mRNA_E-fasciculatus_F_contig11940.1517.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11940.1517.1 vs. uniprot
Match: D8LN97_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN97_ECTSI) HSP 1 Score: 554 bits (1427), Expect = 1.410e-188 Identity = 415/545 (76.15%), Postives = 433/545 (79.45%), Query Frame = 1
Query: 1 MVACRHQGCAKRASSDVEGGRVRAAEFCSGHREHGMVDVYKKICCGHPDCCMEPPSCGMEGSKSCSRHGNPGMRIMANPEVTRCGHPGSTKWPSYGVEGSKMAGLCPHLTKDRTTHVAEGRGQSPQQQHAGTETLPFGWDCSKTAEFCSHAQEANTATNVGQLGRKRPACGVEGTPTTKLGASSSKAGTVDVAASKRRKRCNHAGCNTKPVFGEEGSNKTKFCGQHRKAGMVNLTTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKRGRVKLSTASLTVKQTNKKRLQSDKKECKKETEKARADEDDASFGRSGERLSE-VKRRAKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREGGGAEARRTEAGEKRK-----RALFLGVTFVEEHDAEFLGEQAKRVRRFKTVEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSVSRGPGS-AAKGRPVGRRHLLETDMSNTTASRGLLRSVK 1614
MVACRHQGCA+RASS VEGGRVRAAEFCSGH E+GMVD KK G P CCME PSCGMEGSK+CSRHGNPGM M N +V RCGHPG TKWPSYGVEG KMAGLCP LTKDR T+V EGRGQSP+Q ETLPFG KTAEFCSHAQ ANTA NVGQLGRKRPAC VEG PT KLGAS+SKAG DV ASKRRK CNH GCNTKP+FGEEG+++TKFC H K GMVNLTTK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKR R KL+TASL KQ NKKRL +K + K+TE AR DEDD GRSGER S +KRRAKE XXXXXXXXXXXXXXXX RALFLGVTFVEEHDAEFLGE+AKRVRRFKT+EKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSVSRGPGS AAKGRP RRHLLETDMSNTTASRGLLRSVK
Sbjct: 1 MVACRHQGCAERASSGVEGGRVRAAEFCSGHAENGMVDFCKKTG-GRPGCCMEHPSCGMEGSKNCSRHGNPGM--MVNLDVKRCGHPGCTKWPSYGVEGCKMAGLCPQLTKDRMTYVVEGRGQSPRQHADDNETLPFGVGGGKTAEFCSHAQAANTA-NVGQLGRKRPACVVEGAPTIKLGASNSKAGMADVVASKRRKLCNHPGCNTKPLFGEEGTDETKFCAHHSKPGMVNLTTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKRKRFKLTTASLAAKQANKKRLHYEKNKEGKKTENARVDEDDTLPGRSGERQSRAIKRRAKEEGKETEDKARVDEDDEFVRRSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALFLGVTFVEEHDAEFLGERAKRVRRFKTLEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSVSRGPGSSAAKGRPASRRHLLETDMSNTTASRGLLRSVK 541
BLAST of mRNA_E-fasciculatus_F_contig11940.1517.1 vs. uniprot
Match: A0A6H5K5F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F0_9PHAE) HSP 1 Score: 362 bits (930), Expect = 4.170e-113 Identity = 341/544 (62.68%), Postives = 356/544 (65.44%), Query Frame = 1
Query: 1 MVACRHQGCAKRASSDVEGGRVRAAEFCSGHREHGMVDVYKKICCGHPDCCMEPPSCGMEGSKSCSRHGNPGMRIMANPEVTRCGHPGSTKWPSYGVEGSKMAGLCPHLTKDRTTHVAEGRGQSPQQQHAGTETLPFGWDCSKTAEFCSHAQEANTATNVGQLGRKRPACGVEGTPTTKLGASSSKAGTVDVAASKRRKRCNHAGCNTKPVFGEEGSNKTKFCGQHRKAGMVNLTTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKRGRVKLSTASLTVKQTNKKRLQSDKKECKKETEKARADEDDASFGRSGERLSEV-KRRAK-----ESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREGGGAEARRTEAGEKRKRALFLGVTFVEEHDAEFLGEQAKRVRRFKTVEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSVSRGPGSAAKGRPVGRRHLLETDMSNTTASRGLLRSVK 1614
MVACRHQGCA+RAS VEGGRVRAAEFCSGH E+GMVD KK GHP CCME PSCGMEG CSRHGNPGM + N +V RCGHP KMAGLCP L+KD T+V EGRGQSP+Q ETLPF VA SKR+K CNH GC MVNLTTK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KR R KL+ ASL KQTNKKRL S+KK+ K TE A +EDD GRS ER S V KRRAK XXXXXXXXXXXXXXXXXXX RKRALFLGVTFVEEHDAEFLGE AKRVRRFKT+EKKLRNKVTEGNMNPLRDT+RVLATETQGYRVSCVSKVSVSRGPGS+AKGRPV RRHLLETDMSNTTASRGLLRS K
Sbjct: 1 MVACRHQGCAERASFGVEGGRVRAAEFCSGHAENGMVDFCKKTG-GHPGCCMEHPSCGMEGCTYCSRHGNPGM--LVNFDVKRCGHPVXXXXXXXXXXXXKMAGLCPQLSKDGMTYVVEGRGQSPRQHADDNETLPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA-SKRKKLCNHPGCXXXXXXXXXXXXXXXXXXXXXXXXMVNLTTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKRFKLTVASLAAKQTNKKRLHSEKKKEGKGTESATVNEDDTLLGRSSERHSRVMKRRAKGEGKKTEGKARVDDDDKLLGRSGGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRALFLGVTFVEEHDAEFLGELAKRVRRFKTLEKKLRNKVTEGNMNPLRDTIRVLATETQGYRVSCVSKVSVSRGPGSSAKGRPVSRRHLLETDMSNTTASRGLLRSGK 540
BLAST of mRNA_E-fasciculatus_F_contig11940.1517.1 vs. uniprot
Match: A0A6H5LE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE14_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 7.270e-15 Identity = 57/126 (45.24%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 1255 EARRTEAGEKRKRALFLGVTFVEEHDAEFLGEQAKRVRRFKTVEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSV------SRGPGSAAKGRPVGRRHLLETDMSNTTASRGLLRSVK 1614
EARR ++R LFLG+T V E+D+ G K ++RF VE+ +R+ V E NMNPLRDT RVLA E G+ V C+SKVS + A G P G L TD++NT ASRG LR ++
Sbjct: 1088 EARR----KRRLNVLFLGMTRVAEYDSR--GGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIE 1207
BLAST of mRNA_E-fasciculatus_F_contig11940.1517.1 vs. uniprot
Match: D7G392_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G392_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 7.460e-15 Identity = 57/126 (45.24%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 1255 EARRTEAGEKRKRALFLGVTFVEEHDAEFLGEQAKRVRRFKTVEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSV------SRGPGSAAKGRPVGRRHLLETDMSNTTASRGLLRSVK 1614
EARR ++R LFLG+T V E+D+ G K ++RF VE+ +R+ V E NMNPLRDT RVLA E G+ V C+SKVS + A G P G L TD++NT ASRG LR ++
Sbjct: 1089 EARR----KRRLNVLFLGMTRVAEYDSR--GGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIE 1208 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11940.1517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11940.1517.1 >prot_E-fasciculatus_F_contig11940.1517.1 ID=prot_E-fasciculatus_F_contig11940.1517.1|Name=mRNA_E-fasciculatus_F_contig11940.1517.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=538bp MVACRHQGCAKRASSDVEGGRVRAAEFCSGHREHGMVDVYKKICCGHPDCback to top mRNA from alignment at E-fasciculatus_F_contig11940:222..3822- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11940.1517.1 ID=mRNA_E-fasciculatus_F_contig11940.1517.1|Name=mRNA_E-fasciculatus_F_contig11940.1517.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3601bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11940:222..3822- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11940:222..3822- >mRNA_E-fasciculatus_F_contig11940.1517.1 ID=mRNA_E-fasciculatus_F_contig11940.1517.1|Name=mRNA_E-fasciculatus_F_contig11940.1517.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3228bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11940:222..3822- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |