prot_E-fasciculatus_F_contig11932.1510.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11932.1510.1
Unique Nameprot_E-fasciculatus_F_contig11932.1510.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length269
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11932.1510.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 1.540e-141
Identity = 239/270 (88.52%), Postives = 247/270 (91.48%), Query Frame = 0 
Query:    1 MRVSRARRHRQRSALLRACMVVISLLADVELTLADEAAGLEPSMLSPLAQLTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTALIAAFGAEPTPSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIAESAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGXXXXXXXXXXXQGSSGSFLPTLGRFPAGGAAEKTEGKDRGGGQGEEDDARHDAA-TALLLSPSWLG 269
            M  S ARR RQ SALL+AC+V  SLLA VE T+ADEAAGLEPSMLSPLAQLTLIDAQVERDD++YFQVLTEAWQSTRVRVSIEDCTPRTA+IAAFGAEPTPSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIA+SAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPG         X QGS GSFLPTLGRFPAGGAAEKTEGKDRGGG GEE+DARH AA TALLLSPSWLG
Sbjct:    1 MVASGARRCRQGSALLKACLVS-SLLA-VEPTVADEAAGLEPSMLSPLAQLTLIDAQVERDDIHYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIADSAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGSSVSRRGGGXGQGSRGSFLPTLGRFPAGGAAEKTEGKDRGGGDGEEEDARHAAAATALLLSPSWLG 268
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BLAST of mRNA_E-fasciculatus_F_contig11932.1510.1 vs. uniprot
Match: D8LS69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS69_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 4.190e-135
Identity = 206/228 (90.35%), Postives = 210/228 (92.11%), Query Frame = 0 
Query:    4 SRARRHRQRSALLRACMVVISLLADVELTLADEAAGLEPSMLSPLAQLTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTALIAAFGAEPTPSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIAESAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGXXXXXXXXXXXQGSSGSFLPTLGRFPA 231
            SRARR R RSALLRAC+V  SLLA VELTLADEAAGLEPSMLSPLAQLTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTA+IAAFGAEPTPSRHELLAHAMPD+AGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGP DTLAFQAAVIA+SAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPG           QGS GSFLPTLGRFPA
Sbjct:    4 SRARRCRLRSALLRACLVS-SLLA-VELTLADEAAGLEPSMLSPLAQLTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDVAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPADTLAFQAAVIADSAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGSSASRRVGGGGQGSRGSFLPTLGRFPA 229
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11932.1510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJD0_9PHAE1.540e-14188.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS69_ECTSI4.190e-13590.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..269
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..34
score: 0.724

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11932contigE-fasciculatus_F_contig11932:186..3188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11932.1510.1mRNA_E-fasciculatus_F_contig11932.1510.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11932 102..3188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11932.1510.1 ID=prot_E-fasciculatus_F_contig11932.1510.1|Name=mRNA_E-fasciculatus_F_contig11932.1510.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=269bp
MRVSRARRHRQRSALLRACMVVISLLADVELTLADEAAGLEPSMLSPLAQ
LTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTALIAAFGAEPT
PSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDR
YFAGPPDTLAFQAAVIAESAVYPTLDRGVAASGDCLRKVAVPPVVVPTIT
GPPGSSAPRRGGGGGQGSSGSFLPTLGRFPAGGAAEKTEGKDRGGGQGEE
DDARHDAATALLLSPSWLG
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