCGAGTGCTG CGCAAACATCATCCGACGACCGGCGCTTGGTGTCGCAGCAGAGTCTGGCG AAATCGACGCCTTCCGTGTGATGCTCGACCGCGGGGAAGACGGGAACGTT TCCGACCCGCCAACCTCGGCACACCGCCGTACCGCCCTGCACTGGGCGAC CTTTACCAATAAGGCCGATGTAGTGGGTGTGCTTGTGAAAGCTGGCGCCT GCTTGCAAGCGGTGGGCGAGGGTCACGAGTCACCCCTTCATGTTTCTGCC GAGAGAAGCGCCCTCGAAGCTGCGCGCGCGCTCTTGAGGCACGGCGCGGA TTCGAATGCCACCGATGCCTTCCGGCAAACGCCACTGCACAGGGTGGCCT CCACCCAAGGTGCGGTGGGCATGGTGGTACTCCTGCTGGACTCAGGTTCA GATCCCGGGATAAAAGACGCAAACGGCCAGACAGCGGCGGATGTTGTCGG GGCCGATGTCGAAGAAGACGATCGGTCAAAGGAGGAGATGGATGTTCTGG GCCGGCTGCTGGCAAGCGCACCGTAGCGAGGGATGACAGTGCTTAGATTC GATAGTCCATGTATTGAGGGGCACCGAGGGGCCTACGTGTTGAGGTCCCC GGAGACCCGGAGGTAGGCTGTGCTCGGAGCAACATTCTTATTCTTTTTCG GCGGCCGTGTTTGATGTCGGAACCCGCGCACCGGCGACGACATTATTGCT TGTGTAAACGCCGTTGTCCTTCTCCCTTTAACTGAGAAAGCGACTGCCCT CTACTGGCTGTCGTTCAAAACCCGTTTTGGGGCGGCGATATTTGGTGTCG GAACCAGTGAAGGGGGTGGCTGAAGCAGTAGGACGGGCACACTTTGAGAA AGGAGACACTGAACGATATTTATCATTTACGCTATTTAGTTCTACCGACG AAGGTATTGTTTGTATTGAAACGCCGTTTATTCTTCGCACGTTGTCTGCG AAAGCGACTCCCCGTGATTGGCTGCCGTGTTCAGGGAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11955:1193..2230+

>mRNA_E-fasciculatus_F_contig11955.1525.1 ID=mRNA_E-fasciculatus_F_contig11955.1525.1|Name=mRNA_E-fasciculatus_F_contig11955.1525.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=912bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11955:1193..2230+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTCGACCGCGGGGAAGACGGGAACGTTTCCGACCCGCCAACCTCGGC
ACACCGCCGTACCGCCCTGCACTGGGCGACCTTTACCAATAAGGCCGATG
TAGTGGGTGTGCTTGTGAAAGCTGGCGCCTGCTTGCAAGCGGTGGGCGAG
GGTCACGAGTCACCCCTTCATGTTTCTGCCGAGAGAAGCGCCCTCGAAGC
TGCGCGCGCGCTCTTGAGGCACGGCGCGGATTCGAATGCCACCGATGCCT
TCCGGCAAACGCCACTGCACAGGGTGGCCTCCACCCAAGGTGCGGTGGGC
ATGGTGGTACTCCTGCTGGACTCAGGTTCAGATCCCGGGATAAAAGACGC
AAACGGCCAGACAGCGGCGGATGTTGTCGGGGCCGATGTCGAAGAAGACG
ATCGGTCAAAGGAGGAGATGGATGTTCTGGGCCGGCTGCTGGCAAGCGCA
CCGTAGATGCTCGACCGCGGGGAAGACGGGAACGTTTCCGACCCGCCAAC
CTCGGCACACCGCCGTACCGCCCTGCACTGGGCGACCTTTACCAATAAGG
CCGATGTAGTGGGTGTGCTTGTGAAAGCTGGCGCCTGCTTGCAAGCGGTG
GGCGAGGGTCACGAGTCACCCCTTCATGTTTCTGCCGAGAGAAGCGCCCT
CGAAGCTGCGCGCGCGCTCTTGAGGCACGGCGCGGATTCGAATGCCACCG
ATGCCTTCCGGCAAACGCCACTGCACAGGGTGGCCTCCACCCAAGGTGCG
GTGGGCATGGTGGTACTCCTGCTGGACTCAGGTTCAGATCCCGGGATAAA
AGACGCAAACGGCCAGACAGCGGCGGATGTTGTCGGGGCCGATGTCGAAG
AAGACGATCGGTCAAAGGAGGAGATGGATGTTCTGGGCCGGCTGCTGGCA
AGCGCACCGTAG
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