prot_E-fasciculatus_F_contig11729.1366.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11729.1366.1
Unique Nameprot_E-fasciculatus_F_contig11729.1366.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length52
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11729.1366.1 vs. uniprot
Match: D8LFZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFZ4_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 5.960e-27
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 
Query:    1 FADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDR 49
            FADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDR
Sbjct:  536 FADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDR 584
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BLAST of mRNA_E-fasciculatus_F_contig11729.1366.1 vs. uniprot
Match: A0A836C9J1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9J1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.060e-13
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0 
Query:    1 FADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDR 49
            FA+HLK+TE+KWPFW+HW  V++ Q D+ QR+FV   L  LV+LSY DR
Sbjct:  501 FANHLKDTEFKWPFWQHWAGVLQEQRDHPQRMFVEMALDMLVRLSYRDR 549
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11729.1366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFZ4_ECTSI5.960e-27100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9J1_9STRA7.060e-1359.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..51
e-value: 1.7E-12
score: 49.2
IPR015172MIF4G-like, type 1PFAMPF09088MIF4G_likecoord: 1..49
e-value: 2.1E-8
score: 34.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11729contigE-fasciculatus_F_contig11729:641..796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11729.1366.1mRNA_E-fasciculatus_F_contig11729.1366.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11729 641..796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11729.1366.1 ID=prot_E-fasciculatus_F_contig11729.1366.1|Name=mRNA_E-fasciculatus_F_contig11729.1366.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=52bp
FADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRY
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR015172MIF4G-like_typ-1
IPR016021MIF4-like_sf