mRNA_E-fasciculatus_F_contig1174.1377.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1174.1377.1
Unique NamemRNA_E-fasciculatus_F_contig1174.1377.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: A0A6H5KGT8_9PHAE (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 6.140e-152
Identity = 229/252 (90.87%), Postives = 242/252 (96.03%), Query Frame = 1
Query:   37 MTFGLYCLVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEKDLTGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVLRNSAAKAQKTR 792
            MTFG+YCLVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTP N+F NNLLVFFVTFSIASCYISRVIRLAVGF PKLRRS P+LMSEKLLIAVSLSIGV+SL+IPIYYK T+P+EDYR+HQ GVKWLCTLVLQI QICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIE++LTGEIRNFINPPNMQLLTISVLFGLS+IDPVRRLKFSPMAQSSAPM RAVLR+SA+K QK R
Sbjct:    1 MTFGVYCLVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPANYFTNNLLVFFVTFSIASCYISRVIRLAVGFHPKLRRSMPKLMSEKLLIAVSLSIGVMSLSIPIYYKITVPNEDYRDHQAGVKWLCTLVLQITQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEEELTGEIRNFINPPNMQLLTISVLFGLSVIDPVRRLKFSPMAQSSAPMTRAVLRSSASKTQKPR 252          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: D7G1D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D5_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.180e-32
Identity = 80/172 (46.51%), Postives = 103/172 (59.88%), Query Frame = 1
Query:   10 FKLVFGIAYMTFGLYCLVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAI--VLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREH----QNGVKWLCTLVLQIVQICLLPVVW 507
            F L+FG A +  G   L   F+ R+V EIRARS YLV TLGL LL    +T+D+H +   L G P+N F  +   FF+ FSI SCYI RVIRL V FSP+++R  P +M EKL +  SLSIG +S AIP YY       D  +     +    W+C + L  +Q+CLLPVVW
Sbjct:   28 FHLIFGSAMLVLGTMVLFKMFQYRNVLEIRARSAYLVMTLGLCLL--AALTLDVHVMCRTLLGWPSNVFLVHSGYFFIIFSIESCYIWRVIRLGVSFSPRVKRFIPWVMWEKLAVVSSLSIGAVSTAIPTYYYIEYGGGDDHDRFLAAELDAMWVCHVALISIQLCLLPVVW 197          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: D8LEK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK8_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 6.420e-26
Identity = 84/256 (32.81%), Postives = 134/256 (52.34%), Query Frame = 1
Query:    4 SWFKLVFGIAYMTFGLYCLVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYRE----HQNGVK-WLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEKDLTGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAV 756
            +WF LV     +      + L  + R VFEIRARS  LV  LG   +    + +   ++V+F    N +   +L FF+    + CY SR IRLAV FS   RR  P L SE+  + + L +G  SL  P+Y  + + D  + E     + GV  W  ++  Q + + L P+VW  DD+F+ISREL V+IVL    +  +  F +   + ++  ++N   M  ++ +V+F LS+  P+R+L F P+  S   ++RA+
Sbjct:   60 AWFLLVVSSGLLVVMTGVMFLLIKNRHVFEIRARSACLVMLLGASTMTALAMNMVGQSVVIFNALPNLYTFFMLYFFILVCGSCCYGSRTIRLAVLFSTGTRRVVPWLASERNHVCMCLVLGAGSLGFPLYVMYDVGDGPFAELLFAERAGVLLWRVSIASQAMVLSLYPLVWKTDDIFNISRELRVVIVLTF-STTLIGHFGDNHSSEDVARWVNTRIMGFISATVIFFLSLGLPIRQLVFDPLESSDPRVSRAL 314          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 4.510e-25
Identity = 84/253 (33.20%), Postives = 138/253 (54.55%), Query Frame = 1
Query:   25 GIAYMTFGLYCLVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEKDLTG------EIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVLRN 765
            G  ++  G   LV F+R++ + +IR RS YLV   G+  +L   +TV+    V++    ++F  +LL+FF++ ++   YI R +RLAV F P+++R+ P L+ E   + V L   V  LAIPIY+++T+   D    Q  +  +   VL +   C+ P +  +DDLF IS EL+++       +  + L   +++ G      E R F N  NM ++ + +LFG+SII P+RRL   P+A +    A  VL N
Sbjct:   60 GCCFIVLGTCALVRFYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIV-------TATIVLITSEEVDGQWWGPYERRWFAN--NMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPN 303          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 2.550e-24
Identity = 86/257 (33.46%), Postives = 138/257 (53.70%), Query Frame = 1
Query:   10 FKLVFGIAYMTFGLYCLVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIV-LGLIQSVFVKLFIEKDLTG------EIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVL 759
            F+L  G  ++  G   L  F+R + + +IR RS YLV   G+  +L   +TV+    V++ T  ++F  +L +FF++ ++   YI R +RLAV F P+++R+ P L+ E+  + V L   V  LAIPIY++ T+   D    Q  +  +   VL +   C+ P +  +DDLF IS EL+++   +GLI  V       +++ G      E R   N  N+ +L + VLFG+SI+ P+RRL   P A +    A  VL
Sbjct:   55 FRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIV-------QEIDGLWGGCYERRWLAN--NLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVL 302          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 5.290e-22
Identity = 64/193 (33.16%), Postives = 110/193 (56.99%), Query Frame = 1
Query:  181 VLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEKDLTGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVL 759
            +++ +  ++F  +LL+FFV+ ++   YI R +RLAV F PK +R+ P L+ E+  +AV +      LAIP+Y+++T+   +    Q  +    ++   +VQ C+ P +  +DDLF IS+EL ++    ++ +V  KL  E D  G         N+ LL  +V+F +S++DP+RRL F P+A +    A  VL
Sbjct:   11 IVWDSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKL--EGDYGGVYERRWLGNNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVL 201          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.470e-21
Identity = 75/230 (32.61%), Postives = 125/230 (54.35%), Query Frame = 1
Query:  103 RSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEKDLTGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVLRNSAAKAQKTR 792
            RS +LV   G+ +LL   + V+    V++ +  ++F  +LL+FF++ ++   YI R +RLAV F P+ +R+ P L+ E+  + V L + V  +AIPIY ++T+   +    Q  +     LV  +   C+ P +  +DDLF+IS+EL+++ V  +  +V  K   E     E R   N  N+ +   +VLFG+SI+DP+RRL   P+A +    A  VL +  A     R
Sbjct:    3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVGN--NISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVR 230          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 7.750e-16
Identity = 65/202 (32.18%), Postives = 107/202 (52.97%), Query Frame = 1
Query:  202 NFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVK--LFIEKDL-TGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMA-RAVLRNSAAKAQKTRY 795
            ++F  +LL+F V   +   YI R +RLAV F P+ +++ P L+ E+  +    ++ V  L IPIY   T+   +    Q  +    TLVL     C+ P +  +DDLF+ISREL+++ +L LI ++ +K  L+ E D+ TG         N+     + +FG+S++ P+RRL   P+A S      RAVL     +++   Y
Sbjct:   29 DWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSAMAVALLIIPIYQDMTLEVWEVIAKQVDLLASATLVLAGTLACIFPFIRKVDDLFNISRELIIVTILFLILAIGIKCGLYFEVDMWTGG--------NLNFFITAAVFGVSVVGPLRRLAVDPLAGSKQRCTGRAVLARRETRSEDVSY 222          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 3.600e-11
Identity = 70/226 (30.97%), Postives = 114/226 (50.44%), Query Frame = 1
Query:  100 ARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVI----IVLGLIQSVFVKLFIEKDLTGEI--RNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVL 759
            ARS YLV   G+  LL   +T++    V++    ++F  +LL+F V  ++   YI RV+RLAV F P+ +R+ P L+            G  S A   YY    PD+D                 +   C  P +  +DDLF IS+E++++    ++L + Q+V        D  G +  R +I+  ++ +L ++VLFG+SI+DP+RRL F P+A +    A  +L
Sbjct:    2 ARSAYLVMVEGVCALLTMLVTLNSSINVVWDCGLDYFWVSLLLFLVVPTLLGSYICRVLRLAVVFHPRAKRALPWLIP-----------GGRSDAG--YY----PDDDLS------------AFAVALACTFPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVV-------DKWGGVYERRWIDK-SVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRIL 190          
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.180e-9
Identity = 59/202 (29.21%), Postives = 97/202 (48.02%), Query Frame = 1
Query:  202 NFFANNLLVFFVTFSIASCYISRVIRLAVGFSPKLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVKWLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVK--LFIEKDL-TGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAP-MARAVLRNSAAKAQKTRY 795
            ++F  +LL+F V   +   YI R +RLAV F P+ +++ P L+ E+  +    +  V  L +PIY   T+                              VW +DDLF+ISREL+++ +L LI ++ +K  L+ E D+ TG         N+     + +FG+S++ P+R L   P+A S    M RAVL     +++   Y
Sbjct:   29 DWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLE-----------------------------VWKVDDLFNISRELIIVTILFLILAIGIKCGLYYEVDMWTGG--------NLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSY 193          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1174.1377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KGT8_9PHAE6.140e-15290.87RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G1D5_ECTSI1.180e-3246.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEK8_ECTSI6.420e-2632.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE98_9PHAE4.510e-2533.20RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW0_ECTSI2.550e-2433.46RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LJQ7_ECTSI5.290e-2233.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2T7_ECTSI1.470e-2132.61RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LJQ9_ECTSI7.750e-1632.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTW1_ECTSI3.600e-1130.97RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L7K1_9PHAE3.180e-929.21RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1174contigE-fasciculatus_F_contig1174:15547..19294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionRGS domain
Ec32 orthologEc-18_000030.1
Hectar predicted targeting categorysignal anchor
Exons8
Model size818
Cds size816
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1174.1377.1prot_E-fasciculatus_F_contig1174.1377.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1174 15547..19294 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927685.3766413-CDS-E-fasciculatus_F_contig1174:15546..156501622927685.3766413-CDS-E-fasciculatus_F_contig1174:15546..15650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 15547..15650 +
1695995649.5689847-CDS-E-fasciculatus_F_contig1174:15546..156501695995649.5689847-CDS-E-fasciculatus_F_contig1174:15546..15650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 15547..15650 +
1622927685.388364-CDS-E-fasciculatus_F_contig1174:15859..159771622927685.388364-CDS-E-fasciculatus_F_contig1174:15859..15977Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 15860..15977 +
1695995649.5801694-CDS-E-fasciculatus_F_contig1174:15859..159771695995649.5801694-CDS-E-fasciculatus_F_contig1174:15859..15977Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 15860..15977 +
1622927685.3987246-CDS-E-fasciculatus_F_contig1174:16236..163471622927685.3987246-CDS-E-fasciculatus_F_contig1174:16236..16347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 16237..16347 +
1695995649.5917084-CDS-E-fasciculatus_F_contig1174:16236..163471695995649.5917084-CDS-E-fasciculatus_F_contig1174:16236..16347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 16237..16347 +
1622927685.4093356-CDS-E-fasciculatus_F_contig1174:16760..168461622927685.4093356-CDS-E-fasciculatus_F_contig1174:16760..16846Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 16761..16846 +
1695995649.6018543-CDS-E-fasciculatus_F_contig1174:16760..168461695995649.6018543-CDS-E-fasciculatus_F_contig1174:16760..16846Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 16761..16846 +
1622927685.421091-CDS-E-fasciculatus_F_contig1174:17411..174981622927685.421091-CDS-E-fasciculatus_F_contig1174:17411..17498Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 17412..17498 +
1695995649.6104696-CDS-E-fasciculatus_F_contig1174:17411..174981695995649.6104696-CDS-E-fasciculatus_F_contig1174:17411..17498Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 17412..17498 +
1622927685.4328387-CDS-E-fasciculatus_F_contig1174:17959..180301622927685.4328387-CDS-E-fasciculatus_F_contig1174:17959..18030Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 17960..18030 +
1695995649.6187186-CDS-E-fasciculatus_F_contig1174:17959..180301695995649.6187186-CDS-E-fasciculatus_F_contig1174:17959..18030Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 17960..18030 +
1622927685.4449937-CDS-E-fasciculatus_F_contig1174:18778..188841622927685.4449937-CDS-E-fasciculatus_F_contig1174:18778..18884Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 18779..18884 +
1695995649.6273766-CDS-E-fasciculatus_F_contig1174:18778..188841695995649.6273766-CDS-E-fasciculatus_F_contig1174:18778..18884Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 18779..18884 +
1622927685.4586368-CDS-E-fasciculatus_F_contig1174:19161..192941622927685.4586368-CDS-E-fasciculatus_F_contig1174:19161..19294Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 19162..19294 +
1695995649.636725-CDS-E-fasciculatus_F_contig1174:19161..192941695995649.636725-CDS-E-fasciculatus_F_contig1174:19161..19294Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1174 19162..19294 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1174.1377.1

>prot_E-fasciculatus_F_contig1174.1377.1 ID=prot_E-fasciculatus_F_contig1174.1377.1|Name=mRNA_E-fasciculatus_F_contig1174.1377.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=272bp
FSWFKLVFGIAYMTFGLYCLVLFFRARDVFEIRARSVYLVTTLGLLLLLY
EGITVDLHAIVLFGTPTNFFANNLLVFFVTFSIASCYISRVIRLAVGFSP
KLRRSNPRLMSEKLLIAVSLSIGVISLAIPIYYKFTIPDEDYREHQNGVK
WLCTLVLQIVQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIE
KDLTGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMAR
AVLRNSAAKAQKTRYWYWHLG*
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mRNA from alignment at E-fasciculatus_F_contig1174:15547..19294+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1174.1377.1 ID=mRNA_E-fasciculatus_F_contig1174.1377.1|Name=mRNA_E-fasciculatus_F_contig1174.1377.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3748bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1174:15547..19294+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTCTCATGGTTCAAGCTGGTGTTCGGCATAGCTTACATGACCTTCGGGCT TTACTGCCTGGTGCTATTCTTCCGAGCGCGTGATGTCTTCGAGATCAGGG CAAGGTTAGGCAGCGTTCTGTTATGTTGAATTCAGCGGTGGTTTACAATA CGTGAAATAATATTTTTTAACGAAGCAGCAGCAGCAGCAGCAGGAGCAGT AATCGTTGTTGTTGCCCCCTATCATATCATAGTTCGGCCGTTTTATGTAG CGCCCCACAACCTCCATGCATATCTGATGCACCTTCCACCCCGCCCCGTC CCCGGTTGTCCAGGTCTGTCTACCTCGTTACGACCCTTGGACTGCTGCTG CTCTTGTACGAGGGGATTACGGTGGATCTACACGCCATTGTCCTTTTCGG CACGCCGACCAACTTTTTCGCAAACAATCTGGTGAGATAAGCGCTGGGCT GCTGTCGTGTTGTTGCCGAGACGATGCATACGCACGAGCCAGGGGCTGGG TTGCTTGTGATACATACCGCCCTCAGCGTTGACAGCTTGAGCTGTGTAGG TTTGTCGACGCCCCCGTCTCCCTGTCATTTTGAGTGGTTATGCCCTTCCC CACCATATCCGCGGGTGACAACTATTCCCTCCCACACATCCCAACCCTCT TCTCTTTGCCTGCCTCTTCCTCTGGCTTTTTTTGTTCAAGCTTGTGTTCT TCGTGACGTTCTCTATCGCGAGCTGCTACATCAGCAGAGTCATCCGGCTT GCCGTGGGATTCAGCCCCAAGCTGCGGAGATCGAACCCACGGCTCATGTC GGTGAGAAAGGGGCGAGAGAGGCAGGGAGGGAGTTGAGCGTGTTTCTTCG GGCGGGGGGCGAACCTCCGCGAACGGCTGTGTTGGTTGAACTAACCCGGT TCTCCCAAGATATCAATACGGTGGACGCGACATGCTTATCCAGGCACAAC AGCACACCGTGTGTCTGAAGCAGTCCAGCTGCGGTAGCCGAGGCCATCGG TGTTTTGGGATGGGTGCAGTGCTCAAGAACGTTATAGGTGGACGTAAAAC GCATCATGCATCTGGAGCACGCCATATGTTCGAGCAAAACGTTCGATCGC CGAAGCTACAGCAGTAGGACCTCTGTGACAAGGTCCCTTGATGTTGTGGG CTATCTGCTCTGATGACCGATGACCCTCGATGTTTCTTGCTTTGCCTATG TTCTTGTTTTGCAGGAGAAGCTTCTCATAGCCGTGAGCTTGTCCATCGGT GTGATCTCACTAGCCATCCCGATCTACTACAAGTTCACCATCCCGGACGA GTGAGTGACGGCCCCACATGGGCACTTGGTCGGATGTCGAACTCGAACTC GTGTCTCGGCCACGACTTGTTTGAGACACGGCAGCAATACTGCTGTGCCC CACGTGTCTTTGGACGTATGCTAGCTTGAGTGATTGGTGGGATGGGATGG GGGGGCGCGAACAGGCTGACGTGTAAGATAGCGGAGTATGCCGCTCAGCT CGGCTTAATGCTCGCCTCAGCTCGCTGTCTTGGTTAACATATGCTACATG AAGGGTGTTGCATCAAAAGTGCTTGGGCTGTCAGAATCCTAGCGTAGCCC TCGGCCCCCGGCGTTATAAGGGACGCGGGGAAACCGAGATCCGACCTCCA CGGTCTGTACATGGATGAATGCAAGCGGCGTTGTGCAGTGGGTCTACGGT CACTCATGGTGGCACTTGATTCAACGCCCGCCCCCATCTCCCATCTCCGT CTGTCTGGCTCTTGGTGAATCGTGTCCGGCACGCCTTGGGCGTGGTGCGG TGCGGTGCGGTGCGGTACGGTACGATACGGTGGCATGCTTCTTCCACCTC ATGGATCATCATCAGGGACTACCGCGAGCACCAGAATGGCGTGAAGTGGC TTTGCACCCTGGTGCTGCAGATAGTGCAGATCTGCCTGCTTCCCGTGGTG TGGTGAGTGTCGACGTTGAAAAATCTACGGGTTCCGGCCGGTTGGTTCTA CGTATCTACCCGTCACACCTCTCCGAATCTATCCAAGCACCTTAACCTCC CGACGACATGGGATAAGAAGCTTGTACCCGATCACTCTCCCCACCACTGC ACCAAGCGGGGCAGACGCACACCCCCTACTGTAGCTTGGTCGGCCGTTGT GCTCTTGTGCCGCCACCGCGTCCTTCTTCCTTTGCTTTCATGAACCCAGC GCCATTTCGTTTCCCGCCGGTTGTTACGGCGGGCCCCGAGTATTTTGTCC GTCTGCAAGCCTGTGCTCACGATCGGCCTGTCTTTTTTTGGTATTTTTGC CGATCTGTCGAGTGACTAGAACCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTACGGTCTCTCCCGTGGTTTGCATTATTTCATGTTGT GTGTTACGTGCAGGTACATCGATGACCTGTTTCACATCAGCCGGGAGCTC ATGGTGATCATCGTCCTGGGTCTCATCCAGAGTGGTAAGGAACAGCTGAC GCGTCGCAGTGTGCCCTGCTGAAGCGAAAGATAGGTACCACGCAGGCGGG TGCGAGCGTAGTGCGGCTTGTGTGTGTCTTCTATCTACATATGCCCAGTG AGCTGCAGCCCTGCACTGCGTTACTGTAGATACACACATCGTTTCGTGTG GGGGTTCGAGAAATGTGTTTGTCACATCGCTGGGGGTCGTCCTGTTGGTT GCCTCTCAAAGGCAGCAGCCCCTGCCCAAGGTAGCGCGCCCCACCCCGTG CCGTGCGTGGTTGGGTGTCGCCGCCTTGAGTGATTACACCAGCTTTGCAA CCCTTCACGGGAGGTGCACACCGGAGGAATAAGGCACTCCCCAAAAAACT GAACAATGACGAATATTAAATATAAACAATAATCCAAGTATCGAACACCA CGTGACGTGAAAACTCGCCCTTGGTAACCAAACTTGCATCAGAGGGCCCT GCATCCGATCTGCCGCCGATTTCACTCGTCTGGCGCAGAGTGATGTTGGC CTGCCGTCACCATACCGCCTACAACAGTCCCACCCAGCCAGCTCCTACTG CTTCGTTCAAGGATTGTCTTGCCAACTGCTGTGAAAAGCAACCGAATGTC GCCATGTCACATCCCTCACCTCTCTCGGACGCGTCCCCCGTTTGATTCAG GGGCAGTTTCCGAGGACTTATCGGGTCTGTCTTCGTTCTCCGCTTGTCGT GCCACATATTTCTTTCTCCCGTTCTGTCGCAGTGTTCGTCAAGCTTTTCA TCGAAAAAGACCTGACGGGAGAAATCAGGAACTTCATCAACCCGCCCAAC ATGCAGCTCTTGACAATCTCCGTGTTGTTCGGACTCAGGTGTGTACCGTG CGTGCGTGCTCTTTAACGCAAACGACTTACAAGCCGGTCGTTGGACAGCA CCAGCATGACGATCGATCTCCTCACCAACTCACTGTCCAGCTCGAATCAT GTTCCCCGTTCTAGGGAGAGCAAGGACACAGACGGAGCCGTGAAACGCTG CTTGCTGCTGTAACGCTGTCTACTCGCTCACGATAGATTACACGCTTTTT TTTCTTGTTCGAGAATGTCATTATGTTCTTCCGCTGTACACGTTCGTTGC ACGATTTGGTCGCAGCATCATCGACCCAGTCCGCCGTCTCAAGTTCAGTC CCATGGCCCAGAGCTCGGCTCCCATGGCTCGCGCTGTTCTGAGGAACTCG GCAGCAAAGGCACAAAAAACCAGGTACTGGTACTGGCATCTTGGGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1174:15547..19294+

>mRNA_E-fasciculatus_F_contig1174.1377.1 ID=mRNA_E-fasciculatus_F_contig1174.1377.1|Name=mRNA_E-fasciculatus_F_contig1174.1377.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1632bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1174:15547..19294+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTCTCATGGTTCAAGCTGGTGTTCGGCATAGCTTACATGACCTTCGGGCT
TTACTGCCTGGTGCTATTCTTCCGAGCGCGTGATGTCTTCGAGATCAGGG
CAAGTTCTCATGGTTCAAGCTGGTGTTCGGCATAGCTTACATGACCTTCG
GGCTTTACTGCCTGGTGCTATTCTTCCGAGCGCGTGATGTCTTCGAGATC
AGGGCAAGGTCTGTCTACCTCGTTACGACCCTTGGACTGCTGCTGCTCTT
GTACGAGGGGATTACGGTGGATCTACACGCCATTGTCCTTTTCGGCACGC
CGACCAACTTTTTCGCAAACAATCTGGTCTGTCTACCTCGTTACGACCCT
TGGACTGCTGCTGCTCTTGTACGAGGGGATTACGGTGGATCTACACGCCA
TTGTCCTTTTCGGCACGCCGACCAACTTTTTCGCAAACAATCTGCTTGTG
TTCTTCGTGACGTTCTCTATCGCGAGCTGCTACATCAGCAGAGTCATCCG
GCTTGCCGTGGGATTCAGCCCCAAGCTGCGGAGATCGAACCCACGGCTCA
TGTCGCTTGTGTTCTTCGTGACGTTCTCTATCGCGAGCTGCTACATCAGC
AGAGTCATCCGGCTTGCCGTGGGATTCAGCCCCAAGCTGCGGAGATCGAA
CCCACGGCTCATGTCGGAGAAGCTTCTCATAGCCGTGAGCTTGTCCATCG
GTGTGATCTCACTAGCCATCCCGATCTACTACAAGTTCACCATCCCGGAC
GAGAGAAGCTTCTCATAGCCGTGAGCTTGTCCATCGGTGTGATCTCACTA
GCCATCCCGATCTACTACAAGTTCACCATCCCGGACGAGGACTACCGCGA
GCACCAGAATGGCGTGAAGTGGCTTTGCACCCTGGTGCTGCAGATAGTGC
AGATCTGCCTGCTTCCCGTGGTGTGGGACTACCGCGAGCACCAGAATGGC
GTGAAGTGGCTTTGCACCCTGGTGCTGCAGATAGTGCAGATCTGCCTGCT
TCCCGTGGTGTGGTACATCGATGACCTGTTTCACATCAGCCGGGAGCTCA
TGGTGATCATCGTCCTGGGTCTCATCCAGAGTGGTACATCGATGACCTGT
TTCACATCAGCCGGGAGCTCATGGTGATCATCGTCCTGGGTCTCATCCAG
AGTGTGTTCGTCAAGCTTTTCATCGAAAAAGACCTGACGGGAGAAATCAG
GAACTTCATCAACCCGCCCAACATGCAGCTCTTGACAATCTCCGTGTTGT
TCGGACTCAGTGTTCGTCAAGCTTTTCATCGAAAAAGACCTGACGGGAGA
AATCAGGAACTTCATCAACCCGCCCAACATGCAGCTCTTGACAATCTCCG
TGTTGTTCGGACTCAGCATCATCGACCCAGTCCGCCGTCTCAAGTTCAGT
CCCATGGCCCAGAGCTCGGCTCCCATGGCTCGCGCTGTTCTGAGGAACTC
GGCAGCAAAGGCACAAAAAACCAGGTACTGGTACTGGCATCTTGGGTGAC
ATCATCGACCCAGTCCGCCGTCTCAAGTTCAGTCCCATGGCCCAGAGCTC
GGCTCCCATGGCTCGCGCTGTTCTGAGGAACTCGGCAGCAAAGGCACAAA
AAACCAGGTACTGGTACTGGCATCTTGGGTGA
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