mRNA_E-fasciculatus_F_contig11864.1460.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11864.1460.1
Unique NamemRNA_E-fasciculatus_F_contig11864.1460.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: D7FYK4_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYK4_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 6.740e-109
Identity = 174/189 (92.06%), Postives = 174/189 (92.06%), Query Frame = 1 
Query:    1 MVTSSSTHQHQGAEMPASTAPTQQSCNRQGSRGIVRLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKEKAKSFACRVTIVEGAADGGVAGQGTGGGVG--TARERYGTGYFTLDEDF 561
            MVTS  THQHQGAEMP STAPTQQS NRQGSRGIVRLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQL ALEEAKRKEKAKSFACRVTIVEGAADG  AGQG        TARERYGTGYFTLDEDF
Sbjct:    1 MVTS--THQHQGAEMPPSTAPTQQSYNRQGSRGIVRLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLEALEEAKRKEKAKSFACRVTIVEGAADG-TAGQGXXXXXXXXTARERYGTGYFTLDEDF 186
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: A0A836CP50_9STRA (BTB/POZ protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP50_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.070e-43
Identity = 93/166 (56.02%), Postives = 110/166 (66.27%), Query Frame = 1 
Query:  106 RLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMET-DEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKE--KAKSFACRVTIVEG----------AADGGVAGQGTGGGVGTA-RERYGTGYFTLDEDF 561
            +LNVGG++F TS  TI   GN MLA+MF      +T D +GF FIDRDG+RF HVLNFLRC SLPSFDEAWRYE IMEEADF+A+EEL++LC  ++    +AK KE  +AKS +CRVTIVE           AA  G    G   G G   RE +GT  FTLDEDF
Sbjct:    9 QLNVGGRRFCTSIETIQGHGNSMLAAMFSNPLYKKTEDAQGFVFIDRDGDRFPHVLNFLRCGSLPSFDEAWRYEAIMEEADFFAVEELKQLCAARVEESAQAKEKEEERAKSMSCRVTIVEAPKPLAAPLAVAALTGELDPGPQWGTGVPPREAFGTFEFTLDEDF 174
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: A0A7S2H0D8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0D8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.830e-29
Identity = 56/123 (45.53%), Postives = 89/123 (72.36%), Query Frame = 1 
Query:  103 VRLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKEKAKSF-----ACRVTIV 456
            +RLNVGG K+ TSR T+MQ  + MLA MF G + +  DE G+AFIDRDG RFRH+LN+LR  ++P+F++ WR++E++EEADF+ + +LR+L E +++ ++  + +E+A+        C+V I+
Sbjct:   30 IRLNVGGVKYHTSRGTLMQCPSSMLARMFSGTWTVHEDE-GYAFIDRDGTRFRHILNYLRNRTVPAFEDEWRFQEVLEEADFFGLPDLRDLVEAKISQMKAQRAEERAEDAKSSGQVCQVMIL 151
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: UPI0010FCC4E8 (BTB/POZ domain-containing protein KCTD7-like n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FCC4E8)

HSP 1 Score: 92.8 bits (229), Expect = 2.240e-19
Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = 1 
Query:   97 GIVRLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSS-LPSFDEAWRYEEIMEEADFYAIEELRELCER 384
            G++ LNVGG KF+T+ ST+ +  N MLA+MF G+ ++ TD EG  FIDRDG  F H+LNFLR SS LPS   A    E+ +EA FY IE L E+ ER
Sbjct:   37 GVISLNVGGYKFVTTLSTLTKHSNSMLAAMFSGRHHLNTDSEGRYFIDRDGSYFEHILNFLRDSSHLPSAKIAL---EVYKEAKFYQIEGLVEILER 130
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: M2Y739_GALSU (Potassium channel tetramerisation domain-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y739_GALSU)

HSP 1 Score: 88.6 bits (218), Expect = 7.250e-19
Identity = 38/89 (42.70%), Postives = 64/89 (71.91%), Query Frame = 1 
Query:  100 IVRLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEEL 366
            +V+LNVGGK F T+  T+ +  + ML++ F GK+++  DE G+ F+DRDG+RFRH+LN+LRC ++   ++     EI+EEA+++ ++ L
Sbjct:    8 VVKLNVGGKYFETTVDTLTKYSDSMLSAWFSGKYSVLKDENGYVFLDRDGDRFRHILNYLRCGTVHIGEDIRLLGEILEEAEYFGLQSL 96
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: A0A835LNN4_9MAGN (BTB domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LNN4_9MAGN)

HSP 1 Score: 89.7 bits (221), Expect = 4.280e-18
Identity = 42/88 (47.73%), Postives = 66/88 (75.00%), Query Frame = 1 
Query:  100 IVRLNVGGKKFLTSRSTIMQAG-NCMLASMFRGKFNMETD-EEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAI 357
            +VRLN+GGKKF T+R T+ Q   + MLA+MF G++NM  D ++G  F+DRDG+ FRHVLN+LR   +P+ +++  Y+E++ EA++Y +
Sbjct:   11 LVRLNIGGKKFCTTRDTLTQREPDSMLAAMFSGRYNMHQDSDKGIVFVDRDGKHFRHVLNWLRDGVVPTLEDS-EYQELLREAEYYQL 97
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: A0A5N5GMK0_9ROSA (FH protein interacting protein FIP2-like n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5GMK0_9ROSA)

HSP 1 Score: 86.7 bits (213), Expect = 1.870e-17
Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 1 
Query:   91 SRGIVRLNVGGKKFLTSRSTIMQAG-NCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAI 357
            S  +V LNVGGKKF T+  T+ Q   + MLA+MF G+  +  D++G+ FIDRDGE FRH+LN+LR   +P   EA +Y E+++EA +Y +
Sbjct:    7 SSSLVHLNVGGKKFSTTVDTLTQRQPDSMLAAMFSGRHTLRQDKKGYVFIDRDGEHFRHILNWLRDGEIPKL-EASQYAELVKEAKYYQL 95
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: UPI0010A9FBA1 (FH protein interacting protein FIP2-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010A9FBA1)

HSP 1 Score: 86.3 bits (212), Expect = 2.290e-17
Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 1 
Query:   91 SRGIVRLNVGGKKFLTSRSTIMQAG-NCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAI 357
            S  +V LNVGGKKF T+  T+ Q   + MLA+MF G+  +  D++G+ FIDRDGE FRH+LN+LR   +P   EA +Y E+++EA +Y +
Sbjct:    7 SSSLVHLNVGGKKFSTTVGTLTQRQPDSMLAAMFSGRHTLRQDKKGYVFIDRDGEHFRHILNWLRDGEVPKL-EASQYAELVKEAKYYQL 95
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: A0A8J1TZ96_OWEFU (Ofus.G08467 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TZ96_OWEFU)

HSP 1 Score: 86.3 bits (212), Expect = 3.000e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 1 
Query:  100 IVRLNVGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKE 420
            ++ LNVGG  + T+R T+    N M+ +MF G  +   DE G  FIDRDGE F++VLNFLR S+L   D    Y  ++ EADFY I+ L +L    +  ++E K+KE
Sbjct:   24 LIHLNVGGVIYTTTRLTLTTYPNTMIGAMFNGNMSNTKDEHGRIFIDRDGELFKYVLNFLRSSTLSLPDGFKDYSSLLAEADFYQIQPLTDLVRNIIQEIDEEKKKE 130
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Match: W8SZD1_9ROSA (Putative FH protein n=1 Tax=Pyrus x bretschneideri TaxID=225117 RepID=W8SZD1_9ROSA)

HSP 1 Score: 85.9 bits (211), Expect = 3.390e-17
Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 1 
Query:  100 IVRLNVGGKKFLTSRSTIMQAG-NCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAI 357
            +V LNVGGKKF T+  T+ Q   + MLA+MF G+  +  D++G+ FIDRDGE FRH+LN+LR   +P   EA +Y E+++EA +Y +
Sbjct:   10 LVHLNVGGKKFSTTVDTLTQRQPDSMLAAMFSGRHTLRQDKKGYVFIDRDGEHFRHILNWLRDGEIPKL-EASQYAELVKEAKYYQL 95
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11864.1460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYK4_ECTSI6.740e-10992.06BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CP50_9STRA1.070e-4356.02BTB/POZ protein n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S2H0D8_9STRA7.830e-2945.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI0010FCC4E82.240e-1953.61BTB/POZ domain-containing protein KCTD7-like n=2 T... [more]
M2Y739_GALSU7.250e-1942.70Potassium channel tetramerisation domain-like prot... [more]
A0A835LNN4_9MAGN4.280e-1847.73BTB domain-containing protein n=1 Tax=Coptis chine... [more]
A0A5N5GMK0_9ROSA1.870e-1747.78FH protein interacting protein FIP2-like n=1 Tax=P... [more]
UPI0010A9FBA12.290e-1747.78FH protein interacting protein FIP2-like n=1 Tax=M... [more]
A0A8J1TZ96_OWEFU3.000e-1742.99Ofus.G08467 protein n=1 Tax=Owenia fusiformis TaxI... [more]
W8SZD1_9ROSA3.390e-1748.28Putative FH protein n=1 Tax=Pyrus x bretschneideri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11864contigE-fasciculatus_F_contig11864:23..2931 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.9
Seed ortholog evalue1.3e-86
Seed eggNOG ortholog2880.D7FYK4
KEGG koko:K21919,ko:K21922
EggNOG free text desc.protein homooligomerization
EggNOG OGsKOG2716@1,KOG2716@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBTB/POZ-like
Ec32 orthologEc-02_004350.1
Exons4
Model size564
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11864.1460.1prot_E-fasciculatus_F_contig11864.1460.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11864 23..2931 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927697.4945946-CDS-E-fasciculatus_F_contig11864:22..2141622927697.4945946-CDS-E-fasciculatus_F_contig11864:22..214Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 23..214 -
1695995654.2801237-CDS-E-fasciculatus_F_contig11864:22..2141695995654.2801237-CDS-E-fasciculatus_F_contig11864:22..214Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 23..214 -
1622927697.508112-CDS-E-fasciculatus_F_contig11864:1124..12491622927697.508112-CDS-E-fasciculatus_F_contig11864:1124..1249Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 1125..1249 -
1695995654.290266-CDS-E-fasciculatus_F_contig11864:1124..12491695995654.290266-CDS-E-fasciculatus_F_contig11864:1124..1249Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 1125..1249 -
1622927697.546182-CDS-E-fasciculatus_F_contig11864:1620..17481622927697.546182-CDS-E-fasciculatus_F_contig11864:1620..1748Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 1621..1748 -
1695995654.3474412-CDS-E-fasciculatus_F_contig11864:1620..17481695995654.3474412-CDS-E-fasciculatus_F_contig11864:1620..1748Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 1621..1748 -
1622927697.559435-CDS-E-fasciculatus_F_contig11864:2812..29311622927697.559435-CDS-E-fasciculatus_F_contig11864:2812..2931Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 2813..2931 -
1695995654.3678-CDS-E-fasciculatus_F_contig11864:2812..29311695995654.3678-CDS-E-fasciculatus_F_contig11864:2812..2931Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11864 2813..2931 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11864.1460.1

>prot_E-fasciculatus_F_contig11864.1460.1 ID=prot_E-fasciculatus_F_contig11864.1460.1|Name=mRNA_E-fasciculatus_F_contig11864.1460.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=188bp
MVTSSSTHQHQGAEMPASTAPTQQSCNRQGSRGIVRLNVGGKKFLTSRST
IMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPS
FDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKEKAKSFACRVT
IVEGAADGGVAGQGTGGGVGTARERYGTGYFTLDEDF*
back to top

mRNA from alignment at E-fasciculatus_F_contig11864:23..2931-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11864.1460.1 ID=mRNA_E-fasciculatus_F_contig11864.1460.1|Name=mRNA_E-fasciculatus_F_contig11864.1460.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2909bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11864:23..2931- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTCACCAGCAGCAGCACTCACCAGCACCAGGGGGCCGAGATGCCAGC
GTCTACGGCGCCAACGCAGCAGTCCTGCAACCGTCAGGGCTCACGAGGGA
TCGTCCGCCTAAACGTGGGGTAAGCGGCGTGCCTTGTATTGTTTTTTTTT
CGCCCATCCCTTCCATATGAAAAAGGCACATGTAGCGCAGCGAGCACGCC
GTTGGTGCATTTATGCTCGAGAGAAGAAGAGAAACGCACGGTCTCTCTCT
CTCTCCCGTTGCAAGTCAGGCAGCGGTAGCCAGCAACGGGGAGGTTGTTG
ACACCGCTGCCGTGTGTTTGGGGTAACATCTGCTCTGGTCGTAGCAGCGG
GGGAGGCATCACGAACAACAATATGGCAGGCAGCCACACACAAAACACTT
TACAATAAAACATGGCGGGAAATAAGGTTATCGGCGTCATGACCGCGAGC
GGGGCTGTATGTACAGATGTAGATAGCCCCCTAGACATCTCACGCGCCCG
CTGTTGTTACTTGAAAAGACGAGGCGTAAAGGCAGTCGTCGCTCGTGTTT
ACTGGTTAGCAGTTGCTGGAAACTCATCGTCAAGGCGTACGTTCAATGCT
CCCACGTCGTGCAAGTTGTAGTACAATGGCCCGATTCCTCCGCAGCTGTT
CGCTTAAGTCCTTGAGTTTGGTTCTCGCCTGCTCGGAGATGTAAAGTGTC
CAGGTAACAAACGTATATGGCATATAATTGGCATTGAAGACCACATCGAG
AGAGGGTAGAGCGGATGGTGTAGGAGATTGCGTGTGGACAGCAGTCGGTT
CTCTGTTCTCCGTTTTGTTGGCAACTTGCGTGATCACCCCATCACGTGAT
CACCCCATCACACCCGTACATGCACATGTGAGTATATGAGATTCGGTGAC
TCCGTTGCTATTTAGACCAACAGGTCAAGTAGGCATGCAACAACATGCGA
TGGATTGAACGCGCTGCTCGTTGAGAGCAATCGTTGACGTATGGGCACTG
GAGCCACATCCACCCCTCAAAGCGCCGTTAGTTGTCTTTTCCGGCTGCCC
GTTCTAAGTAATGCTTTACCGACTTCCTTGCGTACGATACTCACCCTTCC
GCACATGGAACAGCTGTGGAAATGAAACGCGTCATCAGCGATTGCTTCAC
GCCCCTCTCTCGCTCTCTCTCGCCGTGCATCAGGGGCAAGAAGTTTCTGA
CGTCGCGGTCGACCATCATGCAGGCCGGCAACTGCATGCTGGCCTCCATG
TTCAGAGGAAAGTTCAACATGGAGACAGACGAGGAAGGGTTCGCCTTCAT
CGACCGCGACGGTGGGTACGGACGGTGGCGTACTGCTGCTGAAGCGTGGT
GTATCGTAGCTCCCTGATGGTTGATAGCCTGCCGATGCGGATACACCTTC
TTAGTCCAGACGGTTGTGTTGGTTATCCCGAGGGTGTAAACGTAAGACGA
CAGCAGCAGAGAGAGGCAACCAGCAACGACAACATTCTTGTTGAAGACGC
CCGCCAACCGGATTGCAAGCACAACTCCCGTGTCAAAGTCGTTCCGAGAG
TGCCTTGCACCTCCCCCCCTCTCTCACTGACCTTTCTCTCTATTTCTCCC
CTTCCCCACTCTCTCCCCCTCTCTTCCCTCCCTCCCTCCCTTCTCTCCCT
TCTCTCCCCTCTCTCTCCTCCCTCATCTCCAGGAGAGAGGTTTCGGCACG
TGCTCAACTTCCTCCGTTGCTCGAGCCTCCCTTCCTTCGACGAAGCCTGG
CGGTACGAGGAAATCATGGAGGAGGCAGACTTCTACGCGATCGAGGAACT
CAGGGAGGTGAGAAAACAAGACCGTCAAGACCATCGGCAAAGCACCTTGG
TTCATTGGTCGCTGCTTTGTGGTGCTTCCTTGACGGGTTTGTGATCGCAA
CCCGATATTTCGTTGACAGGGGTTGAATTTCCACAGCAAGTGAGGGGAAT
GAGTAGAGGCTAGGGCTGTTGTTGTTGCGAAGAGAACAACACCCACGACG
ACACAGTCCGATTGGATTTGCAGTTGTGCCAGGGTAGAAGTAATGTGTAT
CTGTTGCGGATGTCAAGTATAGCAGGGCGAGAGGATTCACACCATCACGA
GTCTTGCGGGAAGCCACTACGATAGTTTAACGTTTTGAGTTCAACACGTT
TTGAAACGGGTGATCGATCGATCGCCTCCGTCACGCAACGGGGTTGATCA
AACGATTTTCTGGCATCTATGCATAGCTGAGGCGTTGAGTACCGCAACAG
AGTACCACGAGCAACACCTAAGCCAAGAGGATCATTTCATTTCATGTCAA
GGCTGTCTGCGGGAGTGTCTTGAGGCTTTTGTGTCCCTCCCTCTCTCTTC
TTGTACTGCAGGAAGTTTTGTTGAACGTCGCAATAAGAGTCGGTCAGTGC
CTGGTCATATGCCTTGGCTAGTTGATAGCCCAACATTCCCCCTCTTGTGT
TGATGCCTGAGGTAAATTGAAGGCATTGATACCCACGTCTACGTACTGCT
GTAGAACCGAACAACGGCTGCCAATCCAATGCGCCCGTCTGCTGAGTTAC
GCGAAAACATGCATGAAGAGATCTTCAACAACTCTTACGCGGTTGAAACC
CGGAACGACTTGGTTCATCCTGCTGTGCACTTCCAATCCCCGCACCCCCG
CAAGCCTTCTATTTACACCACCACCACCACCGCTTCCTAATGCTGCTATT
GTTTTTATGTTTTGCAGCTTTGTGAGAGACAACTCGCGGCCCTCGAAGAA
GCGAAGCGAAAGGAAAAGGCCAAGTCGTTCGCGTGCAGGGTCACGATAGT
GGAGGGAGCGGCGGACGGAGGCGTCGCCGGCCAGGGGACGGGGGGCGGCG
TTGGAACGGCGAGGGAGCGCTACGGAACCGGATACTTTACCCTCGACGAG
GACTTCTGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11864:23..2931-

>mRNA_E-fasciculatus_F_contig11864.1460.1 ID=mRNA_E-fasciculatus_F_contig11864.1460.1|Name=mRNA_E-fasciculatus_F_contig11864.1460.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1128bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11864:23..2931- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTCACCAGCAGCAGCACTCACCAGCACCAGGGGGCCGAGATGCCAGC
GTCTACGGCGCCAACGCAGCAGTCCTGCAACCGTCAGGGCTCACGAGGGA
TCGTCCGCCTAAACGTGGGATGGTCACCAGCAGCAGCACTCACCAGCACC
AGGGGGCCGAGATGCCAGCGTCTACGGCGCCAACGCAGCAGTCCTGCAAC
CGTCAGGGCTCACGAGGGATCGTCCGCCTAAACGTGGGGGGCAAGAAGTT
TCTGACGTCGCGGTCGACCATCATGCAGGCCGGCAACTGCATGCTGGCCT
CCATGTTCAGAGGAAAGTTCAACATGGAGACAGACGAGGAAGGGTTCGCC
TTCATCGACCGCGACGGGGCAAGAAGTTTCTGACGTCGCGGTCGACCATC
ATGCAGGCCGGCAACTGCATGCTGGCCTCCATGTTCAGAGGAAAGTTCAA
CATGGAGACAGACGAGGAAGGGTTCGCCTTCATCGACCGCGACGGAGAGA
GGTTTCGGCACGTGCTCAACTTCCTCCGTTGCTCGAGCCTCCCTTCCTTC
GACGAAGCCTGGCGGTACGAGGAAATCATGGAGGAGGCAGACTTCTACGC
GATCGAGGAACTCAGGGAGGAGAGAGGTTTCGGCACGTGCTCAACTTCCT
CCGTTGCTCGAGCCTCCCTTCCTTCGACGAAGCCTGGCGGTACGAGGAAA
TCATGGAGGAGGCAGACTTCTACGCGATCGAGGAACTCAGGGAGCTTTGT
GAGAGACAACTCGCGGCCCTCGAAGAAGCGAAGCGAAAGGAAAAGGCCAA
GTCGTTCGCGTGCAGGGTCACGATAGTGGAGGGAGCGGCGGACGGAGGCG
TCGCCGGCCAGGGGACGGGGGGCGGCGTTGGAACGGCGAGGGAGCGCTAC
GGAACCGGATACTTTACCCTCGACGAGGACTTCTGACTTTGTGAGAGACA
ACTCGCGGCCCTCGAAGAAGCGAAGCGAAAGGAAAAGGCCAAGTCGTTCG
CGTGCAGGGTCACGATAGTGGAGGGAGCGGCGGACGGAGGCGTCGCCGGC
CAGGGGACGGGGGGCGGCGTTGGAACGGCGAGGGAGCGCTACGGAACCGG
ATACTTTACCCTCGACGAGGACTTCTGA
back to top