mRNA_E-fasciculatus_F_contig11955.1525.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A150GRG5_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GRG5_GONPE) HSP 1 Score: 58.9 bits (141), Expect = 4.170e-7 Identity = 43/130 (33.08%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 109 AFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGE-GHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADV 495
A R +L+ G D N+ D + + +H T+ N +++G L+ AGA + AV E G SPLH + +A+ L+R GA +A D TPLH +A+ +G +V +LL +G+ ++A+G+ +D+
Sbjct: 3 AIRELLENGVDPNIRDGAPNQGKTPLMHAVTWDNP-ELIGALLGAGASVCAVNEAGGLSPLHYARSATAV---GLLVRAGAPVDAKDERGNTPLH-LAAGKGQFEVVSVLLRAGASENRRNADGKRPSDL 127
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: W6KKL4_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KKL4_9TRYP) HSP 1 Score: 58.9 bits (141), Expect = 1.040e-6 Identity = 45/150 (30.00%), Postives = 70/150 (46.67%), Query Frame = 1
Query: 67 RPALGVAAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKA----GACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVVGA 504
+P + A G+ A RV+ + G+V+D R T LH + D+ ++ A A L A G +PLH + ++ LE LL GA++NA D ++TPLH + G +V +LL +G+ K+A T D A
Sbjct: 31 KPTIFDACRRGD-GAARVLEYIAKGGSVTDGDEL--RMTMLHHVAYAGNLDLAQAIIAAFPAESAGLDAPDAGGWTPLHYAVDQGHLEMTMLLLEAGANANARDESKRTPLHLASLRGGGTSLVEVLLSNGASKNSKNAANMTPKDCARA 177
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A0B7ABT5_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7ABT5_9EUPU) HSP 1 Score: 60.5 bits (145), Expect = 1.490e-6 Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 181 TALHWA---TFTNKADVVGVLVKAGACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVV 498
+ALH A + + VV +LV+ GA L + + +PLH++A+++ + LL+HGA NA D QT LHRV QG + LL+ DP I G TAA +
Sbjct: 226 SALHCAGASPYPKRKQVVELLVRKGANLNDKNKDYLAPLHIAADKAHYDVMDVLLKHGAKVNALDGLGQTALHRVGQ-QGNMQACRLLMSYSIDPSIVSLQGYTAAQLA 333
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A8J5AM61_9DIPT (FYVE-type domain-containing protein n=4 Tax=Bradysia TaxID=35571 RepID=A0A8J5AM61_9DIPT) HSP 1 Score: 60.8 bits (146), Expect = 1.900e-6 Identity = 46/150 (30.67%), Postives = 65/150 (43.33%), Query Frame = 1
Query: 70 PALGVAAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAV------GEGHE------SPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQT 483
P L A +S + D V++ G D + P +T LH A NK L+K+ L + GEG E SPLH+ E + L+ HGA+ NA D ++TPLH + +LL D ++D NGQT
Sbjct: 438 PPLWAALDSDQEDIANVLVKHGVDTDCWSPGPDGCLQTLLHRAIDENKESAAVFLIKSACDLDSPRQLGPNGEGSEEVKSKSSPLHLCCEWGLTRVLQTLIDHGANVNAVDCDKKTPLHVAIENHHDDLITILLCHPSIDLKLRDKNGQT 587
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A6B1AE49_9BACT (Uncharacterized protein n=9 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B1AE49_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 2.150e-6 Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 85 AAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGE-GHESPLHVSAERSALEAARALLRHGADSNA 360
AA G++DA R +L G D N + TALHWA + DV GVL++AGA L+A G +PLHV++ + ALL GAD+ A
Sbjct: 39 AAMRGDLDAVRSLLAAGADVNAA----RGDGMTALHWAAMKGRPDVAGVLLEAGAALEAGTRLGGHTPLHVASRAAHAPLVEALLAAGADARA 127
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: H2TMD5_TAKRU (SOCS box domain-containing protein n=4 Tax=Takifugu TaxID=31032 RepID=H2TMD5_TAKRU) HSP 1 Score: 60.1 bits (144), Expect = 2.340e-6 Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 73 ALGVAAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGEGHES-PLHVSAERSA-LEAARALLRHGADSNATDAFRQTPL-HRVASTQGAV----GMVVLLLDSGSDPGIKDANGQTAADVV 498
AL AE G + A ++L G D N DP + + LH A N+ +V +LV GA ++ HES PL +++E S L LL GAD NA D R+TPL H +AS+ G G + LLL G+D +G+T ++
Sbjct: 69 ALFKVAERGLLYAAEILLRYGADLNFEDPVSYYN---PLHVAVLRNRPTMVRLLVSHGADIEKRDRIHESSPLDLASEESERLLCLLTLLDMGADVNAGDKHRKTPLLHALASSDGLTVHNTGNIQLLLQRGADISAATQDGETVESLL 214
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A2C9JDF7_BIOGL (Poly [ADP-ribose] polymerase n=3 Tax=Euthyneura TaxID=216307 RepID=A0A2C9JDF7_BIOGL) HSP 1 Score: 60.1 bits (144), Expect = 3.550e-6 Identity = 40/109 (36.70%), Postives = 57/109 (52.29%), Query Frame = 1
Query: 181 TALHWAT---FTNKADVVGVLVKAGACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVV 498
TALH A + + VV L++ GA L + + +PLH++A+++ + LL+H A NA D QT LHRVA QG + LL+ DP I G TAA +
Sbjct: 363 TALHCAAASPYPKRKQVVEALLRKGANLNDKNKDYLAPLHIAADKAHYDVMDVLLKHNAKVNALDGLGQTALHRVAQ-QGNMQACRLLMSYAIDPSIVSLQGYTAAQLA 470
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A8J4ZZI8_9CHEL (Palmitoyltransferase n=3 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZZI8_9CHEL) HSP 1 Score: 59.7 bits (143), Expect = 3.600e-6 Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 1
Query: 85 AAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVG-EGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQT 483
A + G + R ++D G D N DP T LHWA+ N+ +VV + GA + A+G E +PLH + + L LL++G D + D + +H +A+ G +V + G + + D NG T
Sbjct: 59 ATQYGIYERCRELIDNGYDVNCRDPENV----TLLHWASINNRKEVVRYYISKGAIIDAIGGELQSTPLHWATRQGHLGVVVILLQYGGDPSIRDGEGCSCIH-LAAQFGHTALVAYFVAKGQNVNLLDRNGMT 187
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: A0A7Y3I6N1_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3I6N1_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 3.900e-6 Identity = 56/184 (30.43%), Postives = 82/184 (44.57%), Query Frame = 1
Query: 85 AAESGEIDAFRVMLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGE-GHESPLHVSAERSALEAARALLRHGADSNAT---------------------------------DAFR-QTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANGQTAADVVGADVEEDDRSK 531
AAE G+++A R +L G D N S +ALHWA AD++ VLV AGA L+ G +PLH+++ R A +AL+ GA + A D +R +TPL AS G + V +LL +G+DPG A Q A+ + +DR++
Sbjct: 49 AAERGDLEAVRALLRDGADVNASQ----GDGMSALHWAAMNGDADMIEVLVYAGATLEGTTRLGGYTPLHLASHRGLSAAVQALVAAGASTGAMATTXXXXXXXXXXXXXXXXXXXXXXXXGEADVRDGYRGRTPLMFAASA-GHLHAVEILLAAGADPG---ATTQVVDFSARAEADREDRAR 224
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Match: UPI001BE749F1 (ankyrin repeat domain-containing protein n=1 Tax=Rhodoferax sp. U11-2br TaxID=2838878 RepID=UPI001BE749F1) HSP 1 Score: 58.5 bits (140), Expect = 3.960e-6 Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 1
Query: 73 ALGVAAESGEIDAFRVMLDRGED----GNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGEGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLHRVASTQGAVGMVVLLLDSGSDPGIKDANG 477
AL + A GE+D+ R +L D G V P L A +V +L++ GA + AVG ++ L + + + L AA+ALL+ GA + ATD L V T+G M+ LLLD+G+DP + D NG
Sbjct: 105 ALLMGAREGEMDSARALLRARADVDGRGGVMTP---------LAAAALRGHTQMVQLLLRFGADVNAVGLNEQTALMNAVKLNRLGAAQALLKAGASTRATDRMGDNLLV-VCITEGYPEMLSLLLDNGADPDLADVNG 233 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11955.1525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11955.1525.1 >prot_E-fasciculatus_F_contig11955.1525.1 ID=prot_E-fasciculatus_F_contig11955.1525.1|Name=mRNA_E-fasciculatus_F_contig11955.1525.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=152bp MLDRGEDGNVSDPPTSAHRRTALHWATFTNKADVVGVLVKAGACLQAVGEback to top mRNA from alignment at E-fasciculatus_F_contig11955:1193..2230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11955.1525.1 ID=mRNA_E-fasciculatus_F_contig11955.1525.1|Name=mRNA_E-fasciculatus_F_contig11955.1525.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1038bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11955:1193..2230+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11955:1193..2230+ >mRNA_E-fasciculatus_F_contig11955.1525.1 ID=mRNA_E-fasciculatus_F_contig11955.1525.1|Name=mRNA_E-fasciculatus_F_contig11955.1525.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=912bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11955:1193..2230+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |