mRNA_E-fasciculatus_F_contig11877.1469.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: A0A6H5KYY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY1_9PHAE) HSP 1 Score: 475 bits (1222), Expect = 2.330e-160 Identity = 264/340 (77.65%), Postives = 271/340 (79.71%), Query Frame = 1
Query: 64 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSSXXXXXXXXXXXXXXXXXXKTKKAGRGAGLRKKQAATAGGLTSQLQHLNTPTKKR-AESTPKADRGAAVTGAPSIQQQTPPLPVRSSPSKTTPVVARNGA------------GASALVADLLDADDGVGAASRADGAA-VATPVPVDDDSAXXXXXXXXXXXXXXXRCRPSRRRSFGEIIRSAVTGDSEVRLRDHLFDFSTASPAPPLP 1041
MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTV+FERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSS K KKAGRG GLRKKQAAT GG+TSQLQHLNTPTKKR AESTPK AA GAPSIQ QTPPLP R SPSKTTPV ARNG GASALVA+LLDAD G GAA RADGAA +ATPVP +DD A R PSRRRSFGEIIRS VTG+SEVRLRDHLFDFSTASPAPP+P
Sbjct: 1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVLFERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSSGSGSGAAK----------KNKKAGRGEGLRKKQAATGGGITSQLQHLNTPTKKRSAESTPKR---AASAGAPSIQHQTPPLPERGSPSKTTPVAARNGVANAGSDSKHGGGGASALVAELLDADVGTGAALRADGAAAIATPVPFEDDIATSPESGGSGRRGSGGR--PSRRRSFGEIIRSVVTGNSEVRLRDHLFDFSTASPAPPVP 325
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: D8LDS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS5_ECTSI) HSP 1 Score: 466 bits (1199), Expect = 6.890e-157 Identity = 299/393 (76.08%), Postives = 305/393 (77.61%), Query Frame = 1
Query: 64 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSSXXXXXXXXXXXXXXXXXXKTKKAGRGAGLRKKQAATAGGLTSQLQHLNTPTKKRA-ESTPKADRGAAVTGAPSIQQQTPPLPVRSSPSKTTPVVARNGA------------GASALVADLLDADDGVGAASRADGAA-VATPVPVDDDSAXXXXXXXXXXXXXXXRCRPSRRRSFGEIIRSAVTGDSEVRLRDHLFDFSTASPAPPLPGXXXXXXXXXXXTATKPATRAARKGPVVPNKASSPASSTALPAVVNGNGKRRG 1200
MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLR FEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHH+LNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPS XXXXXXXXXXXXXXXX G GLRKKQAAT GG+TSQLQHLNTPTKKRA ESTPK AA GAPS QQQTPPLP R SPSKTTPV ARNG GASALVA+LLDAD G GAASRADGAA +ATPVP DD A XX R PSRRRSFGEIIRSAVTG+SEVRLRDHLFDFSTASPAPP+P XXXXXXXXXX LPAVVNGNGKRRG
Sbjct: 1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRVFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHILNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSXXXXXXXXXXXXXXXXX---------GEGLRKKQAATGGGITSQLQHLNTPTKKRAAESTPKR---AASAGAPSTQQQTPPLPARGSPSKTTPVAARNGVANAGSDSKHGGGGASALVAELLDADGGTGAASRADGAAAIATPVPFGDDIATSPESGGSERRGXXGR--PSRRRSFGEIIRSAVTGNSEVRLRDHLFDFSTASPAPPVPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------LPAVVNGNGKRRG 371
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: A0A7S1U3F0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3F0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.070e-15 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 1
Query: 61 AMPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHVLN 366
AM NW+A+E + G W++FK+LK G D+++L+ W ++G++ E FE+++SW+PFYW K L + L P + V+F+ +V+ M H +L+
Sbjct: 32 AMVNWIATEAVTLLCLLAGFWRSFKLLKDGIVDFSILEFWAVMGVVELAEWSFEWIISWVPFYWTFKALAMLTLCYPRSRVAGVLFDALVIPFMRFCHELLS 133
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: A0A8K1FI23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI23_PYTOL) HSP 1 Score: 66.6 bits (161), Expect = 2.300e-9 Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 1
Query: 73 WLASELCMVASFSLGAWKTFKVLKHG------GTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHVLNNLVVPNVVEFAV 402
+L SE GA+++ K L T +L+ W LG L FEEY EF VSWIPFY+ KC+ LGLL +P I V++ + MD ++ V+P V V
Sbjct: 4 YLISEGLTCLGMFNGAYESLKALSRAEKGIEVSTLTQILEFWIALGALTIFEEYAEFFVSWIPFYYFFKCMLLGLLLVPSTKISHVLYHGFIEPTMDKIQEQVHARVLPVVESLVV 119
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: G4YIB0_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YIB0_PHYSP) HSP 1 Score: 63.2 bits (152), Expect = 2.910e-8 Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 73 WLASELCMVASFSLGAWKTFKVLKH--GGTDY----NLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 321
+L SE GA+++ KVL G D ++L+ W +L F++Y EF +SW PFY+L KC+ LGLL P + P ++FE
Sbjct: 4 YLLSEGLTCVGICSGAYESLKVLSRVEKGVDTATLASVLEFWIVLAAAAIFQQYLEFFISWFPFYYLFKCILLGLLLTPSKHFPHLLFE 92
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: A0A225WDV8_9STRA (Receptor expression-enhancing protein 5-like isoform X2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDV8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.480e-8 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 76 LASELCMVASFSLGAWKTFKVLKH--GGTDYNLL----KTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 321
L+ L V FS GA+++ KVL G D ++L + W +L FE+Y EF +SW PFY+L KC+ LGLL P P ++FE
Sbjct: 6 LSEGLTCVGIFS-GAYESLKVLSRVEKGVDTDILAAVLELWIVLAATAIFEQYIEFFISWFPFYYLFKCVLLGLLLTPTTQFPHLLFE 92
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: W2MGF6_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2MGF6_PHYPR) HSP 1 Score: 59.3 bits (142), Expect = 6.560e-7 Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 76 LASELCMVASFSLGAWKTFKVLKH--GGTDYN----LLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 321
L+ L V FS GA+++ KVL G D + +L+ W +L F++Y EF +SW PFY+L KC+ LGLL P + FE
Sbjct: 6 LSEGLTCVGIFS-GAYESLKVLSRVEKGVDTDTLAAVLEFWIVLAAAAIFQQYIEFFISWFPFYYLFKCVVLGLLLTPNKQFTHLFFE 92
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: A0A5D6Y973_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y973_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 2.990e-6 Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 1
Query: 115 GAWKTFKVLKHG------GTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVV 330
GA+++ KVL T +L+ W +L +E+Y EF VSWIPFY+L KC LGLL +P V+++ V
Sbjct: 23 GAYESLKVLSRADKGVETSTLCGILEFWVVLAATAVYEQYVEFFVSWIPFYFLFKCGFLGLLLVPHTKFVHVLYDGFV 100
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: A0A833W9E4_PHYIN (TB2/DP1 HVA22 family protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W9E4_PHYIN) HSP 1 Score: 56.6 bits (135), Expect = 6.700e-6 Identity = 31/89 (34.83%), Postives = 46/89 (51.69%), Query Frame = 1
Query: 73 WLASELCMVASFSLGAWKTFKVLKH--GGTDYN----LLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 321
+L SE GA+++ KVL G D + +L+ W +L F++Y E +SW PFY+L KC+ LGLL P + + FE
Sbjct: 4 YLLSEGLTCVGIISGAYESLKVLSRVDKGVDTDTLAAVLELWIVLAAAAIFQQYIELFISWFPFYYLFKCVLLGLLLTPNKHFTHLFFE 92
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Match: A0A8J5M210_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M210_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.720e-5 Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 1
Query: 163 NLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHVLNNLVVPNVVEFAV 402
N LK +L F++Y EF +SW PFY+L KC+ LGLL P ++FE + + + H L+ V+P + +
Sbjct: 62 NFLKHRIVLAAAAIFQQYIEFFISWFPFYYLFKCVLLGLLLTPNKQFTHLLFEGFIRPAVVSIKHKLDTNVLPIIESLVI 141 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11877.1469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11877.1469.1 >prot_E-fasciculatus_F_contig11877.1469.1 ID=prot_E-fasciculatus_F_contig11877.1469.1|Name=mRNA_E-fasciculatus_F_contig11877.1469.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=400bp MSRTNTPSPAAPSSPLDGLSAMPNWLASELCMVASFSLGAWKTFKVLKHGback to top mRNA from alignment at E-fasciculatus_F_contig11877:1979..4240+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11877.1469.1 ID=mRNA_E-fasciculatus_F_contig11877.1469.1|Name=mRNA_E-fasciculatus_F_contig11877.1469.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2262bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11877:1979..4240+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11877:1979..4240+ >mRNA_E-fasciculatus_F_contig11877.1469.1 ID=mRNA_E-fasciculatus_F_contig11877.1469.1|Name=mRNA_E-fasciculatus_F_contig11877.1469.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2400bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11877:1979..4240+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |